Extension of the QuickFF force field protocol for an improved accuracy of structural, vibrational, mechanical and thermal properties of metal–organic frameworks
暂无分享,去创建一个
Louis Vanduyfhuys | Steven Vandenbrande | Toon Verstraelen | Michel Waroquier | Veronique Van Speybroeck | Jelle Wieme | T. Verstraelen | L. Vanduyfhuys | M. Waroquier | S. Vandenbrande | J. Wieme | V. Speybroeck | Jelle Wieme
[1] S. Grimme,et al. A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu. , 2010, The Journal of chemical physics.
[2] E. Cockayne. Thermodynamics of the Flexible Metal-Organic Framework Material MIL-53(Cr) From First Principles. , 2017, The journal of physical chemistry. C, Nanomaterials and interfaces.
[3] G. Kresse,et al. Efficiency of ab-initio total energy calculations for metals and semiconductors using a plane-wave basis set , 1996 .
[4] Peter G. Boyd,et al. Force-Field Prediction of Materials Properties in Metal-Organic Frameworks , 2016, The journal of physical chemistry letters.
[5] S. L. Mayo,et al. DREIDING: A generic force field for molecular simulations , 1990 .
[6] T. K. Roy,et al. MOF‐FF – A flexible first‐principles derived force field for metal‐organic frameworks , 2013 .
[7] T. Verstraelen,et al. Ab Initio Parametrized Force Field for the Flexible Metal-Organic Framework MIL-53(Al). , 2012, Journal of chemical theory and computation.
[8] J. Simpson,et al. Origin of the Exceptional Negative Thermal Expansion in Metal-Organic Framework-5 Zn 4 O(1,4-benzenedicarboxylate) 3 , 2008 .
[9] S. Rogge,et al. Exploring the Flexibility of MIL-47(V)-Type Materials Using Force Field Molecular Dynamics Simulations , 2016, The journal of physical chemistry. C, Nanomaterials and interfaces.
[10] Kresse,et al. Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set. , 1996, Physical review. B, Condensed matter.
[11] S. Kaskel,et al. Flexible metal-organic frameworks. , 2014, Chemical Society reviews.
[12] Krista S. Walton,et al. Exceptional negative thermal expansion in isoreticular metal-organic frameworks. , 2007, Angewandte Chemie.
[13] Gérard Férey,et al. Hybrid porous solids: past, present, future. , 2008, Chemical Society reviews.
[14] S. Grimme. A General Quantum Mechanically Derived Force Field (QMDFF) for Molecules and Condensed Phase Simulations. , 2014, Journal of chemical theory and computation.
[15] C. Serre,et al. Mechanical properties of a gallium fumarate metal–organic framework: a joint experimental-modelling exploration , 2017 .
[16] Anthony K. Cheetham,et al. Mechanical properties of hybrid inorganic-organic framework materials: establishing fundamental structure-property relationships. , 2011, Chemical Society reviews.
[17] Michael J. Frisch,et al. Self‐consistent molecular orbital methods 25. Supplementary functions for Gaussian basis sets , 1984 .
[18] T. Verstraelen,et al. A Comparison of Barostats for the Mechanical Characterization of Metal-Organic Frameworks. , 2015, Journal of chemical theory and computation.
[19] Stefan Grimme,et al. Effect of the damping function in dispersion corrected density functional theory , 2011, J. Comput. Chem..
[20] Kurt Kremer,et al. Computer Simulations of Soft Matter: Linking the Scales , 2014, Entropy.
[21] A. J. Blake,et al. Selectivity and direct visualization of carbon dioxide and sulfur dioxide in a decorated porous host. , 2012, Nature chemistry.
[22] Saeed Amirjalayer,et al. Molecular dynamics simulation of benzene diffusion in MOF-5: importance of lattice dynamics. , 2007, Angewandte Chemie.
[23] J. Pople,et al. Self‐consistent molecular orbital methods. XX. A basis set for correlated wave functions , 1980 .
[24] Florian Müller-Plathe,et al. Coarse-grained modeling for macromolecular chemistry. , 2012, Topics in current chemistry.
[25] T. Verstraelen,et al. Methane Adsorption in Zr-Based MOFs: Comparison and Critical Evaluation of Force Fields , 2017, The journal of physical chemistry. C, Nanomaterials and interfaces.
[26] B. Smit,et al. On the Thermodynamics of Framework Breathing: A Free Energy Model for Gas Adsorption in MIL-53 , 2013 .
[27] Michael O’Keeffe,et al. The Chemistry and Applications of Metal-Organic Frameworks , 2013, Science.
[28] A. Ghoufi,et al. Adsorption of light hydrocarbons in the flexible MIL-53(Cr) and rigid MIL-47(V) metal-organic frameworks: a combination of molecular simulations and microcalorimetry/gravimetry measurements. , 2010, Physical chemistry chemical physics : PCCP.
[29] C. Serre,et al. Mechanical energy storage performance of an aluminum fumarate metal–organic framework† †Electronic supplementary information (ESI) available: Experimental procedures, X-ray diffraction, and molecular simulation. See DOI: 10.1039/c5sc02794b , 2015, Chemical science.
[30] C. Kepert,et al. Elucidating Negative Thermal Expansion in MOF-5 , 2010 .
[31] F. Corà,et al. Sorption-Induced Breathing in the Flexible Metal Organic Framework CrMIL-53: Force-Field Simulations and Electronic Structure Analysis , 2009 .
[32] W. Goddard,et al. UFF, a full periodic table force field for molecular mechanics and molecular dynamics simulations , 1992 .
[33] T. Heine,et al. Extension of the Universal Force Field to Metal-Organic Frameworks. , 2014, Journal of chemical theory and computation.
[34] Ming-Jing Hwang,et al. Derivation of class II force fields. I. Methodology and quantum force field for the alkyl functional group and alkane molecules , 1994, J. Comput. Chem..
[35] Norman L. Allinger,et al. Molecular mechanics. The MM3 force field for hydrocarbons. 1 , 1989 .
[36] R. Schmid,et al. Hypothetical 3D-periodic covalent organic frameworks: exploring the possibilities by a first principles derived force field , 2013 .
[37] A. Becke. Density-functional thermochemistry. III. The role of exact exchange , 1993 .
[38] R. Schmid,et al. Model Study of Thermoresponsive Behavior of Metal–Organic Frameworks Modulated by Linker Functionalization , 2016 .
[39] Maciej Haranczyk,et al. Computation-Ready, Experimental Metal–Organic Frameworks: A Tool To Enable High-Throughput Screening of Nanoporous Crystals , 2014 .
[40] Pedro Alexandrino Fernandes,et al. General performance of density functionals. , 2007, The journal of physical chemistry. A.
[41] Peter G. Boyd,et al. Computational development of the nanoporous materials genome , 2017 .
[42] F. Paesani,et al. Molecular-level characterization of the breathing behavior of the jungle-gym-type DMOF-1 metal-organic framework. , 2012, Journal of the American Chemical Society.
[43] François-Xavier Coudert,et al. Recent advances in the computational chemistry of soft porous crystals. , 2017, Chemical communications.
[44] V. V. Speybroeck,et al. The Monomer Electron Density Force Field (MEDFF): A Physically Inspired Model for Noncovalent Interactions. , 2017, Journal of chemical theory and computation.
[45] G. Kearley,et al. Scrutinizing negative thermal expansion in MOF-5 by scattering techniques and ab initio calculations. , 2013, Dalton transactions.
[46] A. Walsh,et al. Transferable Force Field for Metal–Organic Frameworks from First-Principles: BTW-FF , 2014, Journal of chemical theory and computation.
[47] T. Verstraelen,et al. Thermodynamic Insight in the High-Pressure Behavior of UiO-66: Effect of Linker Defects and Linker Expansion , 2016, Chemistry of materials : a publication of the American Chemical Society.
[48] Parr,et al. Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. , 1988, Physical review. B, Condensed matter.
[49] D. Osguthorpe,et al. Structure and energetics of ligand binding to proteins: Escherichia coli dihydrofolate reductase‐trimethoprim, a drug‐receptor system , 1988, Proteins.
[50] Stefan Grimme,et al. Semiempirical GGA‐type density functional constructed with a long‐range dispersion correction , 2006, J. Comput. Chem..
[51] R. Schmid,et al. Coarse graining of force fields for metal-organic frameworks. , 2016, Dalton transactions.
[52] A. Ghoufi,et al. Molecular dynamics simulations of breathing MOFs: structural transformations of MIL-53(Cr) upon thermal activation and CO2 adsorption. , 2008, Angewandte Chemie.
[53] Susumu Kitagawa,et al. Functional porous coordination polymers. , 2004, Angewandte Chemie.
[54] R. Schmid,et al. Dioxygen binding to Fe-MOF-74: microscopic insights from periodic QM/MM calculations , 2016 .
[55] C. Serre,et al. Diffusion of Binary CO2/CH4 Mixtures in the MIL-47(V) and MIL-53(Cr) Metal–Organic Framework Type Solids: A Combination of Neutron Scattering Measurements and Molecular Dynamics Simulations , 2013 .
[56] A. D. McLean,et al. Contracted Gaussian basis sets for molecular calculations. I. Second row atoms, Z=11–18 , 1980 .
[57] J. Soler,et al. Flexibility in a metal-organic framework material controlled by weak dispersion forces: the bistability of MIL-53(Al). , 2010, Angewandte Chemie.
[58] Krista S. Walton,et al. Flexible Force Field Parameterization through Fitting on the Ab Initio-Derived Elastic Tensor , 2017, Journal of chemical theory and computation.
[59] Lennox E. Iton,et al. An assessment of density functional methods for studying molecular adsorption in cluster models of zeolites , 1998 .
[60] Aron Walsh,et al. A general forcefield for accurate phonon properties of metal-organic frameworks. , 2016, Physical chemistry chemical physics : PCCP.
[61] A. Becke,et al. Density-functional exchange-energy approximation with correct asymptotic behavior. , 1988, Physical review. A, General physics.
[62] François-Xavier Coudert,et al. Prediction of flexibility of metal-organic frameworks CAU-13 and NOTT-300 by first principles molecular simulations. , 2014, Chemical communications.
[63] Burke,et al. Generalized Gradient Approximation Made Simple. , 1996, Physical review letters.
[64] D. Sholl,et al. DFT-Derived Force Fields for Modeling Hydrocarbon Adsorption in MIL-47(V). , 2015, Langmuir : the ACS journal of surfaces and colloids.
[65] R. Schmid,et al. Multiscale Modeling of the HKUST-1/Poly(vinyl alcohol) Interface: From an Atomistic to a Coarse Graining Approach , 2017 .
[66] C. Serre,et al. The new age of MOFs and of their porous-related solids. , 2017, Chemical Society reviews.
[67] G. Voth. Coarse-Graining of Condensed Phase and Biomolecular Systems , 2008 .
[68] S. Rogge,et al. Semi-analytical mean-field model for predicting breathing in metal–organic frameworks , 2015 .
[69] P. Guerrier,et al. Aluminum-1,4-cyclohexanedicarboxylates: high-throughput and temperature-dependent in situ EDXRD studies. , 2013, Inorganic chemistry.
[70] Rochus Schmid,et al. Systematic first principles parameterization of force fields for metal-organic frameworks using a genetic algorithm approach. , 2009, The journal of physical chemistry. B.
[71] Rochus Schmid,et al. Ab initio parametrized MM3 force field for the metal‐organic framework MOF‐5 , 2007, J. Comput. Chem..
[72] Louis Vanduyfhuys,et al. QuickFF: A program for a quick and easy derivation of force fields for metal‐organic frameworks from ab initio input , 2015, J. Comput. Chem..
[73] Maciej Haranczyk,et al. The Influence of Intrinsic Framework Flexibility on Adsorption in Nanoporous Materials , 2017, Journal of the American Chemical Society.