Robust Unmixing of Dynamic Sequences Using Regions of Interest

In dynamic planar imaging, extraction of signals specific to structures is complicated by structures superposition. Due to overlapping, signals extraction with classic regions of interest (ROIs) methods suffers from inaccuracy, as extracted signals are a mixture of targeted signals. Partial volume effect raises the same issue in dynamic tomography. Source separation methods, such as factor analysis of dynamic sequences, have been developed to unmix such data. However, the underlying problem is underdetermined and the model used is not relevant in the whole image. This non-uniqueness issue was overcome by introducing prior knowledge, such as sparsity or smoothness, in the separation model. In practice, these methods are barely used because of the lack of reliability of their results. Previously developed methods aimed to be fully automatic, but efficiency can be improved with additional prior knowledge. Some methods using ROIs knowledge in a straightforward way have been proposed. In this paper, we propose an unmixing method, based on an objective function minimization and integrating these ROIs in a different and robust manner. The objective function promotes consistent solutions regarding ROIs while relaxing the model outside ROIs. In order to reduce user-dependent effects, ROIs are used as soft constraints in a robust way through the use of a distance matrix. Consistency, effectiveness, and robustness to the ROIs selection are demonstrated on a toy example, a highly realistic simulated renography data set and a clinical data set. Performance is compared with the competitive methods.

[1]  D. C. Barber,et al.  The Importance of Constraints in Factor Analysis of Dynamic Studies , 1988 .

[2]  V. Šmídl,et al.  The Variational Bayes Method in Signal Processing , 2005 .

[3]  Rune Sixt,et al.  Guidelines for standard and diuretic renogram in children , 2011, European Journal of Nuclear Medicine and Molecular Imaging.

[4]  A Herment,et al.  Spatial regularization applied to factor analysis of medical image sequences (FAMIS). , 1999, Physics in medicine and biology.

[5]  M Sámal,et al.  On the existence of an unambiguous solution in factor analysis of dynamic studies. , 1989, Physics in medicine and biology.

[6]  Václav Smídl,et al.  Bayesian Blind Separation and Deconvolution of Dynamic Image Sequences Using Sparsity Priors , 2015, IEEE Transactions on Medical Imaging.

[7]  W. Segars,et al.  4D XCAT phantom for multimodality imaging research. , 2010, Medical physics.

[8]  G. Cheon,et al.  Quantification of Regional Myocardial Blood Flow Using Dynamic H 2 15 O Pet and Factor Analysis , 2001 .

[9]  R. Huesman,et al.  Direct least-squares estimation of spatiotemporal distributions from dynamic SPECT projections using a spatial segmentation and temporal B-splines , 2000, IEEE Transactions on Medical Imaging.

[10]  P. Perret,et al.  Nuclear Imaging of Glucose Transport/Metabolism – An Interesting Tool to Screen Insulin Resistance, Refine Diagnosis of Type 2 Diabetes, Understand Disease Mechanisms, and/or Evaluate New Therapies , 2011 .

[11]  Chong-Yung Chi,et al.  Tissue-Specific Compartmental Analysis for Dynamic Contrast-Enhanced MR Imaging of Complex Tumors , 2011, IEEE Transactions on Medical Imaging.

[12]  M E Phelps,et al.  Factor analysis for extraction of blood time-activity curves in dynamic FDG-PET studies. , 1995, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.

[13]  D. Barber The use of principal components in the quantitative analysis of gamma camera dynamic studies. , 1980, Physics in medicine and biology.

[14]  H. Sebastian Seung,et al.  Algorithms for Non-negative Matrix Factorization , 2000, NIPS.

[15]  Václav Smídl,et al.  Sparsity in Bayesian Blind Source Separation and Deconvolution , 2013, ECML/PKDD.

[16]  A S Houston,et al.  The effect of apex-finding errors on factor images obtained from factor analysis and oblique transformation. , 1984, Physics in medicine and biology.

[17]  Michael W. Berry,et al.  Algorithms and applications for approximate nonnegative matrix factorization , 2007, Comput. Stat. Data Anal..

[18]  P. Paatero,et al.  Positive matrix factorization: A non-negative factor model with optimal utilization of error estimates of data values† , 1994 .

[19]  Václav Smídl,et al.  Automatic regions of interest in factor analysis for dynamic medical imaging , 2012, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI).

[20]  Grant T Gullberg,et al.  Dynamic single photon emission computed tomography—basic principles and cardiac applications , 2010, Physics in medicine and biology.

[21]  J. P. Bazin,et al.  Handling of Dynamic Sequences in Nuclear Medicine , 1982, IEEE Transactions on Nuclear Science.

[22]  Anne L. Martel,et al.  Hepatic Perfusion Imaging Using Factor Analysis of Contrast Enhanced Ultrasound , 2008, IEEE Transactions on Medical Imaging.

[23]  Richard M. Leahy,et al.  Continuous Time Dynamic PET Imaging Using List Mode Data , 1999, IPMI.

[24]  Marc Filippi,et al.  A priori spatiaux et analyse factorielle de séquences scintigraphiques , 2015 .

[25]  Debasis Mitra,et al.  Reconstruction of 4-D Dynamic SPECT Images From Inconsistent Projections Using a Spline Initialized FADS Algorithm (SIFADS) , 2015, IEEE Transactions on Medical Imaging.

[26]  Ronald H. Huesman,et al.  Correction for ambiguous solutions in factor analysis using a penalized least squares objective , 2002, IEEE Transactions on Medical Imaging.

[27]  Michael Ljungberg,et al.  Dynamic (99m)Tc-MAG3 renography: images for quality control obtained by combining pharmacokinetic modelling, an anthropomorphic computer phantom and Monte Carlo simulated scintillation camera imaging. , 2013, Physics in medicine and biology.

[28]  Frédérique Frouin,et al.  Foundations of Factor Analysis of Medical Image Sequences: A Unified Approach and Some Practical Implications , 1993, IPMI.

[29]  E. Polak,et al.  Note sur la convergence de méthodes de directions conjuguées , 1969 .

[30]  Michel Desvignes,et al.  Factor Analysis of Dynamic Sequence with Spatial Prior for 2D Cardiac Spect Sequences Analysis , 2016, ACIVS.

[31]  Ji Zhang,et al.  Quantitative Evaluation of Two-Factor Analysis Applied to Hepatic Perfusion Study Using Contrast-enhanced Ultrasound , 2013, IEEE Transactions on Biomedical Engineering.