Pre-steady-state kinetic analysis of sequence-dependent nucleotide excision by the 3'-exonuclease activity of bacteriophage T4 DNA polymerase.
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J M Beechem | R. Eritja | J. Beechem | L. Bloom | M. Goodman | M F Goodman | L J Reha-Krantz | L B Bloom | M. R. Otto | L. Reha-Krantz | M R Otto | R Eritja
[1] D C Ward,et al. Fluorescence studies of nucleotides and polynucleotides. I. Formycin, 2-aminopurine riboside, 2,6-diaminopurine riboside, and their derivatives. , 1969, The Journal of biological chemistry.
[2] M. Bessman,et al. Studies on the biochemical basis of spontaneous mutation. V. Effect of temperature on mutation frequency. , 1974, Journal of molecular biology.
[3] G. Weber,et al. Determination of the absolute quantum yield of fluorescent solutions , 1957 .
[4] S. Benkovic,et al. DNA substrate structural requirements for the exonuclease and polymerase activities of procaryotic and phage DNA polymerases. , 1989, Biochemistry.
[5] A. Kornberg,et al. Enzymatic Synthesis of Deoxyribonucleic Acid XXXVI. A PROOFREADING FUNCTION FOR THE 3' → 5' EXONUCLEASE ACTIVITY IN DEOXYRIBONUCLEIC ACID POLYMERASES , 1972 .
[6] N. Muzyczka,et al. Studies on the biochemical basis of spontaneous mutation. II. The incorporation of a base and its analogue into DNA by wild-type, mutator and antimutator DNA polymerases. , 1974, Journal of molecular biology.
[7] M. Goodman,et al. On the molecular basis of transition mutations. Frequency of forming 2-aminopurine-cytosine base mispairs in the G X C----A X T mutational pathway by T4 DNA polymerase in vitro. , 1984, The Journal of biological chemistry.
[8] C. M. Joyce,et al. Reactions at the polymerase active site that contribute to the fidelity of Escherichia coli DNA polymerase I (Klenow fragment). , 1992, The Journal of biological chemistry.
[9] S. Benkovic,et al. Construction and characterization of a bacteriophage T4 DNA polymerase deficient in 3'-->5' exonuclease activity. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[10] A. Fersht,et al. Kinetic basis of spontaneous mutation. Misinsertion frequencies, proofreading specificities and cost of proofreading by DNA polymerases of Escherichia coli. , 1982, Journal of molecular biology.
[11] M. Bessman,et al. Influence of local nucleotide sequence on substitution of 2-aminopurine for adenine during deoxyribonucleic acid synthesis in vitro. , 1983, Biochemistry.
[12] M. Goodman,et al. On the molecular basis of transition mutations: frequencies of forming 2-aminopurine.cytosine and adenine.cytosine base mispairs in vitro. , 1981, Proceedings of the National Academy of Sciences of the United States of America.
[13] M. Goodman,et al. Asymmetry in forming 2-aminopurine . hydroxymethylcytosine heteroduplexes; A model giving misincorporation frequencies and rounds of DNA replication from base-pair populations in vivo. , 1979, Journal of molecular biology.
[14] R. Eritja,et al. Base pairing and mutagenesis: observation of a protonated base pair between 2-aminopurine and cytosine in an oligonucleotide by proton NMR. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[15] S. Benkovic,et al. Kinetic characterization of the polymerase and exonuclease activities of the gene 43 protein of bacteriophage T4. , 1992, Biochemistry.
[16] R. Eritja,et al. NMR studies on an oligodeoxynucleotide containing 2-aminopurine opposite adenine. , 1987, Biochemistry.
[17] P. V. von Hippel,et al. Structure and function of the bacteriophage T4 DNA polymerase holoenzyme. , 1992, Biochemistry.
[18] L. Nilsson,et al. Structure and dynamics of a fluorescent DNA oligomer containing the EcoRI recognition sequence: fluorescence, molecular dynamics, and NMR studies. , 1989, Biochemistry.
[19] D. Galas,et al. Error induction and correction by mutant and wild type T4 DNA polymerases. Kinetic error discrimination mechanisms. , 1979, The Journal of biological chemistry.
[20] B F Peterman,et al. Measurement of the dead time of a fluorescence stopped-flow instrument. , 1979, Analytical biochemistry.
[21] L. Reha-Krantz,et al. Genetic and biochemical studies of bacteriophage T4 DNA polymerase 3'-->5'-exonuclease activity. , 1993, The Journal of biological chemistry.
[22] R. Eritja,et al. Synthesis and properties of defined DNA oligomers containing base mispairs involving 2-aminopurine. , 1986, Nucleic acids research.
[23] M. O’Donnell,et al. Specificity and enzymatic mechanism of the editing exonuclease of Escherichia coli DNA polymerase III. , 1991, The Journal of biological chemistry.
[24] N. Muzyczka,et al. Studies on the biochemical basis of spontaneous mutation. I. A comparison of the deoxyribonucleic acid polymerases of mutator, antimutator, and wild type strains of bacteriophage T4. , 1972, The Journal of biological chemistry.
[25] T. Steitz,et al. Structure of DNA polymerase I Klenow fragment bound to duplex DNA , 1993, Science.
[26] K. Mielenz,et al. Polarization Effects on Fluorescence Measurements. , 1975, Journal of research of the National Bureau of Standards. Section A, Physics and chemistry.
[27] M. Goodman,et al. Influence of neighboring bases on DNA polymerase insertion and proofreading fidelity. , 1985, The Journal of biological chemistry.
[28] W. Konigsberg,et al. DNA polymerization in the absence of exonucleolytic proofreading: in vivo and in vitro studies. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[29] J. Beechem,et al. Influence of 5'-nearest neighbors on the insertion kinetics of the fluorescent nucleotide analog 2-aminopurine by Klenow fragment. , 1993, Biochemistry.
[30] Smita S. Patel,et al. Kinetic partitioning between the exonuclease and polymerase sites in DNA error correction. , 1991, Biochemistry.
[31] E. Freese. The specific mutagenic effect of base analogues on Phage T4 , 1959 .
[32] M. Boosalis,et al. Nearest neighbor influences on DNA polymerase insertion fidelity. , 1989, The Journal of biological chemistry.
[33] Characterization of the high pH wobble structure of the 2-aminopurine.cytosine mismatch by N-15 NMR spectroscopy. , 1989, Biochemical and biophysical research communications.
[34] P. V. von Hippel,et al. Processive proofreading is intrinsic to T4 DNA polymerase. , 1992, The Journal of biological chemistry.
[35] J. Hsieh,et al. Kinetic mechanism of the DNA-dependent DNA polymerase activity of human immunodeficiency virus reverse transcriptase. , 1993, The Journal of biological chemistry.
[36] L. Reha-Krantz,et al. Bacteriophage T4 DNA polymerase mutations that confer sensitivity to the PPi analog phosphonoacetic acid , 1993, Journal of virology.
[37] T. Kunkel. Misalignment-mediated DNA synthesis errors. , 1990, Biochemistry.
[38] Ludwig Brand,et al. [17] Time-resolved fluorescence measurements , 1979 .