Characterization of the FB-NOF transposable element of Drosophila melanogaster.

FB-NOF is a composite transposable element of Drosophila melanogaster. It is composed of foldback sequences, of variable length, which flank a 4-kb NOF sequence with 308-bp inverted repeat termini. The NOF sequence could potentially code for a 120-kD polypeptide. The FB-NOF element is responsible for unstable mutations of the white gene (wc and wDZL) and is associated with the large TEs of G. Ising. Although most strains of D. melanogaster have 20-30 sites of FB insertion, FB-NOF elements are usually rare, many strains lack this composite element or have only one copy of it. A few strains, including wDZL and Basc have many (8-21) copies of FB-NOF, and these show a tendency to insert at "hot-spots." These strains also have an increased number of FB elements. The DNA sequence of the NOF region associated with TE146(Z) has been determined.

[1]  T. Eickbush,et al.  Type I (R1) and type II (R2) ribosomal DNA insertions of Drosophila melanogaster are retrotransposable elements closely related to those of Bombyx mori. , 1990, Journal of molecular biology.

[2]  D C Shields,et al.  Evidence that mutation patterns vary among Drosophila transposable elements. , 1989, Journal of molecular biology.

[3]  Ronald H. A. Plasterk,et al.  Related transposons in C.elegans and D.melanogaster , 1988, Nucleic Acids Res..

[4]  Linda J. Harris,et al.  Sequence identity between an inverted repeat family of transposable elements in Drosophila and Caenorhabditis , 1988, Nucleic Acids Res..

[5]  D. Lipman,et al.  Improved tools for biological sequence comparison. , 1988, Proceedings of the National Academy of Sciences of the United States of America.

[6]  M. Ashburner,et al.  Interactions between WHITE Genes Carried by a Large Transposing Element and the ZESTE Allele in DROSOPHILA MELANOGASTER. , 1986, Genetics.

[7]  M. Ashburner,et al.  Spontaneous excision of a large composite transposable element of Drosophila melanogaster , 1985, Nature.

[8]  S. Potter,et al.  Distinct characteristics of loop sequences of two Drosophila foldback transposable elements. , 1985, Nucleic acids research.

[9]  G M Rubin,et al.  DNA sequence of the white locus of Drosophila melanogaster. , 1984, Journal of molecular biology.

[10]  G. Rubin,et al.  Structure of chromosomal rearrangements induced by the FB transposable element in Drosophila , 1984, Nature.

[11]  J. Devereux,et al.  A comprehensive set of sequence analysis programs for the VAX , 1984, Nucleic Acids Res..

[12]  J. Brookfield,et al.  Apparent absence of transposable elements related to the P elements of D. melanogaster in other species of Drosophila , 1984, Nature.

[13]  R. Paro,et al.  Molecular analysis of large transposable elements carrying the white locus of Drosophila melanogaster , 1983, The EMBO journal.

[14]  G. Rubin,et al.  High-frequency precise excision of the Drosophila foldback transposable element , 1983, Nature.

[15]  G. Rubin,et al.  The unstable w dzl mutation of Drosophila is caused by a 13 kilobase insertion that is imprecisely excised in phenotypic revertants , 1982, Cell.

[16]  P. Bingham,et al.  Regulation of white locus expression: The structure of mutant alleles at the white locus of Drosophila melanogaster , 1982, Cell.

[17]  G. Rubin,et al.  Structure of the drosophila mutable allele, white-crimson, and its white-ivory and wild-type derivatives , 1982, Cell.

[18]  S. Potter,et al.  DNA sequence of a foldback transposable element in Drosophila , 1982, Nature.

[19]  R. Paro,et al.  Molecular cloning of the white locus region of Drosophila melanogaster using a large transposable element , 1982, The EMBO journal.

[20]  G. Rubin,et al.  Physical map of the white locus of Drosophila melanogaster. , 1982, Proceedings of the National Academy of Sciences of the United States of America.

[21]  D. Finnegan,et al.  Transposable elements in Drosophila melanogaster. , 1982, Oxford surveys on eukaryotic genes.

[22]  S. Potter,et al.  Unusual structure of the FB family of transposable elements in Drosophila , 1981, Cell.

[23]  K. Block,et al.  Derivation-dependent distribution of insertion sites for a Drosophila transposon. , 1981, Cold Spring Harbor symposia on quantitative biology.

[24]  C. A. Thomas,et al.  Molecular cloning. , 1977, Advances in pathobiology.

[25]  C. Schmid,et al.  Inverted repeat sequences in the drosophila genome , 1975, Cell.

[26]  M. M. Green Controlling element mediated transpositions of the white gene in Drosophila melanogaster. , 1969, Genetics.

[27]  P. Levene On the preparation of nucleic acids , 1900 .