An Analytical Model for Estimating Water Exchange Rate in White Matter Using Diffusion MRI

Substantial effort is being expended on using micro-structural modeling of the white matter, with the goal of relating diffusion weighted magnetic resonance imaging (DWMRI) to the underlying structure of the tissue, such as axonal density. However, one of the important parameters affecting diffusion is the water exchange rate between the intra- and extra-axonal space, which has not been fully investigated and is a crucial marker of brain injury such as multiple sclerosis (MS), stroke, and traumatic brain injury (TBI). To our knowledge, there is no diffusion analytical model which includes the Water eXchange Rate (WXR) without the requirement of short gradient pulse (SGP) approximation. We therefore propose a new analytical model by deriving the diffusion signal for a permeable cylinder, assuming a clinically feasible pulse gradient spin echo (PGSE) sequence. Simulations based on Markov Random Walk confirm that the exchange parameter included in our model has a linear correlation (R2>0.88) with the actual WXR. Moreover, increasing WXR causes the estimated values of diameter and volume fraction of the cylinders to increase and decrease, respectively, which is consistent with our findings from histology measurements in tissues near TBI regions. This model was also applied to the diffusion signal acquired from ex vivo brains of 14 male (10 TBI and 4 normal) rats using hybrid diffusion imaging. The estimated values of axon diameter and axonal volume fraction are in agreement with their corresponding histological measurements in normal brains, with 0.96 intra-class correlation coefficient value resulting from consistency analysis. Moreover, a significant increase (p = 0.001) in WXR and diameter and decrease in axonal volume fraction in the TBI boundary were detected in the TBI rats compared with the normal rats.

[1]  P. Basser,et al.  New modeling and experimental framework to characterize hindered and restricted water diffusion in brain white matter , 2004, Magnetic resonance in medicine.

[2]  Hamid Soltanian-Zadeh,et al.  Evaluation of diffusion models of fiber tracts using diffusion tensor magnetic resonance imaging. , 2011, Magnetic resonance imaging.

[3]  R. Hurley,et al.  Common data elements in radiologic imaging of traumatic brain injury , 2010, Journal of magnetic resonance imaging : JMRI.

[4]  T. Mareci,et al.  Generalized diffusion tensor imaging and analytical relationships between diffusion tensor imaging and high angular resolution diffusion imaging , 2003, Magnetic resonance in medicine.

[5]  A. MacKay,et al.  The influence of white matter fibre orientation on MR signal phase and decay , 2011, NMR in biomedicine.

[6]  Andrew L. Alexander,et al.  Hybrid diffusion imaging , 2007, NeuroImage.

[7]  N. Otsu A threshold selection method from gray level histograms , 1979 .

[8]  P. Basser,et al.  Axcaliber: A method for measuring axon diameter distribution from diffusion MRI , 2008, Magnetic resonance in medicine.

[9]  D. Laidlaw,et al.  An Analytical Model of Diffusion and Exchange of Water in White Matter from Diffusion-MRI and its Application in Measuring Axon Radii , 2008 .

[10]  Daniel C. Alexander,et al.  NODDI: Practical in vivo neurite orientation dispersion and density imaging of the human brain , 2012, NeuroImage.

[11]  M. Koch,et al.  A tensor model and measures of microscopic anisotropy for double-wave-vector diffusion-weighting experiments with long mixing times. , 2010, Journal of magnetic resonance.

[12]  Peter J Basser,et al.  Pore diameter mapping using double pulsed-field gradient MRI and its validation using a novel glass capillary array phantom. , 2011, Journal of magnetic resonance.

[13]  V. Wedeen,et al.  Diffusion MRI of Complex Neural Architecture , 2003, Neuron.

[14]  Daniel C Alexander,et al.  Multiple‐Fiber Reconstruction Algorithms for Diffusion MRI , 2005, Annals of the New York Academy of Sciences.

[15]  Peter J Basser,et al.  Modeling diffusion in white matter in the brain: a composite porous medium. , 2005, Magnetic resonance imaging.

[16]  G. Schlaug,et al.  Structural integrity of corticospinal motor fibers predicts motor impairment in chronic stroke , 2010, Neurology.

[17]  B. Vemuri,et al.  Generalized scalar measures for diffusion MRI using trace, variance, and entropy , 2005, Magnetic resonance in medicine.

[18]  Wolfgang Dreher,et al.  Diffusion in compartmental systems. I. A comparison of an analytical model with simulations , 2003, Magnetic resonance in medicine.

[19]  Society of magnetic resonance in medicine , 1990 .

[20]  M. Leibig Random walks and NMR measurements in porous media , 1993 .

[21]  N. Makris,et al.  High angular resolution diffusion imaging reveals intravoxel white matter fiber heterogeneity , 2002, Magnetic resonance in medicine.

[22]  Sebastian Kozerke,et al.  Hochkarätige Auszeichnung für RWTH-Radiologin – Univ.-Prof. Dr. med. Christiane Kuhl erhält Gold-Medaille der International Society of Magnetic Resonance in Medicine (ISMRM) , 2015, RöFo.

[23]  Paul T. Callaghan,et al.  Pulsed-Gradient Spin-Echo NMR for Planar, Cylindrical, and Spherical Pores under Conditions of Wall Relaxation , 1995 .

[24]  A. Torres,et al.  Characterisation of erythrocyte shapes and sizes by NMR diffusion-diffraction of water: correlations with electron micrographs. , 1998, Magnetic resonance imaging.

[25]  Scott N. Hwang,et al.  An image‐based finite difference model for simulating restricted diffusion , 2003, Magnetic resonance in medicine.

[26]  Hui Zhang,et al.  Axon diameter mapping in the presence of orientation dispersion with diffusion MRI , 2011, NeuroImage.

[27]  Daniel C. Alexander A comparison of q-ball and PASMRI on sparse diffusion MRI data , 2004 .

[28]  F. Ståhlberg,et al.  Apparent exchange rate mapping with diffusion MRI , 2011, Magnetic resonance in medicine.

[29]  F. Ståhlberg,et al.  On the effects of a varied diffusion time in vivo: is the diffusion in white matter restricted? , 2009, Magnetic resonance imaging.

[30]  M. Kaste,et al.  Thrombolysis with alteplase 3 to 4.5 hours after acute ischemic stroke. , 2008, The New England journal of medicine.

[31]  P. Callaghan,et al.  Diffraction-like effects in NMR diffusion studies of fluids in porous solids , 1991, Nature.

[32]  Jörg Kärger,et al.  Principles and Application of Self-Diffusion Measurements by Nuclear Magnetic Resonance , 1988 .

[33]  K. Momot Diffusion tensor of water in model articular cartilage , 2010, European Biophysics Journal.

[34]  Timothy Edward John Behrens,et al.  Characterization and propagation of uncertainty in diffusion‐weighted MR imaging , 2003, Magnetic resonance in medicine.

[35]  C.-C. Jay Kuo,et al.  Quantification of self-diffusion process in brain white matter tracts via numerical PDE simulation , 2010, 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

[36]  Bengt Jönsson,et al.  Predictions of pulsed field gradient NMR echo-decays for molecules diffusing in various restrictive geometries. Simulations of diffusion propagators based on a finite element method. , 2003, Journal of magnetic resonance.

[37]  Gareth J. Barker,et al.  Optimal imaging parameters for fiber-orientation estimation in diffusion MRI , 2005, NeuroImage.

[38]  Zhifeng Kou,et al.  The Role of Advanced MR Imaging Findings as Biomarkers of Traumatic Brain Injury , 2010, The Journal of head trauma rehabilitation.

[39]  Lei Wang,et al.  MRI detects white matter reorganization after neural progenitor cell treatment of stroke , 2006, NeuroImage.

[40]  Jeremy D. Schmahmann,et al.  Diffusion spectrum magnetic resonance imaging (DSI) tractography of crossing fibers , 2008, NeuroImage.

[41]  M. Mallar Chakravarty,et al.  Neurite density from magnetic resonance diffusion measurements at ultrahigh field: Comparison with light microscopy and electron microscopy , 2010, NeuroImage.

[42]  K. Hayamizu,et al.  A model for diffusive transport through a spherical interface probed by pulsed-field gradient NMR. , 1998, Biophysical journal.

[43]  M. Chopp,et al.  MRI evaluation of white matter recovery after brain injury. , 2010, Stroke.

[44]  Sean M. Grady,et al.  Clinical trials in head injury. , 2002, Neurological research.

[45]  Michael Chopp,et al.  Comparison of Neurite Density Measured by MRI and Histology after TBI , 2013, PloS one.

[46]  C. H. Neuman Spin echo of spins diffusing in a bounded medium , 1974 .

[47]  J. Helpern,et al.  Monte Carlo study of a two‐compartment exchange model of diffusion , 2010, NMR in biomedicine.

[48]  Guy B. Williams,et al.  Contrast-to-noise ratios for indices of anisotropy obtained from diffusion MRI: A study with standard clinical b-values at 3T , 2011, NeuroImage.

[49]  P. Batchelor,et al.  International Society for Magnetic Resonance in Medicine , 1997 .

[50]  Michael Chopp,et al.  MRI evaluation of axonal reorganization after bone marrow stromal cell treatment of traumatic brain injury , 2011, NMR in biomedicine.

[51]  P. Callaghan,et al.  Diffusion-diffusion correlation and exchange as a signature for local order and dynamics. , 2004, The Journal of chemical physics.

[52]  F. Ståhlberg,et al.  Diffusion‐weighted MRI measurements on stroke patients reveal water‐exchange mechanisms in sub‐acute ischaemic lesions , 2009, NMR in biomedicine.

[53]  M. Nilsson,et al.  Filter-exchange PGSE NMR determination of cell membrane permeability. , 2009, Journal of magnetic resonance.

[54]  Tim B. Dyrby,et al.  Orientationally invariant indices of axon diameter and density from diffusion MRI , 2010, NeuroImage.

[55]  T. Secomb,et al.  Assessment of the effects of cellular tissue properties on ADC measurements by numerical simulation of water diffusion , 2009, Magnetic resonance in medicine.

[56]  Yaniv Assaf,et al.  The effect of rotational angle and experimental parameters on the diffraction patterns and micro-structural information obtained from q-space diffusion NMR: implication for diffusion in white matter fibers. , 2004, Journal of magnetic resonance.

[57]  P. Basser,et al.  In vivo measurement of axon diameter distribution in the corpus callosum of rat brain. , 2009, Brain : a journal of neurology.

[58]  Sriram Vasudevan,et al.  Global white matter analysis of diffusion tensor images is predictive of injury severity in traumatic brain injury. , 2007, Journal of neurotrauma.

[59]  Mark F. Lythgoe,et al.  Compartment models of the diffusion MR signal in brain white matter: A taxonomy and comparison , 2012, NeuroImage.

[60]  D. Tuch Q‐ball imaging , 2004, Magnetic resonance in medicine.

[61]  John C Gore,et al.  Numerical study of water diffusion in biological tissues using an improved finite difference method , 2007, Physics in medicine and biology.

[62]  A. Szafer,et al.  An analytical model of restricted diffusion in bovine optic nerve , 1997, Magnetic resonance in medicine.

[63]  Michael Chopp,et al.  MRI of stroke recovery. , 2010, Stroke.