Homomeric Ring Assemblies of Eukaryotic Sm Proteins Have Affinity for Both RNA and DNA
暂无分享,去创建一个
Nishen Naidoo | Paul M G Curmi | Bridget C Mabbutt | P. Curmi | B. Collins | S. Harrop | I. Dawes | B. C. Mabbutt | Ian W Dawes | G. Kornfeld | Liza Cubeddu | L. Cubeddu | Stephen J Harrop | Brett M Collins | Geoff D Kornfeld | N. Naidoo | B. Mabbutt
[1] R. Lührmann,et al. The snRNP core assembly pathway: identification of stable core protein heteromeric complexes and an snRNP subcore particle in vitro. , 1996, The EMBO journal.
[2] G. Dreyfuss,et al. The Spinal Muscular Atrophy Disease Gene Product, SMN, and Its Associated Protein SIP1 Are in a Complex with Spliceosomal snRNP Proteins , 1997, Cell.
[3] Bertrand Séraphin,et al. Sm and Sm‐like proteins assemble in two related complexes of deep evolutionary origin , 1999, The EMBO journal.
[4] R. Lührmann,et al. snRNP Sm proteins share two evolutionarily conserved sequence motifs which are involved in Sm protein‐protein interactions. , 1995, The EMBO journal.
[5] P. Valentin‐Hansen,et al. Structures of the pleiotropic translational regulator Hfq and an Hfq–RNA complex: a bacterial Sm‐like protein , 2002, The EMBO journal.
[6] B. Séraphin,et al. Interactions within the Yeast Sm Core Complex: from Proteins to Amino Acids , 1998, Molecular and Cellular Biology.
[7] B. Séraphin. Sm and Sm‐like proteins belong to a large family: identification of proteins of the U6 as well as the U1, U2, U4 and U5 snRNPs. , 1995, The EMBO journal.
[8] J. Navaza,et al. AMoRe: an automated package for molecular replacement , 1994 .
[9] G. Storz,et al. The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs. , 2002, Molecular cell.
[10] L. Johnston,et al. Identification and characterization of Uss1p (Sdb23p): a novel U6 snRNA‐associated protein with significant similarity to core proteins of small nuclear ribonucleoproteins. , 1995, The EMBO journal.
[11] Jérôme Basquin,et al. Archaeal Sm proteins form heptameric and hexameric complexes: crystal structures of the Sm1 and Sm2 proteins from the hyperthermophile Archaeoglobus fulgidus. , 2002, Journal of molecular biology.
[12] D. Eisenberg,et al. The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[13] Holger Stark,et al. Arrangement of RNA and proteins in the spliceosomal U1 small nuclear ribonucleoprotein particle , 2001, Nature.
[14] Bertrand Séraphin,et al. A Sm‐like protein complex that participates in mRNA degradation , 2000, The EMBO journal.
[15] P. Andrew Karplus,et al. Improved R-factors for diffraction data analysis in macromolecular crystallography , 1997, Nature Structural Biology.
[16] S. Kostka,et al. Sm protein–Sm site RNA interactions within the inner ring of the spliceosomal snRNP core structure , 2001, The EMBO journal.
[17] Claude Sauter,et al. Crystal Structures of the Pyrococcus abyssi Sm Core and Its Complex with RNA , 2003, The Journal of Biological Chemistry.
[18] Jean D. Beggs,et al. Yeast Sm-like proteins function in mRNA decapping and decay , 2000, Nature.
[19] Susan E. Brown,et al. Interaction of the Escherichia coli replication terminator protein (Tus) with DNA: a model derived from DNA-binding studies of mutant proteins by surface plasmon resonance. , 2000, Biochemistry.
[20] B. Kastner,et al. Electron microscopy of small nuclear ribonucleoprotein (snRNP) particles U2 and U5: evidence for a common structure-determining principle in the major U snRNP family. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[21] T. Blumenthal. Trans-splicing and polycistronic transcription in Caenorhabditis elegans. , 1995, Trends in genetics : TIG.
[22] P. Højrup,et al. Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction. , 2002, Molecular cell.
[23] B. Séraphin,et al. Stoichiometry of the Sm proteins in yeast spliceosomal snRNPs supports the heptamer ring model of the core domain. , 2001, Journal of molecular biology.
[24] E J Dodson,et al. Collaborative Computational Project, number 4: providing programs for protein crystallography. , 1997, Methods in enzymology.
[25] B. Séraphin,et al. The spliceosomal snRNP core complex of Trypanosoma brucei: cloning and functional analysis reveals seven Sm protein constituents. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[26] G. Cathala,et al. Use of n-butanol for efficient recovery of minute amounts of small RNA fragments and branched nucleotides from dilute solutions , 1990, Nucleic Acids Res..
[27] T. Laurent,et al. A theory of gel filtration and its exeperimental verification , 1964 .
[28] R J Read,et al. Crystallography & NMR system: A new software suite for macromolecular structure determination. , 1998, Acta crystallographica. Section D, Biological crystallography.
[29] H. Schägger,et al. Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. , 1987, Analytical biochemistry.
[30] J D Beggs,et al. Characterization of Sm‐like proteins in yeast and their association with U6 snRNA , 1999, The EMBO journal.
[31] M. Wilm,et al. A doughnut‐shaped heteromer of human Sm‐like proteins binds to the 3′‐end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitro , 1999, The EMBO journal.
[32] J. Thornton,et al. PROCHECK: a program to check the stereochemical quality of protein structures , 1993 .
[33] B. Kastner,et al. Spliceosomal U snRNP Core Assembly: Sm Proteins Assemble onto an Sm Site RNA Nonanucleotide in a Specific and Thermodynamically Stable Manner , 1999, Molecular and Cellular Biology.
[34] B. Séraphin,et al. RNA binding in an Sm core domain: X‐ray structure and functional analysis of an archaeal Sm protein complex , 2001, EMBO Journal.
[35] P. Curmi,et al. Crystal structure of a heptameric Sm-like protein complex from archaea: implications for the structure and evolution of snRNPs. , 2001, Journal of molecular biology.
[36] G. Meister,et al. Methylation of Sm proteins by a complex containing PRMT5 and the putative U snRNP assembly factor pICln , 2001, Current Biology.
[37] W. Zhang,et al. Multiple protein: protein interactions between the snRNP common core proteins. , 1997, Experimental cell research.
[38] Eugene V Koonin,et al. Comparative genomics and evolution of proteins involved in RNA metabolism. , 2002, Nucleic acids research.
[39] J. Zou,et al. Improved methods for building protein models in electron density maps and the location of errors in these models. , 1991, Acta crystallographica. Section A, Foundations of crystallography.
[40] H. Stark,et al. The Sm domain is an ancient RNA-binding motif with oligo(U) specificity , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[41] G N Murshudov,et al. Use of TLS parameters to model anisotropic displacements in macromolecular refinement. , 2001, Acta crystallographica. Section D, Biological crystallography.
[42] B. Kastner,et al. Electron microscopy of assembly intermediates of the snRNP core: morphological similarities between the RNA-free (E.F.G) protein heteromer and the intact snRNP core. , 1997, Journal of molecular biology.
[43] B. Matthews. Solvent content of protein crystals. , 1968, Journal of molecular biology.
[44] G. Stier,et al. SMN Tudor domain structure and its interaction with the Sm proteins , 2001, Nature Structural Biology.
[45] K. Nagai,et al. Crystal Structures of Two Sm Protein Complexes and Their Implications for the Assembly of the Spliceosomal snRNPs , 1999, Cell.