A DNA-Origami chip platform for label-free SNP genotyping using toehold-mediated strand displacement.

[Zhang, Z; Feng, GY; He, L; Li, C; Fan, CH] Shanghai Jiao Tong Univ, Key Lab Genet Dev & Neuropsychiat Disorders, Minist Educ, BioX Ctr, Shanghai 200030, Peoples R China; [Zeng, DD; Hu, J; Fan, CH] Chinese Acad Sci, Phys Biol Lab, Shanghai Inst Appl Phys, Shanghai 201800, Peoples R China; [Zeng, DD; Ma, HW] Chinese Acad Sci, Suzhou Inst Nanotech & Nanobion, Suzhou 215125, Peoples R China; [Zhang, Z] Aarhus Univ, Ctr DNA Nanotechnol CDNA, DK-8000 Aarhus C, Denmark

[1]  A. Turberfield,et al.  A DNA-fuelled molecular machine made of DNA , 2022 .

[2]  Chunhai Fan,et al.  A gold nanoparticle-based chronocoulometric DNA sensor for amplified detection of DNA , 2007, Nature Protocols.

[3]  Harry M. T. Choi,et al.  Programming biomolecular self-assembly pathways , 2008, Nature.

[4]  Russell P. Goodman,et al.  Rapid Chiral Assembly of Rigid DNA Building Blocks for Molecular Nanofabrication , 2005, Science.

[5]  H. Soh,et al.  An electrochemical sensor for single nucleotide polymorphism detection in serum based on a triple-stem DNA probe. , 2009, Journal of the American Chemical Society.

[6]  Guodong Liu,et al.  Electrochemical quantification of single-nucleotide polymorphisms using nanoparticle probes. , 2007, Journal of the American Chemical Society.

[7]  Simon C. Potter,et al.  Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls , 2007, Nature.

[8]  Bernard Yurke,et al.  Using DNA to Power Nanostructures , 2003, Genetic Programming and Evolvable Machines.

[9]  N. Seeman.  DNA in a material world , 2003, Nature.

[10]  Zhaohui S. Qin,et al.  A second generation human haplotype map of over 3.1 million SNPs , 2007, Nature.

[11]  Lulu Qian,et al.  Asymmetric DNA Origami for Spatially Addressable and Index‐Free Solution‐Phase DNA Chips , 2010, Advanced materials.

[12]  Darko Stefanovic,et al.  A deoxyribozyme-based molecular automaton , 2003, Nature Biotechnology.

[13]  Andrew D Ellington,et al.  Playing to win at DNA computation , 2003, Nature Biotechnology.

[14]  Hao Yan,et al.  Self-Assembled Water-Soluble Nucleic Acid Probe Tiles for Label-Free RNA Hybridization Assays , 2008, Science.

[15]  Henrik H. J. Persson,et al.  DNA nanomechanics allows direct digital detection of complementary DNA and microRNA targets , 2009, Nature.

[16]  G. Seelig,et al.  Enzyme-Free Nucleic Acid Logic Circuits , 2022 .

[17]  Chunhai Fan,et al.  Sequence-specific detection of femtomolar DNA via a chronocoulometric DNA sensor (CDS): effects of nanoparticle-mediated amplification and nanoscale control of DNA assembly at electrodes. , 2006, Journal of the American Chemical Society.

[18]  D. Y. Zhang,et al.  Engineering Entropy-Driven Reactions and Networks Catalyzed by DNA , 2007, Science.

[19]  J. Gooding,et al.  DNA recognition interfaces: the influence of interfacial design on the efficiency and kinetics of hybridization. , 2005, Langmuir : the ACS journal of surfaces and colloids.

[20]  C. Mao,et al.  Hierarchical self-assembly of DNA into symmetric supramolecular polyhedra , 2008, Nature.

[21]  Zhengping Li,et al.  A sensitive and homogeneous SNP detection using cationic conjugated polymers. , 2007, Journal of the American Chemical Society.

[22]  J. Kjems,et al.  Self-assembly of a nanoscale DNA box with a controllable lid , 2009, Nature.

[23]  K. Mossman.  The Wellcome Trust Case Control Consortium, U.K. , 2008 .

[24]  Wei Xu,et al.  Multiplex single-nucleotide polymorphism typing by nanoparticle-coupled DNA-templated reactions. , 2009, Journal of the American Chemical Society.

[25]  Shawn M. Douglas,et al.  Self-assembly of DNA into nanoscale three-dimensional shapes , 2009, Nature.

[26]  A. Misra,et al.  SNP genotyping: technologies and biomedical applications. , 2007, Annual review of biomedical engineering.

[27]  Colin D. Medley,et al.  Molecular engineering of DNA: molecular beacons. , 2009, Angewandte Chemie.

[28]  Guodong Liu,et al.  Electrochemical coding technology for simultaneous detection of multiple DNA targets. , 2003, Journal of the American Chemical Society.

[29]  E. Kool,et al.  Nonenzymatic autoligation in direct three-color detection of RNA and DNA point mutations , 2001, Nature Biotechnology.

[30]  D. Y. Zhang,et al.  Control of DNA strand displacement kinetics using toehold exchange. , 2009, Journal of the American Chemical Society.

[31]  Itamar Willner,et al.  Detection of single-base DNA mutations by enzyme-amplified electronic transduction , 2001, Nature Biotechnology.

[32]  P. Rothemund.  Folding DNA to create nanoscale shapes and patterns , 2006, Nature.

[33]  Sung Yong Park,et al.  DNA-programmable nanoparticle crystallization , 2008, Nature.