The Polyadenylation of RNA in Plants

Poly(A) tracts are a nearly ubiquitous feature of mRNAs in eukaryotes. The poly(A) tail is an important determinant of the function of a eukaryotic mRNA, because it is intimately involved in processes that determine the translatability (Sachs and Wahle, 1993) and lifetime (Jacobson and Peltz, 1996) of mRNAs. From this perspective, the addition of the poly(A) tail to an mRNA is an important, even necessary, step in the expression of eukaryotic genes. However, although the functions of a poly(A) tail are largely manifest in the cytoplasm, the process of polyadenylation itself is an important component of mRNA metabolism. A growing body of evidence indicates that mRNA polyadenylation may be physically linked to the processes of intron remova1 (e.g. Niwa et al., 1990) and transcription termination (McCracken et al., 1997), and other studies imply an interplay between polyadenylation and transport of mRNA (Huang and Carmichael, 1996). Thus, it may be more appropriate to consider mRNA 3'-end formation as part of a larger series of events that begins with the initiation of transcription by RNA polymerase I1 and ends with the delivery of a mature, polyadenylated mRNA to the cytoplasm. In this context, the individual components that mediate mRNA polyadenylation may be expected to have an impact on other nuclear processes (splicing, trankription termination, and transport) as well. Several recent reviews may be consulted for a detailed picture of the process by which mRNAs are polyadenylated in animals and yeast (Wahle, 1995; Proudfoot, 1996; Wahle and Keller, 1996). Briefly, poly(A) tails are nontemplated and are thus added to nuclear mRNA precursors in a posttranscriptional process. Moreover, polyadenylation in the nucleus is usually viewed as an RNA processing event; in other words, the 3' end of the mRNA to which poly(A) i s added is generated, not by termination of transcription by RNA polymerase 11, but rather by processing of a larger RNA that is generated by transcription beyond the poly(A) site. In mammals and yeast a finite series of factors (5-6) cooperate to recognize, process, and polyadenylate precursor mRNAs in the nucleus. Several of the

[1]  S. Rose,et al.  In vitro polyadenylation is stimulated by the presence of an upstream intron. , 1990, Genes & development.

[2]  F. Sherman,et al.  Signals that produce 3' termini in CYC1 mRNA of the yeast Saccharomyces cerevisiae , 1993, Molecular and cellular biology.

[3]  E. Wahle,et al.  3'-end cleavage and polyadenylation of mRNA precursors. , 1995, Biochimica et biophysica acta.

[4]  S. Leff,et al.  Complex transcriptional units: diversity in gene expression by alternative RNA processing. , 1986, Annual review of biochemistry.

[5]  S. R. Kushner,et al.  Development of an in vitro mRNA decay system for Escherichia coli: poly(A) polymerase I is necessary to trigger degradation. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[6]  E. Wahle,et al.  The biochemistry of polyadenylation. , 1996, Trends in biochemical sciences.

[7]  G. Burkard,et al.  Poly(A) polymerase and poly(g) polymerase in wheat chloroplasts. , 1974, Proceedings of the National Academy of Sciences of the United States of America.

[8]  V. Walbot,et al.  Intron creation and polyadenylation in maize are directed by AU-rich RNA. , 1994, Genes & development.

[9]  N. Proudfoot,et al.  Ending the Message Is Not So Simple , 1996, Cell.

[10]  S. Peltz,et al.  Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells. , 1996, Annual review of biochemistry.

[11]  J. Messing,et al.  The formation of mRNA 3'-ends in plants. , 1995, The Plant journal : for cell and molecular biology.

[12]  N. Chua,et al.  Monocot and dicot pre‐mRNAs are processed with different efficiencies in transgenic tobacco , 1986, The EMBO journal.

[13]  M. Iwabuchi,et al.  The conserved 3'-flanking sequence, AATGGAAATG, of the wheat histone H3 gene is necessary for the accurate 3'-end formation of mRNA. , 1994, Nucleic acids research.

[14]  N. Sarkar Polyadenylation of mRNA in bacteria. , 1996, Microbiology.

[15]  C. Birse,et al.  RNA 3′ end signals of the S.pombe ura4 gene comprise a site determining and efficiency element. , 1994, The EMBO journal.

[16]  G. Carmichael,et al.  Role of polyadenylation in nucleocytoplasmic transport of mRNA , 1996, Molecular and cellular biology.

[17]  D. Saluja,et al.  Purification and characterization of poly(A) polymerase from germinated wheat embryos: enzyme glycosylation , 1993 .

[18]  S. Mayfield,et al.  Regulation of Chloroplast Gene Expression , 1995 .

[19]  N. Verma,et al.  Evidence to show the phosphoprotein nature of poly(A) polymerase in germinated wheat embryos: enzyme regulation through phosphorylation , 1994 .

[20]  M. Wickens,et al.  Nuclear polyadenylation factors recognize cytoplasmic polyadenylation elements. , 1994, Genes & development.

[21]  W. Gruissem,et al.  Polyadenylation accelerates degradation of chloroplast mRNA. , 1996, The EMBO journal.

[22]  J. Messing,et al.  3'-end processing of the maize 27 kDa zein mRNA. , 1993, The Plant journal : for cell and molecular biology.

[23]  P. Klaff,et al.  Addition of destabilizing poly (A)-rich sequences to endonuclease cleavage sites during the degradation of chloroplast mRNA. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[24]  M. Macdonald,et al.  Several distinct types of sequence elements are required for efficient mRNA 3' end formation in a pea rbcS gene , 1992, Molecular and cellular biology.

[25]  J. Messing,et al.  Sequence and spatial requirements for the tissue- and species-independent 3'-end processing mechanism of plant mRNA , 1994, Molecular and cellular biology.

[26]  C. Dean,et al.  mRNA transcripts of several plant genes are polyadenylated at multiple sites in vivo. , 1986, Nucleic acids research.

[27]  A. Sachs,et al.  Poly(A) tail metabolism and function in eucaryotes. , 1993, The Journal of biological chemistry.

[28]  M. Macdonald,et al.  Characterization of the polyadenylation signal from the T-DNA-encoded octopine synthase gene. , 1991, Nucleic acids research.

[29]  M. Wickens,et al.  The C-terminal domain of RNA polymerase II couples mRNA processing to transcription , 1997, Nature.