Antisense technologies. Improvement through novel chemical modifications.
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[1] C. Bennett,et al. Antisense oligonucleotides as a tool for gene functionalization and target validation. , 1999, Biochimica et biophysica acta.
[2] D. Corey,et al. Application of PNA and LNA oligomers to chemotherapy. , 2001, Current opinion in investigational drugs.
[3] M. Nerenberg,et al. Effect of phosphorothioate modification of oligodeoxynucleotides on specific protein binding. , 1994, The Journal of biological chemistry.
[4] Thomas Tuschl,et al. Expanding small RNA interference , 2002, Nature Biotechnology.
[5] Michael T. McManus,et al. Gene silencing in mammals by small interfering RNAs , 2002, Nature Reviews Genetics.
[6] Y. Hari,et al. Stability and Structural Features of the Duplexes Containing Nucleoside Analogues with a Fixed N‐Type Conformation, 2′‐O,4′‐C‐Methyleneribonucleosides. , 1998 .
[7] A. Gewirtz,et al. Nucleic-acid therapeutics: basic principles and recent applications , 2002, Nature Reviews Drug Discovery.
[8] B. Sullenger,et al. Emerging clinical applications of RNA , 2002, Nature.
[9] C. Leumann,et al. Tricyclo-DNA: A phosphodiester-backbone based DNA analog exhibiting strong complementary base-pairing properties , 1997 .
[10] P. Herdewijn,et al. Cyclohexene Nucleic Acids (CeNA): Serum Stable Oligonucleotides that Activate RNase H and Increase Duplex Stability with Complementary RNA , 2000 .
[11] Yedy Israel,et al. Tetranucleotide GGGA Motif in Primary RNA Transcripts , 1998, The Journal of Biological Chemistry.
[12] E. Wickstrom,et al. Oligodeoxynucleoside phosphorothioate stability in subcellular extracts, culture media, sera and cerebrospinal fluid. , 1990, Journal of biochemical and biophysical methods.
[13] O. Potapova,et al. Antisense methods for discrimination of phenotypic properties of closely related gene products: Jun kinase family. , 2000, Methods in enzymology.
[14] P. Herdewijn. Heterocyclic modifications of oligonucleotides and antisense technology. , 2000, Antisense & nucleic acid drug development.
[15] J. Wengel,et al. Novel convenient syntheses of LNA [2.2.1]bicyclo nucleosides , 1998 .
[16] M. Reitz,et al. Phosphorothioate analogs of oligodeoxynucleotides: inhibitors of replication and cytopathic effects of human immunodeficiency virus. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[17] M. Hughes,et al. The cellular delivery of antisense oligonucleotides and ribozymes. , 2001, Drug discovery today.
[18] V. Erdmann,et al. Comparative Study of DNA Enzymes and Ribozymes against the Same Full-length Messenger RNA of the Vanilloid Receptor Subtype I* , 2002, The Journal of Biological Chemistry.
[19] S. Crooke,et al. Properties of Cloned and Expressed Human RNase H1* , 1999, The Journal of Biological Chemistry.
[20] G. F. Joyce,et al. A general purpose RNA-cleaving DNA enzyme. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[21] S. Ekker,et al. Effective targeted gene ‘knockdown’ in zebrafish , 2000, Nature Genetics.
[22] D. E. Ruffner,et al. Construction of a directed hammerhead ribozyme library: towards the identification of optimal target sites for antisense-mediated gene inhibition. , 1998, Nucleic acids research.
[23] S. Gryaznov,et al. Oligodeoxyribonucleotide N3'.fwdarw.P5' Phosphoramidates: synthesis and Hybridization Properties , 1994 .
[24] Poul Nielsen,et al. LNA (Locked Nucleic Acids): Synthesis of the adenine, cytosine, guanine, 5-methylcytosine, thymine and uracil bicyclonucleoside monomers, oligomerisation, and unprecedented nucleic acid recognition , 1998 .
[25] V. Erdmann,et al. Sequence Requirements in the Catalytic Core of the “10-23” DNA Enzyme* , 2002, The Journal of Biological Chemistry.
[26] C. Wilds,et al. Potent gene-specific inhibitory properties of mixed-backbone antisense oligonucleotides comprised of 2'-deoxy-2'-fluoro-D-arabinose and 2'-deoxyribose nucleotides. , 2002, Biochemistry.
[27] R Kole,et al. Restoration of hemoglobin A synthesis in erythroid cells from peripheral blood of thalassemic patients. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[28] Federica Gemignani,et al. Systemically delivered antisense oligomers upregulate gene expression in mouse tissues , 2002, Nature Biotechnology.
[29] A. Levin. A review of the issues in the pharmacokinetics and toxicology of phosphorothioate antisense oligonucleotides. , 1999, Biochimica et biophysica acta.
[30] A. Beaudry,et al. Selection, design, and characterization of a new potentially therapeutic ribozyme. , 2002, RNA.
[31] T. Lockett,et al. Selected classes of minimised hammerhead ribozyme have very high cleavage rates at low Mg2+ concentration. , 1999, Nucleic acids research.
[32] Ali Ehsani,et al. Expression of small interfering RNAs targeted against HIV-1 rev transcripts in human cells , 2002, Nature Biotechnology.
[33] W. Forrester,et al. A DNA vector-based RNAi technology to suppress gene expression in mammalian cells , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[34] S. Agrawal,et al. Antitumor activity and pharmacokinetics of a mixed-backbone antisense oligonucleotide targeted to the RIalpha subunit of protein kinase A after oral administration. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[35] Frank Baas,et al. UvA-DARE ( Digital Academic Repository ) In vivo tumor growth inhibition and biodistribution studies of locked nucleic acid ( LNA ) antisense oligonucleotides , 2017 .
[36] P. Herdewijn,et al. RNase H mediated cleavage of RNA by cyclohexene nucleic acid (CeNA). , 2001, Nucleic acids research.
[37] M. Strauss,et al. Selection of efficient cleavage sites in target RNAs by using a ribozyme expression library , 1995, Molecular and cellular biology.
[38] L. Khachigian,et al. New DNA enzyme targeting Egr-1 mRNA inhibits vascular smooth muscle proliferation and regrowth after injury , 1999, Nature Medicine.
[39] G. Devi. Prostate cancer: status of current treatments and emerging antisense-based therapies. , 2002, Current opinion in molecular therapeutics.
[40] Stacy L DeRuiter,et al. RNA interference by expression of short-interfering RNAs and hairpin RNAs in mammalian cells , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[41] T. Cech,et al. Self-splicing RNA: Autoexcision and autocyclization of the ribosomal RNA intervening sequence of tetrahymena , 1982, Cell.
[42] Douglas S. Conklin,et al. Gene expression: RNA interference in adult mice , 2002, Nature.
[43] C. Marwick,et al. First "antisense" drug will treat CMV retinitis. , 1998, JAMA.
[44] J. Chattopadhyaya,et al. A critical survey of the structure-function of the antisense oligo/RNA heteroduplex as substrate for RNase H. , 2001, Journal of biochemical and biophysical methods.
[45] N. Vaish,et al. Sequence specificity of the hammerhead ribozyme revisited; the NHH rule. , 1998, Nucleic acids research.
[46] J. Wengel,et al. Inhibition of HIV-1 Tat-dependent trans activation by steric block chimeric 2'-O-methyl/LNA oligoribonucleotides. , 2001, Biochemistry.
[47] R. Griffey,et al. Kinetic characteristics of Escherichia coli RNase H1: cleavage of various antisense oligonucleotide-RNA duplexes. , 1995, The Biochemical journal.
[48] J. Rossi,et al. Rapid determination and quantitation of the accessibility to native RNAs by antisense oligodeoxynucleotides in murine cell extracts. , 1998, Nucleic acids research.
[49] C. Stein. The experimental use of antisense oligonucleotides: a guide for the perplexed. , 2001, The Journal of clinical investigation.
[50] T. Tuschl,et al. Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells , 2001, Nature.
[51] M. Egholm,et al. Sequence-selective recognition of DNA by strand displacement with a thymine-substituted polyamide. , 1991, Science.
[52] B. Wiesner,et al. Cellular uptake of antisense oligonucleotides after complexing or conjugation with cell-penetrating model peptides. , 2002, European journal of biochemistry.
[53] L. Khachigian,et al. c-Jun Regulates Vascular Smooth Muscle Cell Growth and Neointima Formation after Arterial Injury , 2002, The Journal of Biological Chemistry.
[54] M. Amarzguioui,et al. Tolerance for mutations and chemical modifications in a siRNA. , 2003, Nucleic acids research.
[55] D. Engelke,et al. Effective expression of small interfering RNA in human cells , 2002, Nature Biotechnology.
[56] Haibin Xia,et al. siRNA-mediated gene silencing in vitro and in vivo , 2002, Nature Biotechnology.
[57] Phillip D. Zamore,et al. RNA interference: listening to the sound of silence , 2001, Nature Structural Biology.
[58] L. Wright,et al. Current Status of Ribozymes as Gene Therapy Agents for Cancer , 2001, Cancer investigation.
[59] A. Karpeisky,et al. Chemical Modification of Hammerhead Ribozymes , 1995, The Journal of Biological Chemistry.
[60] Randall R. Sakai,et al. Mapping of RNA accessible sites for antisense experiments with oligonucleotide libraries , 1998, Nature Biotechnology.
[61] T. Merigan,et al. Interferon Induction Increased through Chemical Modification of a Synthetic Polyribonucleotide , 1969, Science.
[62] F Eckstein,et al. In Vitro Selection of Hammerhead Ribozyme Sequence Variants , 2001, Chembiochem : a European journal of chemical biology.
[63] Judy Lieberman,et al. RNA interference targeting Fas protects mice from fulminant hepatitis , 2003, Nature Medicine.
[64] S. Crooke,et al. Progress in antisense technology: the end of the beginning. , 2000, Methods in enzymology.
[65] H. James,et al. The therapeutic potential of ribozymes. , 1998, Blood.
[66] J. Wengel,et al. Structural studies of LNA:RNA duplexes by NMR: conformations and implications for RNase H activity. , 2000, Chemistry.
[67] T. Jarvis,et al. Nuclease-resistant ribozymes decrease stromelysin mRNA levels in rabbit synovium following exogenous delivery to the knee joint. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[68] I. Brukner,et al. HYBRIDS OF RNA AND ARABINONUCLEIC ACIDS (ANA AND 2'F-ANA) ARE SUBSTRATES OF RIBONUCLEASE H , 1998 .
[69] K. Taira,et al. U6 promoter–driven siRNAs with four uridine 3′ overhangs efficiently suppress targeted gene expression in mammalian cells , 2002, Nature Biotechnology.
[70] O. Uhlenbeck. A small catalytic oligoribonucleotide , 1987, Nature.
[71] E. Southern,et al. Selecting optimal antisense reagents. , 2000, Advanced drug delivery reviews.
[72] Hui Wang,et al. Antitumor activity and pharmacokinetics of a mixed-backbone antisense oligonucleotide targeted to the RIalpha subunit of protein kinase A after oral administration. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[73] S. Agrawal,et al. Repair of thalassemic human b-globin mRNA in mammalian cells by antisense oligonucleotides ( RNA splicing y gene therapy ) , 1996 .
[74] J. Heasman. Morpholino oligos: making sense of antisense? , 2002, Developmental biology.
[75] Christian J. Leumann,et al. Antisense properties of tricyclo-DNA , 2002, Nucleic Acids Res..
[76] Jennifer A. Doudna,et al. The chemical repertoire of natural ribozymes , 2002, Nature.
[77] N. Usman,et al. Nuclease-resistant synthetic ribozymes: developing a new class of therapeutics. , 2000, The Journal of clinical investigation.
[78] A. Dove. Antisense and sensibility , 2002, Nature Biotechnology.
[79] F. Eckstein. Phosphorothioate oligodeoxynucleotides: what is their origin and what is unique about them? , 2000, Antisense & nucleic acid drug development.
[80] D. Scherman,et al. Phosphoramidate oligonucleotides as potent antisense molecules in cells and in vivo , 2001, Nature Biotechnology.
[81] Dl Becker,et al. Pluoronic gel as a means of antisense delivery , 1999 .
[82] J. F. Atkins,et al. A rapid in vitro method for obtaining RNA accessibility patterns for complementary DNA probes: correlation with an intracellular pattern and known RNA structures. , 1997, Nucleic acids research.
[83] P. Nielsen,et al. Antisense properties of peptide nucleic acid. , 1999, Methods in enzymology.
[84] Lois E. H. Smith,et al. Oligonucleotide-based inhibition of embryonic gene expression , 1999, Nature Biotechnology.
[85] D. Fischer,et al. Delivery of unmodified bioactive ribozymes by an RNA-stabilizing polyethylenimine (LMW-PEI) efficiently down-regulates gene expression , 2002, Gene Therapy.
[86] G. Trainor,et al. Potent antisense oligonucleotides to the human multidrug resistance-1 mRNA are rationally selected by mapping RNA-accessible sites with oligonucleotide libraries. , 1996, Nucleic acids research.
[87] J. Wengel,et al. Locked nucleic acids: a promising molecular family for gene-function analysis and antisense drug development. , 2001, Current opinion in molecular therapeutics.
[88] M. Cairns,et al. Suppression of Smooth Muscle Cell Proliferation by a c-myc RNA-cleaving Deoxyribozyme* , 1999, The Journal of Biological Chemistry.
[89] N. Goldstein,et al. Cell-surface perturbations of the epidermal growth factor and vascular endothelial growth factor receptors by phosphorothioate oligodeoxynucleotides. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[90] David R Corey,et al. Implications of high-affinity hybridization by locked nucleic acid oligomers for inhibition of human telomerase. , 2002, Biochemistry.
[91] P. Nowell,et al. Oligodeoxynucleotide-mediated inhibition of c-myb gene expression in autografted bone marrow: a pilot study. , 2002, Blood.
[92] Elizabeth M. Greetham. How do you measure "success" in a biotechnology company? , 1998, Nature Biotechnology.
[93] N. Pace,et al. The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme , 1983, Cell.
[94] C. Stein,et al. Phosphorothioate Oligodeoxynucleotides Bind to Basic Fibroblast Growth Factor, Inhibit Its Binding to Cell Surface Receptors, and Remove It from Low Affinity Binding Sites on Extracellular Matrix (*) , 1995, The Journal of Biological Chemistry.
[95] I Lebedeva,et al. Antisense oligonucleotides: promise and reality. , 2001, Annual review of pharmacology and toxicology.
[96] D. Lilley,et al. Catalytic RNA , 1997, Nucleic Acids and Molecular Biology.
[97] W. Gerlach,et al. Simple RNA enzymes with new and highly specific endoribonuclease activities , 1988, Nature.
[98] E. Southern,et al. Selecting effective antisense reagents on combinatorial oligonucleotide arrays , 1997, Nature Biotechnology.
[99] E. Luzi,et al. HIV-1 LTR as a target for synthetic ribozyme-mediated inhibition of gene expression: site selection and inhibition in cell culture. , 2000, Nucleic acids research.
[100] V. Erdmann,et al. Design of antisense oligonucleotides stabilized by locked nucleic acids. , 2002, Nucleic acids research.
[101] David R Corey,et al. Novel antisense and peptide nucleic acid strategies for controlling gene expression. , 2002, Biochemistry.
[102] Yukui Li,et al. Discovery and development of respirable antisense therapeutics for asthma. , 2002, Antisense & nucleic acid drug development.
[103] N. Chaudhary,et al. Inhibition of hepatitis C virus (HCV)‐RNA–dependent translation and replication of a chimeric HCV poliovirus using synthetic stabilized ribozymes , 2000, Hepatology.
[104] P. D. Cook,et al. Evaluation of 2'-modified oligonucleotides containing 2'-deoxy gaps as antisense inhibitors of gene expression. , 1993, The Journal of biological chemistry.
[105] R. Bernards,et al. Stable suppression of tumorigenicity by virus-mediated RNA interference. , 2002, Cancer cell.
[106] M. Cairns,et al. Catalytic nucleic acids: from lab to applications. , 2000, Pharmacological reviews.
[107] D. Corey,et al. Antisense inhibition of gene expression in cells by oligonucleotides incorporating locked nucleic acids: effect of mRNA target sequence and chimera design. , 2002, Nucleic acids research.
[108] T. Jarvis,et al. Optimizing the Cell Efficacy of Synthetic Ribozymes , 1996, The Journal of Biological Chemistry.
[109] J. Rossi,et al. Intracellular applications of ribozymes. , 2001, Methods in enzymology.
[110] W. Fu,et al. Inhibition of neuropathic pain by a potent disintegrin—triflavin , 2004, Neuroscience Letters.
[111] W. Pardridge,et al. Antisense imaging of gene expression in the brain in vivo. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[112] M. Gold,et al. Inhibition of neuropathic pain by decreased expression of the tetrodotoxin-resistant sodium channel, NaV1.8 , 2002, Pain.
[113] E. Niiler. Analysts: Isis–Lilly deal validates antisense , 2001, Nature Biotechnology.
[114] B. Calabretta,et al. Antileukemia effect of c-myc N3'-->P5' phosphoramidate antisense oligonucleotides in vivo. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[115] D. Corey,et al. Locked nucleic acid (LNA): fine-tuning the recognition of DNA and RNA. , 2001, Chemistry & biology.
[116] A. Riggs,et al. Oligonucleotide scanning of native mRNAs in extracts predicts intracellular ribozyme efficiency: ribozyme-mediated reduction of the murine DNA methyltransferase. , 2000, Molecular therapy : the journal of the American Society of Gene Therapy.
[117] D. Renneberg,et al. Watson-Crick base-pairing properties of tricyclo-DNA. , 2002, Journal of the American Chemical Society.
[118] T. Cech,et al. In vitro splicing of the ribosomal RNA precursor of tetrahymena: Involvement of a guanosine nucleotide in the excision of the intervening sequence , 1981, Cell.
[119] R. Bernards,et al. A System for Stable Expression of Short Interfering RNAs in Mammalian Cells , 2002, Science.
[120] E. Lesnik,et al. 2′-O-(2-Methoxy)ethyl-modified Anti-intercellular Adhesion Molecule 1 (ICAM-1) Oligonucleotides Selectively Increase the ICAM-1 mRNA Level and Inhibit Formation of the ICAM-1 Translation Initiation Complex in Human Umbilical Vein Endothelial Cells* , 1997, The Journal of Biological Chemistry.
[121] David L. Lewis,et al. Efficient delivery of siRNA for inhibition of gene expression in postnatal mice , 2002, Nature Genetics.
[122] K. Jen,et al. Suppression of Gene Expression by Targeted Disruption of Messenger RNA: Available Options and Current Strategies , 2000, Stem cells.
[123] A. Dove. Isis and antisense face crucial test without Novartis , 2000, Nature Biotechnology.
[124] T. Hökfelt,et al. Potent and nontoxic antisense oligonucleotides containing locked nucleic acids. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[125] Gunther Hartmann,et al. Antisense therapy in oncology: new hope for an old idea? , 2001, The Lancet.
[126] A. Fire,et al. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans , 1998, Nature.
[127] J. Shay,et al. Oligonucleotide N3′→P5′ phosphoramidates as efficient telomerase inhibitors , 2002, Oncogene.
[128] De-Pei Liu,et al. Optimizing the delivery systems of chimeric RNA.DNA oligonucleotides. , 2002, European journal of biochemistry.
[129] M. Stephenson,et al. Inhibition of Rous sarcoma virus replication and cell transformation by a specific oligodeoxynucleotide. , 1978, Proceedings of the National Academy of Sciences of the United States of America.
[130] G. F. Joyce. RNA cleavage by the 10-23 DNA enzyme. , 2001, Methods in enzymology.
[131] N. Vaish,et al. In vitro selection of a purine nucleotide-specific hammerheadlike ribozyme. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[132] M. Phillips,et al. Basic principles of using antisense oligonucleotides in vivo. , 2000, Methods in enzymology.