Narrow Escape, Part I

A Brownian particle with diffusion coefficient D is confined to a bounded domain Ω by a reflecting boundary, except for a small absorbing window $$\partial\Omega_a$$. The mean time to absorption diverges as the window shrinks, thus rendering the calculation of the mean escape time a singular perturbation problem. In the three-dimensional case, we construct an asymptotic approximation when the window is an ellipse, assuming the large semi axis a is much smaller than $$|\Omega|^{1/3}$$ ($$|\Omega|$$ is the volume), and show that the mean escape time is $$E\tau\sim{\frac{|\Omega|}{2\pi Da}} K(e)$$, where e is the eccentricity and $$K(\cdot)$$ is the complete elliptic integral of the first kind. In the special case of a circular hole the result reduces to Lord Rayleigh's formula $$E\tau\sim{\frac{|\Omega|}{4aD}}$$, which was derived by heuristic considerations. For the special case of a spherical domain, we obtain the asymptotic expansion $$E\tau={\frac{|\Omega|}{4aD}} [1+\frac{a}{R} \log \frac{R}{a} + O(\frac{a}{R})]$$. This result is important in understanding the flow of ions in and out of narrow valves that control a wide range of biological and technological function. If Ω is a two-dimensional bounded Riemannian manifold with metric g and $$\varepsilon=|\partial\Omega_a|_g/|\Omega|_g\ll1$$, we show that $$E\tau ={\frac{|\Omega|_g}{D\pi}}[\log{\frac{1}{\varepsilon}}+O(1)]$$. This result is applicable to diffusion in membrane surfaces.

[1]  L. W.,et al.  The Theory of Sound , 1898, Nature.

[2]  Edmund Taylor Whittaker,et al.  A Course of Modern Analysis , 2021 .

[3]  R. P. Soni,et al.  Formulas and Theorems for the Special Functions of Mathematical Physics , 1967 .

[4]  Otto R. Spies,et al.  Tables of integral transforms, volume 2: edited by A. Erdelyi. 451 pages, 16 × 24 cm. New York, McGraw-Hill Book Co., Inc., 1954. Price, $8.00. , 1955 .

[5]  A. Erdélyi,et al.  Tables of integral transforms , 1955 .

[6]  W. D. Collins Note on an electrified circular disk situated inside an earthed coaxial infinite hollow cylinder , 1961, Mathematical Proceedings of the Cambridge Philosophical Society.

[7]  W. D. Collins On some dual series equations and their application to electrostatic problems for spheroidal caps , 1961, Mathematical Proceedings of the Cambridge Philosophical Society.

[8]  L. S. Pontryagin,et al.  Mathematical Theory of Optimal Processes , 1962 .

[9]  E. Blum,et al.  The Mathematical Theory of Optimal Processes. , 1963 .

[10]  Leon M. Hall,et al.  Special Functions , 1998 .

[11]  R. B. Kelman STEADY-STATE DIFFUSION THROUGH A FINITE PORE INTO AN INFINITE RESERVOIR: AN EXACT SOLUTION. , 1965, The Bulletin of mathematical biophysics.

[12]  J. Gillis,et al.  Mixed boundary value problems in potential theory , 1966 .

[13]  Eugene P. Wigner,et al.  Formulas and Theorems for the Special Functions of Mathematical Physics , 1966 .

[14]  R. Knops,et al.  Three-Dimensional Problems of the Theory of Elasticity , 1967, The Mathematical Gazette.

[15]  A. I. Lur’e Three - dimensional problems of the theory of elasticity , 1968 .

[16]  R. Keynes The ionic channels in excitable membranes. , 1975, Ciba Foundation symposium.

[17]  B. Matkowsky,et al.  The Exit Problem for Randomly Perturbed Dynamical Systems , 1977 .

[18]  Zeev Schuss,et al.  Theory and Applications of Stochastic Differential Equations , 1980 .

[19]  C. Gardiner Handbook of Stochastic Methods , 1983 .

[20]  V. Maz'ya,et al.  Elliptic Boundary Value Problems , 1984 .

[21]  M. Dauge Elliptic Boundary Value Problems on Corner Domains: Smoothness and Asymptotics of Solutions , 1988 .

[22]  V. I. Fabrikant,et al.  Applications of Potential Theory in Mechanics: A Selection of New Results , 1989 .

[23]  R. Nicoll,et al.  The impact of postsynaptic calcium on synaptic transmission — its role in long-term potentiation , 1989, Trends in Neurosciences.

[24]  P. Hänggi,et al.  Reaction-rate theory: fifty years after Kramers , 1990 .

[25]  V. Fabrikant Mixed boundary value problem of potential theory in toroidal coordinates , 1991 .

[26]  V. I. Fabrikant,et al.  Mixed Boundary Value Problems of Potential Theory and Their Applications in Engineering , 1991 .

[27]  L. Arnold Stochastic Differential Equations: Theory and Applications , 1992 .

[28]  H. Sullivan Ionic Channels of Excitable Membranes, 2nd Ed. , 1992, Neurology.

[29]  R. Eisenberg,et al.  Diffusion as a chemical reaction: Stochastic trajectories between fixed concentrations , 1995 .

[30]  Mark Freidlin,et al.  Markov processes and differential equations , 1996 .

[31]  Amir Dembo,et al.  Large Deviations Techniques and Applications , 1998 .

[32]  Thierry Aubin,et al.  Some Nonlinear Problems in Riemannian Geometry , 1998 .

[33]  Vladimir Maz’ya,et al.  Spectral Problems Associated with Corner Singularities of Solutions to Elliptic Equations , 2000 .

[34]  Kevin Barraclough,et al.  I and i , 2001, BMJ : British Medical Journal.

[35]  A. Berezhkovskii,et al.  Kinetics of escape through a small hole , 2002 .

[36]  E. Vinogradova,et al.  Canonical Problems in Scattering and Potential Theory - Two volume set , 2002 .

[37]  Shin-Ho Chung,et al.  Reservoir boundaries in Brownian dynamics simulations of ion channels. , 2002, Biophysical Journal.

[38]  W. Im,et al.  Ions and counterions in a biological channel: a molecular dynamics simulation of OmpF porin from Escherichia coli in an explicit membrane with 1 M KCl aqueous salt solution. , 2002, Journal of molecular biology.

[39]  W. Im,et al.  Ion permeation and selectivity of OmpF porin: a theoretical study based on molecular dynamics, Brownian dynamics, and continuum electrodiffusion theory. , 2002, Journal of molecular biology.

[40]  J. Roßmann,et al.  Elliptic Boundary Value Problems in Domains with Point Singularities , 2002 .

[41]  R. Eisenberg,et al.  Three-Dimensional Continuum Simulations of Ion Transport Through Biological Ion Channels: Effect of Charge Distribution in the Constriction Region of Porin , 2002 .

[42]  George H. Weiss,et al.  Equilibration in two chambers connected by a capillary , 2003 .

[43]  R. Pinsky Asymptotics of the principal eigenvalue and expected hitting time for positive recurrent elliptic operators in a domain with a small puncture , 2003 .

[44]  M. Saraniti,et al.  Self-consistent particle-based simulations of three-dimensional ionic solutions , 2003 .

[45]  D Holcman,et al.  Calcium dynamics in dendritic spines and spine motility. , 2004, Biophysical journal.

[46]  Z. Schuss,et al.  Escape Through a Small Opening: Receptor Trafficking in a Synaptic Membrane , 2004 .

[47]  David Holcman,et al.  Dynamic regulation of spine–dendrite coupling in cultured hippocampal neurons , 2004, The European journal of neuroscience.

[48]  Z. Schuss,et al.  0 41 20 89 v 1 2 5 D ec 2 00 4 Stochastic Chemical Reactions in Micro-domains , 2008 .

[49]  Z. Schuss,et al.  Narrow Escape, Part III: Non-Smooth Domains and Riemann Surfaces , 2006 .

[50]  Paul Garabedian,et al.  Partial Differential Equations , 1964 .