Ten simple rules for writing a paper about scientific software
暂无分享,去创建一个
[1] Geir Kjetil Hanssen,et al. Automated Acceptance Testing: A Literature Review and an Industrial Case Study , 2008, Agile 2008 Conference.
[2] Randal S. Olson,et al. TPOT: A Tree-based Pipeline Optimization Tool for Automating Machine Learning , 2016, AutoML@ICML.
[3] Trang T. Le,et al. Scaling tree-based automated machine learning to biomedical big data with a feature set selector , 2019, Bioinform..
[4] Hyoungjoo Park,et al. Research software citation in the Data Citation Index: Current practices and implications for research software sharing and reuse , 2019, J. Informetrics.
[5] Kai Blin,et al. Ten Simple Rules for Taking Advantage of Git and GitHub , 2014, bioRxiv.
[6] Paul A Clemons,et al. The Connectivity Map: Using Gene-Expression Signatures to Connect Small Molecules, Genes, and Disease , 2006, Science.
[7] Andreas Prlic,et al. Ten Simple Rules for the Open Development of Scientific Software , 2012, PLoS Comput. Biol..
[8] Brent Thoma,et al. The Altmetric Score: A New Measure for Article-Level Dissemination and Impact. , 2015, Annals of emergency medicine.
[9] Paul Humphreys,et al. Extending Ourselves: Computational Science, Empiricism, and Scientific Method , 2004 .
[10] Casey S. Greene,et al. Recommendations to enhance rigor and reproducibility in biomedical research , 2020, GigaScience.
[11] M. Daly,et al. PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes , 2003, Nature Genetics.
[12] Jeffrey Chang,et al. Biopython: Python tools for computational biology , 2000, SIGB.
[13] David W. Brooks,et al. “Link rot” limits the usefulness of web‐based educational materials in biochemistry and molecular biology * , 2003 .
[14] Mariano J. Alvarez,et al. Network-based inference of protein activity helps functionalize the genetic landscape of cancer , 2016, Nature Genetics.
[15] Steven J. M. Jones,et al. Circos: an information aesthetic for comparative genomics. , 2009, Genome research.
[16] Stephan Druskat,et al. Software and Dependencies in Research Citation Graphs , 2019, Computing in Science & Engineering.
[17] Benjamin D Lee,et al. Ten simple rules for documenting scientific software , 2018, PLoS Comput. Biol..
[18] Gonçalo R. Abecasis,et al. The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..
[19] Darko Marinov,et al. Usage, costs, and benefits of continuous integration in open-source projects , 2016, 2016 31st IEEE/ACM International Conference on Automated Software Engineering (ASE).
[20] Erik Wilde,et al. Academic Search Engine Optimization (ASEO) , 2010 .
[21] Jason H. Moore,et al. TPOT-NN: augmenting tree-based automated machine learning with neural network estimators , 2020, Genetic Programming and Evolvable Machines.
[22] Gaël Varoquaux,et al. Scikit-learn: Machine Learning in Python , 2011, J. Mach. Learn. Res..
[23] Peter Ebert,et al. Ten Simple Rules for Developing Usable Software in Computational Biology , 2017, PLoS Comput. Biol..
[24] Morgan Taschuk,et al. Ten simple rules for making research software more robust , 2016, PLoS Comput. Biol..
[25] Piotr Sliz,et al. A Quick Guide to Software Licensing for the Scientist-Programmer , 2012, PLoS Comput. Biol..
[26] Jason Hennessey,et al. A cross disciplinary study of link decay and the effectiveness of mitigation techniques , 2013, BMC Bioinformatics.
[27] Manuel A. R. Ferreira,et al. PLINK: a tool set for whole-genome association and population-based linkage analyses. , 2007, American journal of human genetics.
[28] Gary D. Bader,et al. Ten Simple Rules for Developing Public Biological Databases , 2016, PLoS Comput. Biol..
[29] Ilkay Altintas,et al. Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks , 2019, PLoS Comput. Biol..
[30] Veronika Cheplygina,et al. Ten simple rules for getting started on Twitter as a scientist , 2020, PLoS Comput. Biol..