Crystal structure of glycoside hydrolase family 78 alpha-L-Rhamnosidase from Bacillus sp. GL1.

[1]  Kenji Yamamoto,et al.  Structural Basis of the Catalytic Reaction Mechanism of Novel 1,2-α-L-Fucosidase from Bifidobacterium bifidum* , 2007, Journal of Biological Chemistry.

[2]  B. Mikami,et al.  A novel glycoside hydrolase family 105: the structure of family 105 unsaturated rhamnogalacturonyl hydrolase complexed with a disaccharide in comparison with family 88 enzyme complexed with the disaccharide. , 2006, Journal of molecular biology.

[3]  B. Mikami,et al.  Crystallization and preliminary crystallographic analysis of the family GH78 alpha-L-rhamnosidase RhaB from Bacillus sp. GL1. , 2006, Acta crystallographica. Section F, Structural biology and crystallization communications.

[4]  J. Visser,et al.  Purification and characterization of an α-l-rhamnosidase from Aspergillus niger , 2006 .

[5]  B. Henrissat,et al.  Recent structural insights into the expanding world of carbohydrate-active enzymes. , 2005, Current opinion in structural biology.

[6]  I. Polikarpov,et al.  Crystal structures of beta-galactosidase from Penicillium sp. and its complex with galactose. , 2004, Journal of molecular biology.

[7]  L. Trindade,et al.  Production of bioavailable flavonoid glucosides in fruit juices and green tea by use of fungal alpha-L-rhamnosidases. , 2004, Journal of agricultural and food chemistry.

[8]  G. Ellenrieder,et al.  Fractionation of the naringinase complex from Aspergillus terreus by dye affinity chromatography , 2004, Biotechnology Letters.

[9]  B. Mikami,et al.  Crystal Structure of Unsaturated Glucuronyl Hydrolase, Responsible for the Degradation of Glycosaminoglycan, from Bacillus sp. GL1 at 1.8 Å Resolution* , 2004, Journal of Biological Chemistry.

[10]  G. Seifert,et al.  Nucleotide sugar interconversions and cell wall biosynthesis: how to bring the inside to the outside. , 2004, Current opinion in plant biology.

[11]  Masafumi Hidaka,et al.  Chitobiose phosphorylase from Vibrio proteolyticus, a member of glycosyl transferase family 36, has a clan GH-L-like (alpha/alpha)(6) barrel fold. , 2004, Structure.

[12]  B. Mattiasson,et al.  Two new thermostable α-l-rhamnosidases from a novel thermophilic bacterium , 2004 .

[13]  S. Kamitori,et al.  Structural Insights into Substrate Specificity and Function of Glucodextranase* , 2004, Journal of Biological Chemistry.

[14]  K. Murata,et al.  Molecular identification of an alpha-L-rhamnosidase from Bacillus sp strain GL1 as an enzyme involved in complete metabolism of gellan. , 2003, Archives of biochemistry and biophysics.

[15]  P. Reilly,et al.  Crystal structure and evolution of a prokaryotic glucoamylase. , 2003, Journal of molecular biology.

[16]  Thomas C. Terwilliger,et al.  Electronic Reprint Biological Crystallography Automated Main-chain Model Building by Template Matching and Iterative Fragment Extension , 2022 .

[17]  George M Sheldrick,et al.  Substructure solution with SHELXD. , 2002, Acta crystallographica. Section D, Biological crystallography.

[18]  H. van Tilbeurgh,et al.  Crystal structure of maltose phosphorylase from Lactobacillus brevis: unexpected evolutionary relationship with glucoamylases. , 2001, Structure.

[19]  J. Visser,et al.  Purification and Characterization of Two Different α-l-Rhamnosidases, RhaA and RhaB, fromAspergillus aculeatus , 2001, Applied and Environmental Microbiology.

[20]  B. Mikami,et al.  Crystal structure of N-acyl-D-glucosamine 2-epimerase from porcine kidney at 2.0 A resolution. , 2000, Journal of molecular biology.

[21]  P. Manzanares,et al.  Purification and characterization of an α‐ l‐rhamnosidase from Aspergillus nidulans , 2000 .

[22]  Thomas C. Terwilliger,et al.  Electronic Reprint Biological Crystallography Maximum-likelihood Density Modification , 2022 .

[23]  Michikatsu Sato,et al.  Purification and Characterization of an α-L-Rhamnosidase from Pichia angusta X349 , 2000, Bioscience, biotechnology, and biochemistry.

[24]  V. Zverlov,et al.  The thermostable α‐l‐rhamnosidase RamA of Clostridium stercorarium: biochemical characterization and primary structure of a bacterial α‐l‐rhamnoside hydrolase, a new type of inverting glycoside hydrolase , 2000, Molecular microbiology.

[25]  K. Watanabe,et al.  Purification and characterization of intracellular α-l-rhamnosidase from Pseudomonas paucimobilis FP2001 , 2000, Archives of Microbiology.

[26]  T. N. Bhat,et al.  The Protein Data Bank , 2000, Nucleic Acids Res..

[27]  D. Pal,et al.  Cis peptide bonds in proteins: residues involved, their conformations, interactions and locations. , 1999, Journal of molecular biology.

[28]  S. Kawai,et al.  Characterization of alpha-L-rhamnosidase of Bacillus sp. GL1 responsible for the complete depolymerization of gellan. , 1999, Archives of biochemistry and biophysics.

[29]  A. Jabs,et al.  Non-proline cis peptide bonds in proteins. , 1999, Journal of molecular biology.

[30]  C. Renard,et al.  Mode of action of RG-hydrolase and RG-lyase toward rhamnogalacturonan oligomers. Characterization of degradation products using RG-rhamnohydrolase and RG-galacturonohydrolase. , 1998, Carbohydrate research.

[31]  R J Read,et al.  Crystallography & NMR system: A new software suite for macromolecular structure determination. , 1998, Acta crystallographica. Section D, Biological crystallography.

[32]  Z. Dauter,et al.  Structure of glucoamylase from Saccharomycopsis fibuligera at 1.7 A resolution. , 1998, Acta crystallographica. Section D, Biological crystallography.

[33]  A. Voragen,et al.  Stereochemical course of hydrolysis catalysed by alpha-L-rhamnosyl and alpha-D-galacturonosyl hydrolases from Aspergillus aculeatus. , 1998, Biochemical and biophysical research communications.

[34]  K. Murata,et al.  alpha-L-rhamnosidase of Sphingomonas sp. R1 producing an unusual exopolysaccharide of sphingan. , 1998, Bioscience, biotechnology, and biochemistry.

[35]  P. Manzanares.  Purification and characterization of an α-?-rhamnosidase from Aspergillus niger , 1997 .

[36]  A. Drewnowski,et al.  Taste responses to naringin, a flavonoid, and the acceptance of grapefruit juice are related to genetic sensitivity to 6-n-propylthiouracil. , 1997, The American journal of clinical nutrition.

[37]  H. Kumagai,et al.  Microbial system for polysaccharide depolymerization: enzymatic route for gellan depolymerization by Bacillus sp. GL1. , 1997, Archives of biochemistry and biophysics.

[38]  Z. Otwinowski,et al.  [20] Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.

[39]  D. Kim,et al.  Purification and characterization of alpha-L-rhamnosidase from Bacteroides JY-6, a human intestinal bacterium. , 1996, Biological & pharmaceutical bulletin.

[40]  S. Steinbacher,et al.  Crystal structure of phage P22 tailspike protein complexed with Salmonella sp. O-antigen receptors. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[41]  C Sander,et al.  Mapping the Protein Universe , 1996, Science.

[42]  R. Dominguez,et al.  The crystal structure of endoglucanase CelA, a family 8 glycosyl hydrolase from Clostridium thermocellum. , 1996, Structure.

[43]  A. Voragen,et al.  Rhamnogalacturonan [alpha]-L-Rhamnopyranohydrolase (A Novel Enzyme Specific for the Terminal Nonreducing Rhamnosyl Unit in Rhamnogalacturonan Regions of Pectin) , 1994, Plant physiology.

[44]  J. Reiser,et al.  Isolation, characterization, and expression in Escherichia coli of the Pseudomonas aeruginosa rhlAB genes encoding a rhamnosyltransferase involved in rhamnolipid biosurfactant synthesis. , 1994, The Journal of biological chemistry.

[45]  S. Withers,et al.  Mechanisms of enzymatic glycoside hydrolysis. , 1994, Current opinion in structural biology.

[46]  J. Thornton,et al.  PROCHECK: a program to check the stereochemical quality of protein structures , 1993 .

[47]  A. Golubev,et al.  Crystal structure of glucoamylase from Aspergillus awamori var. X100 to 2.2-A resolution. , 1994, The Journal of biological chemistry.

[48]  P. Alzari,et al.  Three-dimensional structure of a thermostable bacterial cellulase , 1992, Nature.

[49]  D. Kasper,et al.  Structure of the complex group-specific polysaccharide of group B Streptococcus. , 1987, Biochemistry.

[50]  R. Tanaka,et al.  Synthesis of Some Disaccharides Containing an L-Rhamnopyranosyl or L-Mannopyranosyl Residue, and the Substrate-specificity of α-L-Rhamnosidase from Aspergillus niger , 1985 .

[51]  F. Percheron,et al.  α‐L‐Rhamnosidase de Fagopyrum esculentum , 1976 .

[52]  R. Bourbouze,et al.  [alpha-L-Rhamnosidase from Fagopyrum esculentum: purification and some properties (author's transl)]. , 1976, European journal of biochemistry.

[53]  G. N. Ramachandran,et al.  Conformation of polypeptides and proteins. , 1968, Advances in protein chemistry.