Pet111p, an Inner Membrane-bound Translational Activator That Limits Expression of the Saccharomyces cerevisiaeMitochondrial Gene COX2 *

The protein specified by the Saccharomyces cerevisiae nuclear gene PET111 specifically activates translation of the mitochondrially coded mRNA for cytochromec oxidase subunit II (Cox2p). We found Pet111p specifically in mitochondria of both wild-type cells and cells expressing a chromosomal gene for a functional epitope-tagged form of Pet111p. Pet111p was associated with mitochondrial membranes and was highly resistant to extraction with alkaline carbonate. Pet111p was protected from proteolytic digestion by the mitochondrial inner membrane. Thus, it is exposed only on the matrix side, where it could participate directly in organellar translation and localize Cox2p synthesis by virtue of its functional interaction with the COX2 mRNA 5′-untranslated leader. We also found that Pet111p is present at levels limiting the synthesis of Cox2p by examining the effect of alteredPET111 gene dosage in the nucleus on expression of a reporter gene, cox2::ARG8 m, that was inserted into mitochondrial DNA. The level of the reporter protein, Arg8p, was one-half that of wild type in a diploid strain heterozygous for a pet111 deletion mutation, whereas it was increased 2.8-fold in a strain bearing extra copies of PET111 on a high-copy plasmid. Thus, Pet111p could play dual roles in both membrane localization and regulation of Cox2p synthesis within mitochondria.

[1]  M. Yaffe Analysis of mitochondrial function and assembly. , 1991, Methods in enzymology.

[2]  M. Costanzo,et al.  Highly diverged homologs of Saccharomyces cerevisiae mitochondrial mRNA-specific translational activators have orthologous functions in other budding yeasts. , 2000, Genetics.

[3]  T. Fox,et al.  Expression of a recoded nuclear gene inserted into yeast mitochondrial DNA is limited by mRNA-specific translational activation. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[4]  M. Costanzo,et al.  Functional Interactions between Yeast Mitochondrial Ribosomes and mRNA 5′ Untranslated Leaders , 1998, Molecular and Cellular Biology.

[5]  B. Glick Pathways and energetics of mitochondrial protein import in Saccharomyces cerevisiae. , 1995, Methods in enzymology.

[6]  G M Manthey,et al.  The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron‐containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. , 1995, The EMBO journal.

[7]  F. Wollman,et al.  The biogenesis and assembly of photosynthetic proteins in thylakoid membranes1 , 1999, Biochimica et biophysica acta.

[8]  G. Mannhaupt,et al.  AAA proteases with catalytic sites on opposite membrane surfaces comprise a proteolytic system for the ATP‐dependent degradation of inner membrane proteins in mitochondria. , 1996, The EMBO journal.

[9]  L. Grivell,et al.  Mss51p, a putative translational activator of cytochrome c oxidase subunit-1 (COX1) mRNA, is required for synthesis of Cox1p in Saccharomyces cerevisiae , 2000, Current Genetics.

[10]  M. Costanzo,et al.  Suppression of a defect in the 5' untranslated leader of mitochondrial COX3 mRNA by a mutation affecting an mRNA-specific translational activator protein , 1993, Molecular and cellular biology.

[11]  R. Kuras,et al.  Translation of cytochrome f is autoregulated through the 5' untranslated region of petA mRNA in Chlamydomonas chloroplasts. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[12]  A. Myers,et al.  Yeast/E. coli shuttle vectors with multiple unique restriction sites , 1986, Yeast.

[13]  B. Futcher,et al.  The Cln3‐Cdc28 kinase complex of S. cerevisiae is regulated by proteolysis and phosphorylation. , 1992, The EMBO journal.

[14]  A. Myers,et al.  Genetics of mitochondrial biogenesis. , 1986, Annual review of biochemistry.

[15]  M. Costanzo,et al.  Analysis of the Saccharomyces cerevisiae mitochondrial COX3 mRNA 5' untranslated leader: translational activation and mRNA processing , 1995, Molecular and cellular biology.

[16]  T. Fox,et al.  Accumulation of mitochondrially synthesized Saccharomyces cerevisiae Cox2p and Cox3p depends on targeting information in untranslated portions of their mRNAs , 1998, The EMBO journal.

[17]  A. Newton,et al.  Posttranscriptional regulation of Caulobacter flagellin genes by a late flagellum assembly checkpoint , 1997, Journal of bacteriology.

[18]  T. Fox,et al.  Genetic transformation of Saccharomyces cerevisiae mitochondria. , 2001, Methods in cell biology.

[19]  R. Hallberg,et al.  Cytochromes c 1 and b 2 are sorted to the intermembrane space of yeast mitochondria by a stop-transfer mechanism , 1992, Cell.

[20]  B. Przybyla-Zawislak,et al.  The Saccharomyces cerevisiae Pet309 protein is embedded in the mitochondrial inner membrane. , 1998, European journal of biochemistry.

[21]  T. Fox,et al.  Alteration of the Saccharomyces cerevisiae COX2 mRNA 5'-untranslated leader by mitochondrial gene replacement and functional interaction with the translational activator protein PET111. , 1993, Molecular biology of the cell.

[22]  P. Brown,et al.  Exploring the metabolic and genetic control of gene expression on a genomic scale. , 1997, Science.

[23]  M. Costanzo,et al.  Specific translational activation by nuclear gene products occurs in the 5' untranslated leader of a yeast mitochondrial mRNA. , 1988, Proceedings of the National Academy of Sciences of the United States of America.

[24]  D. Botstein,et al.  Isolation of the β-tubulin gene from yeast and demonstration of its essential function in vivo , 1983, Cell.

[25]  K. H. White,et al.  Inactivation of YME1, a Member of the ftsH-SEC18-PAS1-CDC48 Family of Putative ATPase-Encoding Genes, Causes Increased Escape of DNA from Mitochondria in Saccharomyces cerevisiae , 1993, Molecular and cellular biology.

[26]  G. Schatz,et al.  The biogenesis of mitochondria. , 1970, The Biochemical journal.

[27]  T. Fox,et al.  PET111 acts in the 5'-leader of the Saccharomyces cerevisiae mitochondrial COX2 mRNA to promote its translation. , 1993, Genetics.

[28]  T. Fox,et al.  COX3 mRNA-specific translational activator proteins are associated with the inner mitochondrial membrane in Saccharomyces cerevisiae. , 1993, The Journal of biological chemistry.

[29]  Y. Fujiki,et al.  Isolation of intracellular membranes by means of sodium carbonate treatment: application to endoplasmic reticulum , 1982, The Journal of cell biology.

[30]  T. Fox,et al.  Saccharomyces cerevisiae positive regulatory gene PET111 encodes a mitochondrial protein that is translated from an mRNA with a long 5' leader , 1987, Molecular and cellular biology.

[31]  J. Pinkham,et al.  T7 RNA polymerase-dependent expression of COXII in yeast mitochondria , 1994, Molecular and cellular biology.

[32]  E. Harlow,et al.  Antibodies: A Laboratory Manual , 1988 .

[33]  M. Costanzo,et al.  Interactions among three proteins that specifically activate translation of the mitochondrial COX3 mRNA in Saccharomyces cerevisiae , 1994, Molecular and cellular biology.

[34]  L. Pon,et al.  Isolation of highly purified mitochondria from Saccharomyces cerevisiae. , 1995, Methods in enzymology.

[35]  M. Costanzo,et al.  Analysis and manipulation of yeast mitochondrial genes. , 1991, Methods in enzymology.

[36]  M. Johnston,et al.  Isolation and characterization of the ZWF1 gene of Saccharomyces cerevisiae, encoding glucose-6-phosphate dehydrogenase. , 1990, Gene.

[37]  M. Costanzo,et al.  Control of mitochondrial gene expression in Saccharomyces cerevisiae. , 1990, Annual review of genetics.

[38]  P Argos,et al.  Prediction of transmembrane segments in proteins utilising multiple sequence alignments. , 1994, Journal of molecular biology.

[39]  Patrick Argos,et al.  Topology prediction of membrane proteins , 1996, Protein science : a publication of the Protein Society.

[40]  G. Fink,et al.  Methods in yeast genetics , 1979 .

[41]  L. Grivell,et al.  Mitochondrial assembly in yeast , 1999, FEBS letters.

[42]  Eve DakeS,et al.  Purification and properties of the major nuclease from mitochondria of Saccharomyces cerevisiae. , 1988, The Journal of biological chemistry.

[43]  T. Fox,et al.  PET111, a Saccharomyces cerevisiae nuclear gene required for translation of the mitochondrial mRNA encoding cytochrome c oxidase subunit II. , 1987, Genetics.