Optimizing automated characterization of liver fibrosis histological images by investigating color spaces at different resolutions

Texture analysis (TA) of histological images has recently received attention as an automated method of characterizing liver fibrosis. The colored staining methods used to identify different tissue components reveal various patterns that contribute in different ways to the digital texture of the image. A histological digital image can be represented with various color spaces. The approximation processes of pixel values that are carried out while converting between different color spaces can affect image texture and subsequently could influence the performance of TA. Conventional TA is carried out on grey scale images, which are a luminance approximation to the original RGB (Red, Green, and Blue) space. Currently, grey scale is considered sufficient for characterization of fibrosis but this may not be the case for sophisticated assessment of fibrosis or when resolution conditions vary. This paper investigates the accuracy of TA results on three color spaces, conventional grey scale, RGB, and Hue-Saturation-Intensity (HSI), at different resolutions. The results demonstrate that RGB is the most accurate in texture classification of liver images, producing better results, most notably at low resolution. Furthermore, the green channel, which is dominated by collagen fiber deposition, appears to provide most of the features for characterizing fibrosis images. The HSI space demonstrated a high percentage error for the majority of texture methods at all resolutions, suggesting that this space is insufficient for fibrosis characterization. The grey scale space produced good results at high resolution; however, errors increased as resolution decreased.

[1]  Michal Strzelecki,et al.  MaZda - A software package for image texture analysis , 2009, Comput. Methods Programs Biomed..

[2]  C.-H. Yu,et al.  Universal colour quantisation for different colour spaces , 2006 .

[3]  Neill W Campbell,et al.  Using Colour Gabor Texture Features for Scene Understanding , 1999 .

[4]  Klaus Kayser,et al.  Texture- and object-related automated information analysis in histological still images of various organs. , 2008, Analytical and quantitative cytology and histology.

[5]  Matti Pietikäinen,et al.  Classification with color and texture: jointly or separately? , 2004, Pattern Recognit..

[6]  Andrzej Materka,et al.  Texture analysis for magnetic resonance imaging , 2006 .

[7]  Christoph Palm,et al.  Color texture classification by integrative Co-occurrence matrices , 2004, Pattern Recognit..

[8]  Haim H. Permuter,et al.  A study of Gaussian mixture models of color and texture features for image classification and segmentation , 2006, Pattern Recognit..

[9]  F. Cendes,et al.  Texture analysis of medical images. , 2004, Clinical radiology.

[10]  Olivier Alata,et al.  Choice of a pertinent color space for color texture characterization using parametric spectral analysis , 2011, Pattern Recognit..

[11]  Amr Amin,et al.  Zizyphus spina-christi protects against carbon tetrachloride-induced liver fibrosis in rats. , 2009, Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association.

[12]  G. Kayser,et al.  Theory of sampling and its application in tissue based diagnosis , 2009, Diagnostic pathology.

[13]  Amr Amin,et al.  Texture analysis of liver fibrosis microscopic images: a study on the effect of biomarkers. , 2011, Acta biochimica et biophysica Sinica.

[14]  Peter Hufnagl,et al.  Image standards in Tissue-Based Diagnosis (Diagnostic Surgical Pathology) , 2008, Diagnostic pathology.

[15]  Doaa Mahmoud-Ghoneim,et al.  Texture analysis of magnetic resonance images of rat muscles during atrophy and regeneration. , 2006, Magnetic resonance imaging.

[16]  Paul F. Whelan,et al.  Experiments in colour texture analysis , 2001, Pattern Recognit. Lett..

[17]  G. Collewet,et al.  Influence of MRI acquisition protocols and image intensity normalization methods on texture classification. , 2004, Magnetic resonance imaging.

[18]  Omar S. Al-Kadi,et al.  Texture measures combination for improved meningioma classification of histopathological images , 2010, Pattern Recognit..

[19]  S. Hubscher Histological Assessment of the Liver , 2007 .