Msp1/ATAD1 maintains mitochondrial function by facilitating the degradation of mislocalized tail‐anchored proteins

The majority of ER‐targeted tail‐anchored (TA) proteins are inserted into membranes by the Guided Entry of Tail‐anchored protein (GET) system. Disruption of this system causes a subset of TA proteins to mislocalize to mitochondria. We show that the AAA+ ATPase Msp1 limits the accumulation of mislocalized TA proteins on mitochondria. Deletion of MSP1 causes the Pex15 and Gos1 TA proteins to accumulate on mitochondria when the GET system is impaired. Likely as a result of failing to extract mislocalized TA proteins, yeast with combined mutation of the MSP1 gene and the GET system exhibit strong synergistic growth defects and severe mitochondrial damage, including loss of mitochondrial DNA and protein and aberrant mitochondrial morphology. Like yeast Msp1, human ATAD1 limits the mitochondrial mislocalization of PEX26 and GOS28, orthologs of Pex15 and Gos1, respectively. GOS28 protein level is also increased in ATAD1−/− mouse tissues. Therefore, we propose that yeast Msp1 and mammalian ATAD1 are conserved members of the mitochondrial protein quality control system that might promote the extraction and degradation of mislocalized TA proteins to maintain mitochondrial integrity.

[1]  I. Bobylev The role of mitochondria in the pathogenesis of chemotherapy-induced peripheral neuropathy , 2016 .

[2]  P. Walter,et al.  The conserved AAA-ATPase Msp1 confers organelle specificity to tail-anchored proteins , 2014, Proceedings of the National Academy of Sciences.

[3]  Manuel Serrano,et al.  The Hallmarks of Aging , 2013, Cell.

[4]  M. J. López-Armada,et al.  Mitochondrial dysfunction and the inflammatory response. , 2013, Mitochondrion.

[5]  J. Szczepanowska,et al.  Protein quality control in organelles - AAA/FtsH story. , 2013, Biochimica et biophysica acta.

[6]  T. Schwarz,et al.  The pathways of mitophagy for quality control and clearance of mitochondria , 2012, Cell Death and Differentiation.

[7]  Vladimir Denic A portrait of the GET pathway as a surprisingly complicated young man. , 2012, Trends in biochemical sciences.

[8]  Claire Redin,et al.  A Mitochondrial Pyruvate Carrier Required for Pyruvate Uptake in Yeast, Drosophila, and Humans , 2012, Science.

[9]  Christine Klein,et al.  Pharmacological Rescue of Mitochondrial Deficits in iPSC-Derived Neural Cells from Patients with Familial Parkinson’s Disease , 2012, Science Translational Medicine.

[10]  J. Adjaye,et al.  Preparation of Mouse Embryonic Fibroblast Cells Suitable for Culturing Human Embryonic and Induced Pluripotent Stem Cells , 2012, Journal of visualized experiments : JoVE.

[11]  E. Rugarli,et al.  Mitochondrial quality control: a matter of life and death for neurons , 2012, The EMBO journal.

[12]  S. Gygi,et al.  Identification of a protein mediating respiratory supercomplex stability. , 2012, Cell metabolism.

[13]  T. Langer,et al.  Mitochondrial AAA proteases--towards a molecular understanding of membrane-bound proteolytic machines. , 2012, Biochimica et biophysica acta.

[14]  Robert J. Keenan,et al.  Tail-anchored membrane protein insertion into the endoplasmic reticulum , 2011, Nature Reviews Molecular Cell Biology.

[15]  Benedikt Westermann,et al.  A mitochondrial-focused genetic interaction map reveals a scaffold-like complex required for inner membrane organization in mitochondria , 2011, The Journal of cell biology.

[16]  J. Rutter,et al.  Mitochondrial quality control by the ubiquitin-proteasome system. , 2011, Biochemical Society transactions.

[17]  R. Hegde,et al.  The mechanism of membrane-associated steps in tail-anchored protein insertion , 2011, Nature.

[18]  R. Youle,et al.  Regulating mitochondrial outer membrane proteins by ubiquitination and proteasomal degradation. , 2011, Current opinion in cell biology.

[19]  R. Hegde,et al.  Protein Targeting and Degradation are Coupled for Elimination of Mislocalized Proteins , 2011, Nature.

[20]  Robert T Sauer,et al.  AAA+ proteases: ATP-fueled machines of protein destruction. , 2011, Annual review of biochemistry.

[21]  T. Noguchi,et al.  Sustained Elongation of Sperm Tail Promoted by Local Remodeling of Giant Mitochondria in Drosophila , 2011, Current Biology.

[22]  M. Mattson,et al.  The AAA+ ATPase Thorase Regulates AMPA Receptor-Dependent Synaptic Plasticity and Behavior , 2011, Cell.

[23]  S. Fang,et al.  The AAA-ATPase p97 is essential for outer mitochondrial membrane protein turnover , 2011, Molecular biology of the cell.

[24]  R. Youle,et al.  Proteasome and p97 mediate mitophagy and degradation of mitofusins induced by Parkin , 2010, The Journal of cell biology.

[25]  Edward L. Huttlin,et al.  A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression , 2010, Cell.

[26]  S. Gygi,et al.  A stress-responsive system for mitochondrial protein degradation. , 2010, Molecular cell.

[27]  Fei Wang,et al.  A chaperone cascade sorts proteins for posttranslational membrane insertion into the endoplasmic reticulum. , 2010, Molecular cell.

[28]  R. Hegde,et al.  A Ribosome-Associating Factor Chaperones Tail-Anchored Membrane Proteins , 2010, Nature.

[29]  C. Suloway,et al.  Structural characterization of the Get4/Get5 complex and its interaction with Get3 , 2010, Proceedings of the National Academy of Sciences.

[30]  M. Patti,et al.  The role of mitochondria in the pathogenesis of type 2 diabetes. , 2010, Endocrine reviews.

[31]  Gary D Bader,et al.  The Genetic Landscape of a Cell , 2010, Science.

[32]  R. Youle,et al.  Mechanisms of mitophagy , 2010, Nature Reviews Molecular Cell Biology.

[33]  Steven P. Gygi,et al.  SDH5, a Gene Required for Flavination of Succinate Dehydrogenase, Is Mutated in Paraganglioma , 2009, Science.

[34]  N. Bonini,et al.  Maintaining the brain: insight into human neurodegeneration from Drosophila melanogaster mutants , 2009, Nature Reviews Genetics.

[35]  S. Collins,et al.  Comprehensive Characterization of Genes Required for Protein Folding in the Endoplasmic Reticulum , 2009, Science.

[36]  Blanche Schwappach,et al.  The GET Complex Mediates Insertion of Tail-Anchored Proteins into the ER Membrane , 2008, Cell.

[37]  Guido Kroemer,et al.  Tumor cell metabolism: cancer's Achilles' heel. , 2008, Cancer cell.

[38]  R. Youle,et al.  Outer mitochondrial membrane protein degradation by the proteasome. , 2010, Novartis Foundation symposium.

[39]  M. Mann,et al.  Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips , 2007, Nature Protocols.

[40]  R. Hegde,et al.  Identification of a Targeting Factor for Posttranslational Membrane Protein Insertion into the ER , 2007, Cell.

[41]  Steven P Gygi,et al.  Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry , 2007, Nature Methods.

[42]  I. Boldogh,et al.  Purification and subfractionation of mitochondria from the yeast Saccharomyces cerevisiae. , 2007, Methods in cell biology.

[43]  R. Hegde,et al.  Transmembrane topogenesis of a tail‐anchored protein is modulated by membrane lipid composition , 2005, The EMBO journal.

[44]  P. Hanson,et al.  AAA+ proteins: have engine, will work , 2005, Nature Reviews Molecular Cell Biology.

[45]  R. Hardy,et al.  Dynamics of spermiogenesis in Drosophila melanogaster , 2004, Zeitschrift für Zellforschung und Mikroskopische Anatomie.

[46]  Jimena Weibezahn,et al.  Characterization of a Trap Mutant of the AAA+ Chaperone ClpB* , 2003, Journal of Biological Chemistry.

[47]  S. Colombo,et al.  The tale of tail-anchored proteins , 2003, The Journal of cell biology.

[48]  E. Pedrazzini,et al.  Translocation of the C Terminus of a Tail-anchored Protein across the Endoplasmic Reticulum Membrane in Yeast Mutants Defective in Signal Peptide-driven Translocation* , 2003, The Journal of Biological Chemistry.

[49]  C. Stirling,et al.  Tail-anchored protein insertion into yeast ER requires a novel posttranslational mechanism which is independent of the SEC machinery. , 2002, Biochemistry.

[50]  Stefan Fritz,et al.  Genetic basis of mitochondrial function and morphology in Saccharomyces cerevisiae. , 2002, Molecular biology of the cell.

[51]  T. Lithgow,et al.  Targeting of C‐Terminal (Tail)‐Anchored Proteins: Understanding how Cytoplasmic Activities are Anchored to Intracellular Membranes , 2001, Traffic.

[52]  V. Kushnirov Rapid and reliable protein extraction from yeast , 2000, Yeast.

[53]  J. Mccusker,et al.  Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae , 1999, Yeast.

[54]  B. Zemelman,et al.  Gos1p, a Saccharomyces cerevisiae SNARE protein involved in Golgi transport , 1998, FEBS letters.

[55]  P. Philippsen,et al.  Additional modules for versatile and economical PCR‐based gene deletion and modification in Saccharomyces cerevisiae , 1998, Yeast.

[56]  R. Müller,et al.  Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. , 1995, Gene.

[57]  T A Rapoport,et al.  Transport route for synaptobrevin via a novel pathway of insertion into the endoplasmic reticulum membrane. , 1995, The EMBO journal.

[58]  P. Philippsen,et al.  New heterologous modules for classical or PCR‐based gene disruptions in Saccharomyces cerevisiae , 1994, Yeast.

[59]  K. H. White,et al.  Mitochondrial morphological and functional defects in yeast caused by yme1 are suppressed by mutation of a 26S protease subunit homologue. , 1994, Molecular biology of the cell.

[60]  H. Matsubara,et al.  Intramitochondrial protein sorting. Isolation and characterization of the yeast MSP1 gene which belongs to a novel family of putative ATPases. , 1993, The Journal of biological chemistry.

[61]  K. H. White,et al.  Inactivation of YME1, a Member of the ftsH-SEC18-PAS1-CDC48 Family of Putative ATPase-Encoding Genes, Causes Increased Escape of DNA from Mitochondria in Saccharomyces cerevisiae , 1993, Molecular and cellular biology.

[62]  R. Schiestl,et al.  Improved method for high efficiency transformation of intact yeast cells. , 1992, Nucleic acids research.

[63]  K. Tokuyasu Dynamics of spermiogenesis in Drosophila melanogaster. VI. Significance of "onion" nebenkern formation. , 1975, Journal of ultrastructure research.