The molecular and functional characterization of an Opaque2 homologue gene from Coix and a new classification of plant bZIP proteins

[1]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[2]  M. Holdsworth,et al.  The wheat transcriptional activator SPA: a seed-specific bZIP protein that recognizes the GCN4-like motif in the bifactorial endosperm box of prolamin genes. , 1997, The Plant cell.

[3]  S. Rogers,et al.  PEST sequences and regulation by proteolysis. , 1996, Trends in biochemical sciences.

[4]  Richard D. Thompson,et al.  Regulation of cytosolic pyruvate, orthophosphate dikinase expression in developing maize endosperm , 1996, Plant Molecular Biology.

[5]  B. Keller,et al.  In vitro binding of the tomato bZIP transcriptional activator VSF-1 to a regulatory element that controls xylem-specific gene expression. , 1996, The Plant journal : for cell and molecular biology.

[6]  K. Ohmiya,et al.  A rice bZIP protein, designated OSBZ8, is rapidly induced by abscisic acid. , 1996, The Plant journal : for cell and molecular biology.

[7]  N. Suzuki,et al.  A maize DNA-binding factor with a bZIP motif is induced by low temperature , 1995, Molecular and General Genetics MGG.

[8]  R. T. Nagao,et al.  Isolation of two soybean G-box binding factors which interact with a G-box sequence of an auxin-responsive gene. , 1995, The Plant journal : for cell and molecular biology.

[9]  P. Arruda,et al.  The involvement of Opaque 2 on β-prolamin gene regulation in maize and Coix suggests a more general role for this transcriptional activator , 1995, Plant Molecular Biology.

[10]  J. Thompson,et al.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.

[11]  B. Müller-Hill,et al.  Replacement of invariant bZip residues within the basic region of the yeast transcriptional activator GCN4 can change its DNA binding specificity. , 1994, Nucleic acids research.

[12]  M. Giroux,et al.  Coordinated Transcriptional Regulation of Storage Product Genes in the Maize Endosperm , 1994, Plant physiology.

[13]  R. Foster,et al.  The rice bZIP transcriptional activator RITA-1 is highly expressed during seed development. , 1994, The Plant cell.

[14]  F. Katagiri,et al.  bZIP proteins bind to a palindromic sequence without an ACGT core located in a seed-specific element of the pea lectin promoter. , 1994, The Plant journal : for cell and molecular biology.

[15]  S. Rosahl,et al.  Analysis of the Involvement of ocs-Like bZip-Binding Elements in the Differential Strength of the Bidirectional mas1[prime]2[prime] Promoter , 1994, Plant physiology.

[16]  E. Lam,et al.  TGA3 is a distinct member of the TGA family of bZIP transcription factors in Arabidopsis thaliana , 1994, Plant Molecular Biology.

[17]  A. Sakamoto,et al.  The HBP-1 family of wheat basic/leucine zipper proteins interacts with overlapping cis-acting hexamer motifs of plant histone genes. , 1994, The Journal of biological chemistry.

[18]  W. Gruissem,et al.  Novel conserved sequence motifs in plant G-box binding proteins and implications for interactive domains. , 1994, Nucleic acids research.

[19]  Richard D. Thompson,et al.  Structural and functional analysis of an Opaque-2-related gene from sorghum , 1994, Plant Molecular Biology.

[20]  R. Foster,et al.  Plant bZIP proteins gather at ACGT elements , 1994, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[21]  P. Arruda,et al.  The transcriptional activator Opaque2 recognizes two different target sequences in the 22-kD-like alpha-prolamin genes. , 1994, The Plant cell.

[22]  P. Johnson.  Identification of C/EBP basic region residues involved in DNA sequence recognition and half-site spacing preference , 1993, Molecular and cellular biology.

[23]  K. Murakawa,et al.  A new human ribosomal protein sequence, homologue of rat L9. , 1993, Nucleic acids research.

[24]  K. Aguan,et al.  Low-temperature-dependent expression of a rice gene encoding a protein with a leucine-zipper motif , 1993, Molecular and General Genetics MGG.

[25]  R. Foster,et al.  Plant bZIP protein DNA binding specificity. , 1993, Journal of molecular biology.

[26]  P. Arruda,et al.  Sequence analysis of 22 kDa-like α-coixin genes and their comparison with homologous zein and kafirin genes reveals highly conserved protein structure and regulatory elements , 1993, Plant Molecular Biology.

[27]  B. Müller-Hill,et al.  Identification of three residues in the basic regions of the bZIP proteins GCN4, C/EBP and TAF‐1 that are involved in specific DNA binding. , 1993, The EMBO journal.

[28]  R. Schmidt,et al.  OHP1: a maize basic domain/leucine zipper protein that interacts with opaque2. , 1993, The Plant cell.

[29]  F. Katagiri,et al.  Identification of a novel dimer stabilization region in a plant bZIP transcription activator , 1992, Molecular and cellular biology.

[30]  A. Cashmore,et al.  TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG. , 1992, The Plant cell.

[31]  R. Schmidt,et al.  Opaque-2 is a transcriptional activator that recognizes a specific target site in 22-kD zein genes. , 1992, The Plant cell.

[32]  J R Ecker,et al.  Heterodimerization between light‐regulated and ubiquitously expressed Arabidopsis GBF bZIP proteins. , 1992, The EMBO journal.

[33]  P. Arruda,et al.  Partial purification and characterization of lysine-ketoglutarate reductase in normal and opaque-2 maize endosperms. , 1992, Plant physiology.

[34]  L. Klimczak,et al.  DNA binding activity of the Arabidopsis G-box binding factor GBF1 is stimulated by phosphorylation by casein kinase II from broccoli. , 1992, The Plant cell.

[35]  K. Aguan,et al.  Isolation of genes for low-temperature-induced proteins in rice by a simple subtractive method , 1991 .

[36]  I. Potrykus,et al.  Isolation and molecular characterization of PosF21, an Arabidopsis thaliana gene which shows characteristics of a b-Zip class transcription factor. , 1991, The Plant journal : for cell and molecular biology.

[37]  P. S. Kim,et al.  X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil. , 1991, Science.

[38]  B. Weisshaar,et al.  Light‐inducible and constitutively expressed DNA‐binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. , 1991, The EMBO journal.

[39]  F. Salamini,et al.  The maize regulatory locus Opaque‐2 encodes a DNA‐binding protein which activates the transcription of the b‐32 gene. , 1991, The EMBO journal.

[40]  L. Pinna.  Casein kinase 2: an 'eminence grise' in cellular regulation? , 1990, Biochimica et biophysica acta.

[41]  J. Tokuhisa,et al.  OCSBF-1, a maize ocs enhancer binding factor: isolation and expression during development. , 1990, The Plant cell.

[42]  S. R. Turcinelli,et al.  Phylogenetic relationship of zeins and coixins as determined by immunological cross-reactivity and Southern blot analysis , 1990, Plant Molecular Biology.

[43]  P. Bucher.  Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences. , 1990, Journal of molecular biology.

[44]  F. Salamini,et al.  The O2 gene which regulates zein deposition in maize endosperm encodes a protein with structural homologies to transcriptional activators. , 1989, The EMBO journal.

[45]  B. Larkins,et al.  The opaque-2 mutation of maize differentially reduces zein gene transcription. , 1989, The Plant cell.

[46]  Richard D. Thompson,et al.  Molecular cloning of the o2-m5 allele of Zea mays using transposon marking , 1988, Molecular and General Genetics MGG.

[47]  B. Burr,et al.  Transposon tagging and molecular analysis of the maize regulatory locus opaque-2. , 1987, Science.

[48]  E. Bresnick,et al.  Northern hybridization analysis of RNA using diethylpyrocarbonate-treated nonfat milk. , 1986, Analytical biochemistry.

[49]  R Staden,et al.  An interactive graphics program for comparing and aligning nucleic acid and amino acid sequences. , 1982, Nucleic acids research.

[50]  A. Dalby,et al.  Ribonuclease Activity in the Developing Seeds of Normal and Opaque-2 Maize , 1967, Science.

[51]  D. E. Alexander,et al.  Ribonuclease Activity in Normal and Opaque-2 Mutant Endosperm of Maize , 1967, Science.

[52]  F. Skoog,et al.  A revised medium for rapid growth and bio assays with tobacco tissue cultures , 1962 .

[53]  P. Arruda,et al.  The Transcriptional Activator Opaque2 Recognizes Two Different Target Sequences in the 22-kD-like a-Prolamin Genes , 2002 .

[54]  P. Ciceri,et al.  Phosphorylation of Opaque2 changes diurnally and impacts its DNA binding activity. , 1997, The Plant cell.

[55]  A. Lupas.  Prediction and analysis of coiled-coil structures. , 1996, Methods in enzymology.

[56]  T. Werner,et al.  MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data. , 1995, Nucleic acids research.

[57]  H. Hurst.  Transcription factors 1: bZIP proteins. , 1995, Protein profile.

[58]  P. Arruda,et al.  The role of the Opaque2 transcriptional factor in the regulation of protein accumulation and amino acid metabolism in maize seeds. , 1994, Anais da Academia Brasileira de Ciencias.

[59]  D. Verma,et al.  Opaque-2 and zein gene expression. , 1993 .

[60]  P. Arruda,et al.  Synthesis and deposition of coixin in seeds of Coix lacryma-jobi , 1992 .

[61]  B. Burr,et al.  Maize regulatory gene opaque-2 encodes a protein with a "leucine-zipper" motif that binds to zein DNA. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[62]  W. D. Clayton.  Notes on the tribe Andropogoneae (Gramineae). , 1980 .

[63]  R. Hodges,et al.  Tropomyosin: Amino Acid Sequence and Coiled-Coil Structure , 1973 .