Proteomics for Allergy: from Proteins to the Patients
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Sébastien Brier | Philippe Moingeon | S. Brier | P. Moingeon | Armelle Martelet | E. Nony | M. Le Mignon | A. Martelet | Emmanuel Nony | Maxime Le Mignon | Armelle Martelet
[1] J. Bousquet,et al. A WAO - ARIA - GA²LEN consensus document on molecular-based allergy diagnostics , 2013, The World Allergy Organization journal.
[2] S. Musser,et al. Confirmation of the allergenic peanut protein, Ara h 1, in a model food matrix using liquid chromatography/tandem mass spectrometry (LC/MS/MS). , 2004, Journal of agricultural and food chemistry.
[3] L L Needham,et al. Isotope dilution--mass spectrometric quantification of specific proteins: model application with apolipoprotein A-I. , 1996, Clinical chemistry.
[4] Rosa Pilolli,et al. Multi-allergen detection in food by micro high-performance liquid chromatography coupled to a dual cell linear ion trap mass spectrometry. , 2014, Journal of chromatography. A.
[5] Jimmy Lin,et al. Cancer proteomics: developments in technology, clinical use and commercialization , 2015, Expert review of proteomics.
[6] Analysis of Conformational and Sequential IgE Epitopes on the Major Allergen Cry j 2 of Japanese Cedar (Cryptomeria japonica) Pollen in Humans by Using Monoclonal Antibodies for Cry j 2 , 2013, Journal of Clinical Immunology.
[7] The Uniprot Consortium,et al. UniProt: a hub for protein information , 2014, Nucleic Acids Res..
[8] S. Durham,et al. Efficacy and safety of sublingual immunotherapy with grass allergen tablets for seasonal allergic rhinoconjunctivitis. , 2006, Journal of Allergy and Clinical Immunology.
[9] M. Gajhede,et al. Dominating IgE-Binding Epitope of Bet v 1, the Major Allergen of Birch Pollen, Characterized by X-ray Crystallography and Site-Directed Mutagenesis , 2003, The Journal of Immunology.
[10] T. Casale,et al. Surveying the new Allergic and hypersensitivity conditions chapter of the International Classification of Diseases (ICD)‐11 , 2016, Allergy.
[11] S. Durham,et al. Functional rather than immunoreactive levels of IgG4 correlate closely with clinical response to grass pollen immunotherapy , 2012, Allergy.
[12] S. Durham,et al. Efficacy and safety of specific immunotherapy with SQ allergen extract in treatment-resistant seasonal allergic rhinoconjunctivitis. , 2006, The Journal of allergy and clinical immunology.
[13] R. Van Ree,et al. Quadrupole time-of-flight mass spectrometry: a method to study the actual expression of allergen isoforms identified by PCR cloning. , 2002, The Journal of allergy and clinical immunology.
[14] M. Chapman,et al. Epitope mapping of two major inhalant allergens, Der p I and Der f I, from mites of the genus Dermatophagoides. , 1987, Journal of immunology.
[15] F. Altmann,et al. N-Glycan analysis by matrix-assisted laser desorption/ionization mass spectrometry of electrophoretically separated nonmammalian proteins: application to peanut allergen Ara h 1 and olive pollen allergen Ole e 1. , 2000, Analytical biochemistry.
[16] H. R. Anderson,et al. Global map of the prevalence of symptoms of rhinoconjunctivitis in children: The International Study of Asthma and Allergies in Childhood (ISAAC) Phase Three , 2009, Allergy.
[17] H. Niall. Automated Edman degradation: the protein sequenator. , 1973, Methods in enzymology.
[18] J. Bousquet,et al. Advances in allergen-microarray technology for diagnosis and monitoring of allergy: the MeDALL allergen-chip. , 2014, Methods.
[19] A. Louise,et al. A regulatory dendritic cell signature correlates with the clinical efficacy of allergen-specific sublingual immunotherapy. , 2012, The Journal of allergy and clinical immunology.
[20] R. Valenta,et al. Identification of multiple T cell epitopes on Bet v I, the major birch pollen allergen, using specific T cell clones and overlapping peptides. , 1993, Journal of immunology.
[21] Ciara K O'Sullivan,et al. Ultrasensitive aptamer based detection of β-conglutin food allergen. , 2014, Food chemistry.
[22] Yu-Fang Jin,et al. Transformative Impact of Proteomics on Cardiovascular Health and Disease: A Scientific Statement From the American Heart Association , 2015, Circulation.
[23] R. Moritz,et al. Structural studies on the allergen Der p1 from the house dust mite Dermatophagoides pteronyssinus: similarity with cysteine proteinases. , 1989, Protein sequences & data analysis.
[24] P. Moingeon,et al. Identification of Novel Short Ragweed Pollen Allergens Using Combined Transcriptomic and Immunoproteomic Approaches , 2015, PloS one.
[25] H. Løwenstein,et al. Quantitative Immunoelectrophoretic Methods as a Tool for the Analysis and Isolation of Allergens , 1978 .
[26] T. Casale,et al. Clinical efficacy of 300IR 5-grass pollen sublingual tablet in a US study: the importance of allergen-specific serum IgE. , 2012, The Journal of allergy and clinical immunology.
[27] H. Malling,et al. Optimal dose, efficacy, and safety of once-daily sublingual immunotherapy with a 5-grass pollen tablet for seasonal allergic rhinitis. , 2007, The Journal of allergy and clinical immunology.
[28] V. Özenci,et al. Rapid identification of bacteria from positive blood culture bottles by MALDI-TOF MS following short-term incubation on solid media. , 2015, Journal of medical microbiology.
[29] F. Chew,et al. NMR Structure and IgE Epitopes of Blo t 21, a Major Dust Mite Allergen from Blomia tropicalis* , 2012, The Journal of Biological Chemistry.
[30] K. Ogura,et al. NMR study on the major mite allergen Der f 2: its refined tertiary structure, epitopes for monoclonal antibodies and characteristics shared by ML protein group members. , 2005, Journal of biochemistry.
[31] M. Hornshaw,et al. Absolute quantification of allergens from complex mixtures: a new sensitive tool for standardization of allergen extracts for specific immunotherapy. , 2011, Journal of proteome research.
[32] R. Arnon,et al. Structural basis of antigenic specificity and design of new vaccines , 1992, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[33] Julie Snow,et al. How to Proceed , 2015 .
[34] M. Calderón,et al. An evidence-based appraisal of the surrogate markers of efficacy of allergen immunotherapy , 2011, Current opinion in allergy and clinical immunology.
[35] H. Malling,et al. Clinical efficacy of sublingual and subcutaneous birch pollen allergen‐specific immunotherapy: a randomized, placebo‐controlled, double‐blind, double‐dummy study , 2004, Allergy.
[36] A. Dell,et al. Differential immunogenicity and allergenicity of native and recombinant human lactoferrins: Role of glycosylation , 2013, European journal of immunology.
[37] D. Coote,et al. Evaluation of a capsulated hydrophilic carrier polymer (the ImmunoCAP) for measurement of specific IgE antibodies , 1990, Allergy.
[38] S. Krause,et al. Detection and structural characterization of natural Ara h 7, the third peanut allergen of the 2S albumin family. , 2010, Journal of proteome research.
[39] R. Aalberse. Clinical relevance of carbohydrate allergen epitopes , 1998, Allergy.
[40] M. van den Berg,et al. IgE epitopes on the cat (Felis domesticus) major allergen Fel d I: a study with overlapping synthetic peptides. , 1994, The Journal of allergy and clinical immunology.
[41] F. Palmisano,et al. Identification of allergenic milk proteins markers in fined white wines by capillary liquid chromatography-electrospray ionization-tandem mass spectrometry. , 2010, Journal of chromatography. A.
[42] M. Shamji,et al. Predictive biomarkers of clinical efficacy of allergen-specific immunotherapy: how to proceed. , 2013, Immunotherapy.
[43] L. Klimek,et al. New opportunities for allergen immunotherapy using synthetic peptide immuno-regulatory epitopes (SPIREs) , 2016, Expert review of clinical immunology.
[44] D. DeMets,et al. Biomarkers and surrogate endpoints: Preferred definitions and conceptual framework , 2001, Clinical pharmacology and therapeutics.
[45] Y. Wang,et al. Same Day Identification and Full Panel Antimicrobial Susceptibility Testing of Bacteria from Positive Blood Culture Bottles Made Possible by a Combined Lysis-Filtration Method with MALDI-TOF VITEK Mass Spectrometry and the VITEK2 System , 2014, PloS one.
[46] D. Postma,et al. Paving the way of systems biology and precision medicine in allergic diseases: the MeDALL success story , 2016, Allergy.
[47] S. Durham,et al. Effect of grass pollen immunotherapy with Alutard SQ® on quality of life in seasonal allergic rhinoconjunctivitis , 2007, Allergy.
[48] Ravi V. Kolla,et al. Previously undescribed grass pollen antigens are the major inducers of T helper 2 cytokine-producing T cells in allergic individuals , 2013, Proceedings of the National Academy of Sciences.
[49] H. Løwenstein. Quantitative immunoelectrophoretic methods as a tool for the analysis and isolation of allergens. , 1978, Progress in allergy.
[50] P. Briza,et al. Standardization of allergen products: 2. Detailed characterization of GMP‐produced recombinant Phl p 5.0109 as European Pharmacopoeia reference standard , 2016, Allergy.
[51] P. Moingeon,et al. Identification of the cysteine protease Amb a 11 as a novel major allergen from short ragweed. , 2015, The Journal of allergy and clinical immunology.
[52] M. Villalba,et al. Cross-reactivity between the major allergen from olive pollen and unrelated glycoproteins: evidence of an epitope in the glycan moiety of the allergen. , 1996, The Journal of allergy and clinical immunology.
[53] S. Spector,et al. Allergen immunotherapy: a practice parameter third update. , 2007, The Journal of allergy and clinical immunology.
[54] W. Minor,et al. Molecular Determinants for Antibody Binding on Group 1 House Dust Mite Allergens* , 2011, The Journal of Biological Chemistry.
[55] R. Esch,et al. Immunotherapy Preparation Guidelines, Rules, and Regulation , 2013, Current Allergy and Asthma Reports.
[56] F. Felici,et al. Defining a protective epitope on factor H binding protein, a key meningococcal virulence factor and vaccine antigen , 2013, Proceedings of the National Academy of Sciences.
[57] S. Vieths,et al. High-Affinity IgE Recognition of a Conformational Epitope of the Major Respiratory Allergen Phl p 2 As Revealed by X-Ray Crystallography1 , 2009, The Journal of Immunology.
[58] M. Pallardy,et al. Changes in markers associated with dendritic cells driving the differentiation of either TH2 cells or regulatory T cells correlate with clinical benefit during allergen immunotherapy. , 2016, The Journal of allergy and clinical immunology.
[59] F. Chew,et al. Patterns of IgE sensitization in house dust mite‐allergic patients: implications for allergen immunotherapy , 2016, Allergy.
[60] Dong-Gi Lee,et al. Quantitation of soybean allergens using tandem mass spectrometry. , 2011, Journal of proteome research.
[61] Ahmed Gomaa,et al. Simultaneous detection of multi-allergens in an incurred food matrix using ELISA, multiplex flow cytometry and liquid chromatography mass spectrometry (LC-MS). , 2015, Food chemistry.
[62] K. Hoffmann‐Sommergruber,et al. Isoforms of Bet v 1, the Major Birch Pollen Allergen, Analyzed by Liquid Chromatography, Mass Spectrometry, and cDNA Cloning (*) , 1995, The Journal of Biological Chemistry.
[63] Uwe Christians,et al. Liquid chromatography and mass spectrometry in food allergen detection. , 2011, Journal of food protection.
[64] Steve L Taylor,et al. Mass spectrometric analysis of allergens in roasted walnuts. , 2016, Journal of proteomics.
[65] J. Greenbaum,et al. T-cell epitope conservation across allergen species is a major determinant of immunogenicity. , 2016, The Journal of allergy and clinical immunology.
[66] C. Mohan,et al. Biomarkers in rheumatic diseases: how can they facilitate diagnosis and assessment of disease activity? , 2015, BMJ : British Medical Journal.
[67] P. Moingeon. Biomarkers for Allergen Immunotherapy: A "Panoromic" View. , 2016, Immunology and allergy clinics of North America.
[68] H. Niall. [36] Automated edman degradation: The protein sequenator , 1973 .
[69] P. Blumberg,et al. Absolute quantitation of endogenous proteins with precision and accuracy using a capillary Western system. , 2013, Analytical biochemistry.
[70] J. McGready,et al. Performance and Pain Tolerability of Current Diagnostic Allergy Skin Prick Test Devices. , 2015, The journal of allergy and clinical immunology. In practice.
[71] P. Devillier,et al. Early onset of action of a 5-grass-pollen 300-IR sublingual immunotherapy tablet evaluated in an allergen challenge chamber. , 2009, The Journal of allergy and clinical immunology.
[72] A. Sheikh,et al. EAACI: A European Declaration on Immunotherapy. Designing the future of allergen specific immunotherapy , 2012, Clinical and Translational Allergy.
[73] Mark R. Trusheim,et al. Stratified medicine: strategic and economic implications of combining drugs and clinical biomarkers , 2007, Nature Reviews Drug Discovery.
[74] P. Roepstorff,et al. Determination of Isoforms, N-Linked Glycan Structure and Disulfide Bond Linkages of the Major Cat Allergen Fel d1 by a Mass Spectrometric Approach , 1997, Biological chemistry.
[75] R. Ree. The create project: EU support for the improvement of allergen standardization in Europe , 2004 .
[76] S. Vieths,et al. Standardization of allergen products: 3. Validation of candidate European Pharmacopoeia standard methods for quantification of major birch allergen Bet v 1 , 2016, Allergy.
[77] J. J. Robinson,et al. Biomolecular characterization of allergenic proteins in snow crab (Chionoecetes opilio) and de novo sequencing of the second allergen arginine kinase using tandem mass spectrometry. , 2011, Journal of proteomics.
[78] Qian Zhang,et al. Epitope mapping of a 95 kDa antigen in complex with antibody by solution-phase amide backbone hydrogen/deuterium exchange monitored by Fourier transform ion cyclotron resonance mass spectrometry. , 2011, Analytical chemistry.
[79] E. Meltzer,et al. The prevalence of nasal symptoms attributed to allergies in the United States: findings from the burden of rhinitis in an America survey. , 2008, Allergy and asthma proceedings.
[80] F. Spertini,et al. Api m 6: a new bee venom allergen. , 2001, The Journal of allergy and clinical immunology.
[81] R. Rustandi,et al. Automated capillary Western dot blot method for the identity of a 15-valent pneumococcal conjugate vaccine. , 2015, Analytical biochemistry.
[82] S. Wenzel,et al. Asthma outcomes: biomarkers. , 2012, The Journal of allergy and clinical immunology.
[83] P. Matricardi,et al. Rhinitis , sinusitis , and upper airway disease The effect of component-resolved diagnosis on specific immunotherapy prescription in children with hay fever , 2022 .
[84] Gerald M Rubin,et al. Defining the mandate of proteomics in the post-genomics era: workshop report. , 2002, Molecular & cellular proteomics : MCP.
[85] J. Lay,et al. Rapid identification of bacteria based on spectral patterns using MALDI-TOFMS. , 2000, Methods in molecular biology.
[86] Graham M Lord,et al. Immune biomarkers: the promises and pitfalls of personalized medicine , 2015, Nature Reviews Immunology.
[87] R. Kumar,et al. The Prevalence, Severity, and Distribution of Childhood Food Allergy in the United States , 2011, Pediatrics.
[88] Stephan Seifert,et al. Matrix-assisted laser desorption/ionization mass spectrometric investigation of pollen and their classification by multivariate statistics. , 2012, Rapid communications in mass spectrometry : RCM.
[89] C. Radauer,et al. Update of the WHO/IUIS Allergen Nomenclature Database based on analysis of allergen sequences , 2014, Allergy.
[90] Massimo Natale,et al. Cow's milk allergens identification by two-dimensional immunoblotting and mass spectrometry. , 2004, Molecular nutrition & food research.
[91] S. Durham,et al. Sublingual grass allergen tablet immunotherapy provides sustained clinical benefit with progressive immunologic changes over 2 years. , 2008, The Journal of allergy and clinical immunology.
[92] S. Paczesny. Discovery and validation of graft-versus-host disease biomarkers. , 2011, Blood.
[93] K. Meno. Allergen structures and epitopes , 2011, Allergy.
[94] M. Ernst,et al. Phl p 3: Structural and immunological characterization of a major allergen of timothy grass pollen , 2006, Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology.
[95] Dean Clarke,et al. Next generation of food allergen quantification using mass spectrometric systems. , 2014, Journal of proteome research.
[96] C. López-Otín,et al. The amino acid sequence of Ole e I, the major allergen from olive tree (Olea europaea) pollen. , 1993, European journal of biochemistry.
[97] A. Luxen,et al. Activation Mechanism of Recombinant Der p 3 Allergen Zymogen , 2008, Journal of Biological Chemistry.
[98] L. Elviri,et al. Use of specific peptide biomarkers for quantitative confirmation of hidden allergenic peanut proteins Ara h 2 and Ara h 3/4 for food control by liquid chromatography–tandem mass spectrometry , 2007, Analytical and bioanalytical chemistry.
[99] R. Valenta,et al. Mapping of Conformational IgE Epitopes with Peptide-Specific Monoclonal Antibodies Reveals Simultaneous Binding of Different IgE Antibodies to a Surface Patch on the Major Birch Pollen Allergen, Bet v 1 , 2011, The Journal of Immunology.
[100] R. Van Ree,et al. Standardization of allergen products: 1. Detailed characterization of GMP‐produced recombinant Bet v 1.0101 as biological reference preparation , 2009, Allergy.
[101] Scott H Sicherer,et al. Clinical reviews in allergy and immunology , 2022 .
[102] A. Roussel,et al. Development and evaluation of a sublingual tablet based on recombinant Bet v 1 in birch pollen‐allergic patients , 2015, Allergy.
[103] S. Tuske,et al. Epitope mapping by amide hydrogen/deuterium exchange coupled with immobilization of antibody, on-line proteolysis, liquid chromatography and mass spectrometry. , 2009, Rapid communications in mass spectrometry : RCM.
[104] Damian J. Houde,et al. Conformational analysis of recombinant monoclonal antibodies with hydrogen/deuterium exchange mass spectrometry. , 2013, Methods in molecular biology.
[105] Andrew N Hoofnagle,et al. The fundamental flaws of immunoassays and potential solutions using tandem mass spectrometry. , 2009, Journal of immunological methods.
[106] K. Ruxrungtham,et al. The House Dust Mite Major Allergen Der p 23 Displays O-Glycan-Independent IgE Reactivities but No Chitin-Binding Activity , 2016, International Archives of Allergy and Immunology.
[107] T. Platts-Mills,et al. Drug allergens and food--the cetuximab and galactose-α-1,3-galactose story. , 2014, Annals of allergy, asthma & immunology : official publication of the American College of Allergy, Asthma, & Immunology.
[108] P. Moingeon. Update on immune mechanisms associated with sublingual immunotherapy: practical implications for the clinician. , 2013, The journal of allergy and clinical immunology. In practice.
[109] H. Malling,et al. Sustained efficacy and safety of a 300IR daily dose of a sublingual solution of birch pollen allergen extract in adults with allergic rhinoconjunctivitis: results of a double-blind, placebo-controlled study , 2014, Clinical and Translational Allergy.
[110] E. Ezan,et al. Mass spectrometric investigation of molecular variability of grass pollen group 1 allergens. , 2009, Journal of proteome research.
[111] W. Minor,et al. Crystal structures of mite allergens Der f 1 and Der p 1 reveal differences in surface-exposed residues that may influence antibody binding. , 2009, Journal of molecular biology.
[112] A. Ponsonby,et al. Food , drug , insect sting allergy , and anaphylaxis Skin prick test responses and allergen-specific IgE levels as predictors of peanut , egg , and sesame allergy in infants , 2022 .
[113] H. Bennich,et al. Immunoglobulin E. A new class of human immunoglobulin. , 1968, Journal of Immunology.