Integrative analysis of the zinc finger transcription factor Lame duck in the Drosophila myogenic gene regulatory network
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Ting Ni | Ivan Ovcharenko | Di Huang | Martha L Bulyk | A. Michelson | M. Bulyk | I. Ovcharenko | Caitlin E. Gamble | S. Gisselbrecht | Leila Shokri | Jun Zhu | B. Busser | Ting Ni | Di Huang | K. Rogacki | E. Lane | Jun Zhu | Leila Shokri | Elizabeth A Lane | Brian W Busser | Kevin R Rogacki | Caitlin E Gamble | Stephen S Gisselbrecht | Alan M Michelson | T. Ni
[1] Dustin E. Schones,et al. High-Resolution Profiling of Histone Methylations in the Human Genome , 2007, Cell.
[2] Hongkai Ji,et al. A comparative analysis of genome-wide chromatin immunoprecipitation data for mammalian transcription factors , 2006, Nucleic acids research.
[3] H. S. Kang,et al. Functional analysis of the zinc finger and activation domains of Glis3 and mutant Glis3(NDH1) , 2008, Nucleic acids research.
[4] A. Michelson,et al. Invertebrate myogenesis: looking back to the future of muscle development. , 2001, Current opinion in genetics & development.
[5] S. Carroll,et al. From DNA to Diversity: Molecular Genetics and the Evolution of Animal Design , 2000 .
[6] A. Michelson,et al. Differential regulation of mesodermal gene expression by Drosophila cell type-specific Forkhead transcription factors , 2012, Development.
[7] Michael P. Eichenlaub,et al. Combinatorial Binding Leads to Diverse Regulatory Responses: Lmd Is a Tissue-Specific Modulator of Mef2 Activity , 2010, PLoS genetics.
[8] A. Philippakis,et al. Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificities , 2006, Nature Biotechnology.
[9] Martha L. Bulyk,et al. UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein–DNA interactions , 2010, Nucleic Acids Res..
[10] R. Renkawitz-Pohl,et al. Blown fuse regulates stretching and outgrowth but not myoblast fusion of the circular visceral muscles in Drosophila. , 2006, Differentiation; research in biological diversity.
[11] Martha L. Bulyk,et al. Molecular mechanism underlying the regulatory specificity of a Drosophila homeodomain protein that specifies myoblast identity , 2012, Development.
[12] A. Barski,et al. Genomic location analysis by ChIP‐Seq , 2009, Journal of cellular biochemistry.
[13] B. Bernstein,et al. Charting histone modifications and the functional organization of mammalian genomes , 2011, Nature Reviews Genetics.
[14] John M Westlund,et al. Genome-wide discovery of human heart enhancers. , 2010, Genome research.
[15] E. Davidson. The Regulatory Genome: Gene Regulatory Networks In Development And Evolution , 2006 .
[16] K. Jagla,et al. Diversification of muscle types: recent insights from Drosophila. , 2010, Experimental cell research.
[17] Hanh T. Nguyen,et al. Drosophila MEF2, a transcription factor that is essential for myogenesis. , 1995, Genes & development.
[18] Ivan Ovcharenko,et al. A Machine Learning Approach for Identifying Novel Cell Type–Specific Transcriptional Regulators of Myogenesis , 2012, PLoS genetics.
[19] J. Baker,et al. Mutation Detection by Real-Time PCR: A Simple, Robust and Highly Selective Method , 2009, PloS one.
[20] Mikael Bodén,et al. MEME Suite: tools for motif discovery and searching , 2009, Nucleic Acids Res..
[21] E. Furlong,et al. Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development , 2012, Nature Genetics.
[22] M. Suster,et al. myoblasts incompetent encodes a zinc finger transcription factor required to specify fusion-competent myoblasts in Drosophila. , 2002, Development.
[23] Stephen S. Gisselbrecht,et al. Combinatorial signaling codes for the progressive determination of cell fates in the Drosophila embryonic mesoderm. , 1998, Genes & development.
[24] E. Furlong,et al. A core transcriptional network for early mesoderm development in Drosophila melanogaster. , 2007, Genes & development.
[25] Brian E. Richardson,et al. Myoblast Fusion in Fly and Vertebrates: New Genes, New Processes and New Perspectives , 2008, Traffic.
[26] Marc S Halfon,et al. An Integrated Strategy for Analyzing the Unique Developmental Programs of Different Myoblast Subtypes , 2006, PLoS genetics.
[27] Hanh T. Nguyen,et al. Drosophila Lame duck, a novel member of the Gli superfamily, acts as a key regulator of myogenesis by controlling fusion-competent myoblast development. , 2001, Development.
[28] A. Michelson,et al. Toward a systems-level understanding of developmental regulatory networks. , 2008, Current opinion in genetics & development.
[29] G. Church,et al. Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset , 2005, Genome Biology.
[30] Timothy R Hughes,et al. Conserved expression without conserved regulatory sequence: the more things change, the more they stay the same. , 2010, Trends in genetics : TIG.
[31] A. Michelson,et al. Two forkhead transcription factors regulate the division of cardiac progenitor cells by a Polo-dependent pathway. , 2012, Developmental cell.
[32] Anthony A. Philippakis,et al. Expression-Guided In Silico Evaluation of Candidate Cis Regulatory Codes for Drosophila Muscle Founder Cells , 2006, PLoS Comput. Biol..
[33] Victor X Jin,et al. E2F in vivo binding specificity: comparison of consensus versus nonconsensus binding sites. , 2008, Genome research.
[34] Daniel E. Newburger,et al. Diversity and Complexity in DNA Recognition by Transcription Factors , 2009, Science.
[35] Robert L. Grossman,et al. A cis-regulatory map of the Drosophila genome , 2011, Nature.
[36] M. Bate,et al. twist: A Myogenic Switch in Drosophila , 1996, Science.
[37] E. Furlong,et al. Combinatorial binding predicts spatio-temporal cis-regulatory activity , 2009, Nature.
[38] Richard G. Jenner,et al. Genome-wide analysis of cAMP-response element binding protein occupancy, phosphorylation, and target gene activation in human tissues. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[39] Michael P. Eichenlaub,et al. A temporal map of transcription factor activity: mef2 directly regulates target genes at all stages of muscle development. , 2006, Developmental cell.
[40] K. White,et al. Patterns of Gene Expression During Drosophila Mesoderm Development , 2001, Science.
[41] S. Tapscott,et al. MyoD and the transcriptional control of myogenesis. , 2005, Seminars in cell & developmental biology.
[42] M. Ruiz-Gómez. Muscle patterning and specification in Drosophila. , 1998, The International journal of developmental biology.