Copyright © 1997, American Society for Microbiology A Family of Ammonium Transporters in

Ammonium is a nitrogen source supporting growth of yeast cells at an optimal rate. We recently reported the first characterization of an NH4+ transport protein (Mep1p) in Saccharomyces cerevisiae. Here we describe the characterization of two additional NH4+ transporters, Mep2p and Mep3p, both of which are highly similar to Mep1p. The Mep2 protein displays the highest affinity for NH4+ (Km, 1 to 2 microM), followed closely by Mep1p (Km, 5 to 10 microM) and finally by Mep3p, whose affinity is much lower (Km, approximately 1.4 to 2.1 mM). A strain lacking all three MEP genes cannot grow on media containing less than 5 mM NH4+ as the sole nitrogen source, while the presence of individual NH4+ transporters enables growth on these media. Yet, the three Mep proteins are not essential for growth on NH4+ at high concentrations (>20 mM). Feeding experiments further indicate that the Mep transporters are also required to retain NH4+ inside cells during growth on at least some nitrogen sources other than NH4+. The MEP genes are subject to nitrogen control. In the presence of a good nitrogen source, all three MEP genes are repressed. On a poor nitrogen source, MEP2 expression is much higher than MEP1 and MEP3 expression. High-level MEP2 transcription requires at least one of the two GATA family factors Gln3p and Nil1p, which are involved in transcriptional activation of many other nitrogen-regulated genes. In contrast, expression of either MEP1 or MEP3 requires only Gln3p and is unexpectedly down-regulated in a Nil1p-dependent manner. Analysis of databases suggests that families of NH4+ transporters exist in other organisms as well.

[1]  J. Jauniaux,et al.  Gzf3p, a fourth GATA factor involved in nitrogen‐regulated transcription in Saccharomyces cerevisiae , 1997, Molecular microbiology.

[2]  S. Wölfl,et al.  Two glucose transporters in Saccharomyces cerevisiae are glucose sensors that generate a signal for induction of gene expression. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[3]  R. Fleischmann,et al.  Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii , 1996, Science.

[4]  W. Frommer,et al.  Preferential expression of an ammonium transporter and of two putative nitrate transporters in root hairs of tomato. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[5]  B. Eikmanns,et al.  Functional and Genetic Characterization of the (Methyl)ammonium Uptake Carrier of Corynebacterium glutamicum(*) , 1996, The Journal of Biological Chemistry.

[6]  T. Cooper,et al.  Gat1p, a GATA family protein whose production is sensitive to nitrogen catabolite repression, participates in transcriptional activation of nitrogen-catabolic genes in Saccharomyces cerevisiae , 1996, Molecular and cellular biology.

[7]  Sayaka,et al.  Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions. , 1996, DNA research : an international journal for rapid publication of reports on genes and genomes.

[8]  B. André,et al.  An overview of membrane transport proteins in Saccharomyces cerevisiae , 1995, Yeast.

[9]  B. Magasanik,et al.  Role of the GATA factors Gln3p and Nil1p of Saccharomyces cerevisiae in the expression of nitrogen-regulated genes. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[10]  B. André,et al.  NPI1, an essential yeast gene involved in induced degradation of Gap1 and Fur4 permeases, encodes the Rsp5 ubiquitin—protein ligase , 1995, Molecular microbiology.

[11]  M. Ciriacy,et al.  Identification of novel HXT genes in Saccharomyces cerevisiae reveals the impact of individual hexose transporters on qlycolytic flux , 1995, Molecular microbiology.

[12]  M. Johnston,et al.  Three different regulatory mechanisms enable yeast hexose transporter (HXT) genes to be induced by different levels of glucose , 1995, Molecular and cellular biology.

[13]  M. Jacquet,et al.  XIV. Yeast sequencing reports. A 43·5 kb segment of yeast chromosome XIV, which contains MFA2, MEP2, CAP/SRV2, NAM9, FKB1/FPR1/RBP1, MOM22 and CPT1, predicts an adenosine deaminase gene and 14 new open reading frames , 1995 .

[14]  P. Philippsen,et al.  New heterologous modules for classical or PCR‐based gene disruptions in Saccharomyces cerevisiae , 1994, Yeast.

[15]  M. Borodovsky,et al.  Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. , 1994, Nucleic acids research.

[16]  J. Jauniaux,et al.  Identification of a high affinity NH4+ transporter from plants. , 1994, The EMBO journal.

[17]  B. André,et al.  Cloning and expression of the MEP1 gene encoding an ammonium transporter in Saccharomyces cerevisiae. , 1994, The EMBO journal.

[18]  P Argos,et al.  Prediction of transmembrane segments in proteins utilising multiple sequence alignments. , 1994, Journal of molecular biology.

[19]  R. Durbin,et al.  2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans , 1994, Nature.

[20]  B. Rost,et al.  Prediction of protein secondary structure at better than 70% accuracy. , 1993, Journal of molecular biology.

[21]  Gerald R. Fink,et al.  Guide to yeast genetics and molecular biology , 1993 .

[22]  H. Liang,et al.  Roles of multiple glucose transporters in Saccharomyces cerevisiae , 1993, Molecular and cellular biology.

[23]  A. Kruckeberg,et al.  Yeast sugar transporters. , 1993, Critical reviews in biochemistry and molecular biology.

[24]  J. Pont,et al.  Molecular Aspects of Transport Proteins , 1992 .

[25]  M. Grenson Chapter 7 Amino acid transporters in yeast: structure, function and regulation , 1992 .

[26]  M. Labouesse,et al.  A family of low and high copy replicative, integrative and single‐stranded S. cerevisiae/E. coli shuttle vectors , 1991, Yeast.

[27]  R. Rothstein Targeting, disruption, replacement, and allele rescue: integrative DNA transformation in yeast. , 1991, Methods in enzymology.

[28]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.

[29]  M. White,et al.  Leucine-zipper motif update , 1989, Nature.

[30]  N. Saitou,et al.  The neighbor-joining method: a new method for reconstructing phylogenetic trees. , 1987, Molecular biology and evolution.

[31]  M. Grenson,et al.  Nitrogen catabolite repression in yeasts and filamentous fungi. , 1985, Advances in microbial physiology.

[32]  J. Devereux,et al.  A comprehensive set of sequence analysis programs for the VAX , 1984, Nucleic Acids Res..

[33]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[34]  M. Grenson Inactivation-reactivation process and repression of permease formation regulate several ammonia-sensitive permeases in the yeast Saccharomyces cerevisiae. , 1983, European journal of biochemistry.

[35]  K. Murata,et al.  Transformation of intact yeast cells treated with alkali cations , 1983 .

[36]  R. Doolittle,et al.  A simple method for displaying the hydropathic character of a protein. , 1982, Journal of molecular biology.

[37]  J. Bennetzen,et al.  Codon selection in yeast. , 1982, The Journal of biological chemistry.

[38]  M. Grenson,et al.  A cis-dominant regulatory mutation linked to the argB-argC gene cluster in Saccharomyces cerevisiae. , 1980, Journal of molecular biology.

[39]  G. Fink,et al.  Methods in yeast genetics , 1979 .

[40]  R. H. Baltz,et al.  Genetics of Industrial Microorganisms , 1979 .

[41]  F. Sanger,et al.  DNA sequencing with chain-terminating inhibitors. , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[42]  M. Grenson,et al.  Multiplicity of the Amino Acid Permeases in Saccharomyces cerevisiae IV. Evidence for a General Amino Acid Permease , 1970 .

[43]  M. Grenson,et al.  Multiplicity of the amino acid permeases in Saccharomyces cerevisiae. IV. Evidence for a general amino acid permease. , 1966, Journal of bacteriology.

[44]  C. Tabor [137] The determination of NH3 with the use of glutamic dehydrogenase , 1970 .

[45]  M. Grenson,et al.  Mutations affecting the repressibility of arginine biosynthetic enzymes in Saccharomyces cerevisiae. , 1970, European journal of biochemistry.

[46]  M. Grenson,et al.  Multiplicity of the amino acid permeases in Saccharomyces cerevisiae. I. Evidence for a specific arginine-transporting system. , 1966, Biochimica et Biophysica Acta.

[47]  O. H. Lowry,et al.  Protein measurement with the Folin phenol reagent. , 1951, The Journal of biological chemistry.