A Novel Three-Phase Model of Brain Tissue Microstructure

We propose a novel biologically constrained three-phase model of the brain microstructure. Designing a realistic model is tantamount to a packing problem, and for this reason, a number of techniques from the theory of random heterogeneous materials can be brought to bear on this problem. Our analysis strongly suggests that previously developed two-phase models in which cells are packed in the extracellular space are insufficient representations of the brain microstructure. These models either do not preserve realistic geometric and topological features of brain tissue or preserve these properties while overestimating the brain's effective diffusivity, an average measure of the underlying microstructure. In light of the highly connected nature of three-dimensional space, which limits the minimum diffusivity of biologically constrained two-phase models, we explore the previously proposed hypothesis that the extracellular matrix is an important factor that contributes to the diffusivity of brain tissue. Using accurate first-passage-time techniques, we support this hypothesis by showing that the incorporation of the extracellular matrix as the third phase of a biologically constrained model gives the reduction in the diffusion coefficient necessary for the three-phase model to be a valid representation of the brain microstructure.

[1]  Karel Segeth,et al.  A model of effective diffusion and tortuosity in the extracellular space of the brain. , 2004, Biophysical journal.

[2]  Salvatore Torquato,et al.  Efficient simulation technique to compute effective properties of heterogeneous media , 1989 .

[3]  S. Prokopová-Kubinová,et al.  Extracellular space diffusion and pathological states. , 2000, Progress in brain research.

[4]  G. Wnek,et al.  Encyclopedia of biomaterials and biomedical engineering , 2008 .

[5]  Charles Nicholson,et al.  Diffusion and related transport mechanisms in brain tissue , 2001 .

[6]  S. Torquato,et al.  Diffusion of finite‐sized Brownian particles in porous media , 1992 .

[7]  C. Nicholson,et al.  Changes in brain cell shape create residual extracellular space volume and explain tortuosity behavior during osmotic challenge. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[8]  A. Telser Molecular Biology of the Cell, 4th Edition , 2002 .

[9]  Effective conductivity of composites containing spheroidal inclusions: Comparison of simulations with theory , 1993 .

[10]  Charles Nicholson,et al.  In vivo diffusion analysis with quantum dots and dextrans predicts the width of brain extracellular space. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[11]  S Torquato,et al.  Packing, tiling, and covering with tetrahedra. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[12]  C. Nicholson,et al.  Cell cavities increase tortuosity in brain extracellular space. , 2005, Journal of theoretical biology.

[13]  Thomas M Truskett,et al.  Is random close packing of spheres well defined? , 2000, Physical review letters.

[14]  S. Torquato,et al.  Multiplicity of Generation, Selection, and Classification Procedures for Jammed Hard-Particle Packings † , 2001 .

[15]  D. Kullmann,et al.  Geometric and viscous components of the tortuosity of the extracellular space in the brain. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[16]  Diffusion and tissue microstructure , 2004 .

[17]  Robert M. Miura,et al.  A Lattice Cellular Automata Model for Ion Diffusion in the Brain-Cell Microenvironment and Determination of Tortuosity and Volume Fraction , 1999, SIAM J. Appl. Math..

[18]  T. Secomb,et al.  Effect of cell arrangement and interstitial volume fraction on the diffusivity of monoclonal antibodies in tissue. , 1993, Biophysical journal.

[19]  Torquato,et al.  Relationship between permeability and diffusion-controlled trapping constant of porous media. , 1990, Physical review letters.

[20]  Torquato,et al.  Link between the conductivity and elastic moduli of composite materials. , 1993, Physical review letters.

[21]  A. Szafer,et al.  An analytical model of restricted diffusion in bovine optic nerve , 1997, Magnetic resonance in medicine.

[22]  R. Siegel,et al.  A new Monte Carlo approach to diffusion in constricted porous geometries , 1986 .

[23]  B. Alberts,et al.  Molecular Biology of the Cell 4th edition , 2007 .

[24]  G. Lawler,et al.  Effect of cytoskeletal geometry on intracellular diffusion. , 1989, Biophysical journal.

[25]  Andrej Cherkaev,et al.  On the effective conductivity of polycrystals and a three‐dimensional phase‐interchange inequality , 1988 .

[26]  J. Davies,et al.  Molecular Biology of the Cell , 1983, Bristol Medico-Chirurgical Journal.

[27]  Salvatore Torquato,et al.  Rigorous link between fluid permeability, electrical conductivity, and relaxation times for transport in porous media , 1991 .

[28]  Salvatore Torquato,et al.  New Conjectural Lower Bounds on the Optimal Density of Sphere Packings , 2006, Exp. Math..

[29]  S. Torquato,et al.  Random Heterogeneous Materials: Microstructure and Macroscopic Properties , 2005 .

[30]  C. Nicholson,et al.  Maximum geometrical hindrance to diffusion in brain extracellular space surrounding uniformly spaced convex cells. , 2004, Journal of theoretical biology.

[31]  C. Nicholson,et al.  Contribution of dead-space microdomains to tortuosity of brain extracellular space , 2004, Neurochemistry International.

[32]  Salvatore Torquato,et al.  Effective conductivity of suspensions of hard spheres by Brownian motion simulation , 1991 .

[33]  Lucy Di-Silvio,et al.  Encyclopedia of Biomaterials and Biomedical Engineering. , 2004 .

[34]  S. Chung,et al.  Mechanisms of permeation and selectivity in calcium channels. , 2001, Biophysical journal.

[35]  R. Stoney,et al.  Gray's anatomy, 38th edition , 1997 .

[36]  Salvatore Torquato,et al.  EFFECTIVE CONDUCTIVITY, DIELECTRIC CONSTANT, AND DIFFUSION COEFFICIENT OF DIGITIZED COMPOSITE MEDIA VIA FIRST-PASSAGE-TIME EQUATIONS , 1999 .

[37]  P. Basser,et al.  A model for diffusion in white matter in the brain. , 2005, Biophysical journal.

[38]  F. H. Stillinger,et al.  Controlling the Short-Range Order and Packing Densities of Many-Particle Systems† , 2002 .

[39]  C. Nicholson,et al.  Extracellular space structure revealed by diffusion analysis , 1998, Trends in Neurosciences.

[40]  Salvatore Torquato,et al.  Effective conductivity of suspensions of overlapping spheres , 1992 .

[41]  S. Torquato,et al.  Determination of the effective conductivity of heterogeneous media by Brownian motion simulation , 1990 .

[42]  Salvatore Torquato,et al.  Effective mechanical and transport properties of cellular solids , 1998 .