Computational and experimental study on accuracy of off-axis reconstructions in optical diffraction tomography

Abstract. We present a study on spatial changes in the accuracy of tomographic reconstructions obtained with two of the most popular tomographic reconstruction algorithms for diffraction tomography—filtered backprojection (FBPJ) and Rytov-based filtered backpropagation (FBPP). We find out that not only FBPJ but also FBPP suffers from a significant loss of accuracy in the off-axis regions of a tomographic reconstruction and this effect is stronger for objects with a high refractive index contrast. Moreover, we propose some modifications to FBPP which allow for significant improvement of the off-axis performance of the algorithm. In the modified algorithm, called the extended depth of focus filtered backpropagation (EDOF-FBPP), scattered waves are backpropagated using a rigorous propagation algorithm, and then the Rytov approximation is applied on extended EDOF images. This modification (1) prevents violation of the Rytov validity condition due to the defocus of scattered waves and (2) suppresses unwrapping errors. The tomographic reconstruction algorithms FBPJ, FBPP, and EDOF-FBPP are extensively tested with numerical simulations supported with rigorous wave scattering methods. The experimental evaluation of the performance of the tomographic algorithms is provided with a tomographic measurement of an optical microtip located 21  μm from the central axis of the reconstruction.

[1]  J J Stamnes,et al.  Comparison of the filtered backpropagation and the filtered backprojection algorithms for quantitative tomography. , 1995, Applied optics.

[2]  Qiao Hu,et al.  Focus detection from digital in-line holograms based on spectral l1 norms. , 2007, Journal of the Optical Society of America. A, Optics, image science, and vision.

[3]  E. Cuche,et al.  Cell refractive index tomography by digital holographic microscopy. , 2006, Optics letters.

[4]  E. Wolf Determination of the Amplitude and the Phase of Scattered Fields by Holography , 1970 .

[5]  T. Kozacki,et al.  Computation of diffracted fields for the case of high numerical aperture using the angular spectrum method. , 2012, Applied optics.

[6]  E. Wolf Three-dimensional structure determination of semi-transparent objects from holographic data , 1969 .

[7]  T. Kozacki,et al.  Investigation of limitations of optical diffraction tomography , 2007 .

[8]  A. J. Devaney,et al.  Spectral representations for free space propagation of complex phase perturbations of optical fields , 1975 .

[9]  Jakob J. Stamnes,et al.  Comparison of phase retrieval methods for optical diffraction tomography , 1995 .

[10]  B. Chen,et al.  Validity of diffraction tomography based on the first born and the first rytov approximations. , 1998, Applied optics.

[11]  I. Yamaguchi,et al.  Phase-shifting digital holography. , 1997, Optics letters.

[12]  J. Kostencka,et al.  Noise suppressed optical diffraction tomography with autofocus correction. , 2014, Optics express.

[13]  Björn Kemper,et al.  Tomographic phase microscopy of living three-dimensional cell cultures , 2014, Journal of biomedical optics.

[14]  Kamran Badizadegan,et al.  Extended depth of focus in tomographic phase microscopy using a propagation algorithm. , 2008, Optics letters.

[15]  Tomasz Kozacki,et al.  High-precision topography measurement through accurate in-focus plane detection with hybrid digital holographic microscope and white light interferometer module. , 2014, Applied optics.

[16]  Patrik Langehanenberg,et al.  Autofocusing in digital holographic microscopy , 2011 .

[17]  R. Bachelot,et al.  Integration of micrometer-sized polymer elements at the end of optical fibers by free-radical photopolymerization. , 2001, Applied optics.

[18]  A. Devaney A Filtered Backpropagation Algorithm for Diffraction Tomography , 1982 .

[19]  C. Fang-Yen,et al.  Optical diffraction tomography for high resolution live cell imaging. , 2009, Optics express.

[20]  Colin J R Sheppard,et al.  Image formation in holographic tomography. , 2008, Optics letters.

[21]  A. J. Devaney,et al.  A Computer Simulation Study of Diffraction Tomography , 1983, IEEE Transactions on Biomedical Engineering.

[22]  W. Górski,et al.  Tomographic imaging of photonic crystal fibers. , 2007, Optics letters.

[23]  K. Brenner,et al.  Light propagation through microlenses: a new simulation method. , 1993, Applied optics.

[24]  T. Kreis Handbook of Holographic Interferometry: Optical and Digital Methods , 2004 .

[25]  I. Johansen,et al.  Quantitative results in ultrasonic tomography of large objects using line sources and curved detector arrays , 1991, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control.

[26]  Tomasz Kozacki,et al.  Autofocusing method for tilted image plane detection in digital holographic microscopy , 2013 .

[27]  Yun-Seong Jeon,et al.  Rotation error correction by numerical focus adjustment in tomographic phase microscopy , 2009 .