Stochastic modulation evidences a transitory EGF-Ras-ERK MAPK activity induced by PRMT5
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[1] S. Richard,et al. Loss of PRMT5 Promotes PDGFRα Degradation during Oligodendrocyte Differentiation and Myelination. , 2018, Developmental cell.
[2] Li-Jen Su,et al. Protein arginine methyltransferase 5 is a potential oncoprotein that upregulates G1 cyclins/cyclin‐dependent kinases and the phosphoinositide 3‐kinase/AKT signaling cascade , 2012, Cancer science.
[3] Alexander Hoffmann,et al. Understanding the temporal codes of intra-cellular signals. , 2010, Current opinion in genetics & development.
[4] D. Polsky,et al. Analysis of BRAF and N-RAS mutations in metastatic melanoma tissues. , 2003, Cancer research.
[5] William S. Hlavacek,et al. Relaxation oscillations and hierarchy of feedbacks in MAPK signaling , 2017, Scientific Reports.
[6] D. Gillespie. Exact Stochastic Simulation of Coupled Chemical Reactions , 1977 .
[7] G. Meister,et al. Methylation of Sm proteins by a complex containing PRMT5 and the putative U snRNP assembly factor pICln , 2001, Current Biology.
[8] Steven Clarke,et al. PRMT5 (Janus Kinase-binding Protein 1) Catalyzes the Formation of Symmetric Dimethylarginine Residues in Proteins* , 2001, The Journal of Biological Chemistry.
[9] Sharmistha Pal,et al. Human SWI/SNF-Associated PRMT5 Methylates Histone H3 Arginine 8 and Negatively Regulates Expression of ST7 and NM23 Tumor Suppressor Genes , 2004, Molecular and Cellular Biology.
[10] Philippe P Roux,et al. Activation and Function of the MAPKs and Their Substrates, the MAPK-Activated Protein Kinases , 2011, Microbiology and Molecular Reviews.
[11] Chang-Hai Tsai,et al. Crosstalk between Arg 1175 methylation and Tyr 1173 phosphorylation negatively modulates EGFR-mediated ERK activation , 2011, Nature Cell Biology.
[12] Xinbin Chen,et al. PRMT5 is required for cell-cycle progression and p53 tumor suppressor function , 2009, Nucleic acids research.
[13] Alma L. Burlingame,et al. A Raf-induced allosteric transition of KSR stimulates phosphorylation of MEK , 2011, Nature.
[14] Sharmistha Pal,et al. Protein Arginine Methyltransferase 5 Suppresses the Transcription of the RB Family of Tumor Suppressors in Leukemia and Lymphoma Cells , 2008, Molecular and Cellular Biology.
[15] J. Blenis,et al. ERK and p38 MAPK-Activated Protein Kinases: a Family of Protein Kinases with Diverse Biological Functions , 2004, Microbiology and Molecular Biology Reviews.
[16] Ulf Reimer,et al. Histone H2A and H4 N-terminal Tails Are Positioned by the MEP50 WD Repeat Protein for Efficient Methylation by the PRMT5 Arginine Methyltransferase* , 2015, The Journal of Biological Chemistry.
[17] Ximing J. Yang,et al. The expression and function of androgen receptor coactivator p44 and protein arginine methyltransferase 5 in the developing testis and testicular tumors. , 2007, The Journal of urology.
[18] U. Bhalla,et al. Emergent properties of networks of biological signaling pathways. , 1999, Science.
[19] D. Shechter,et al. A TGFβ-PRMT5-MEP50 Axis Regulates Cancer Cell Invasion through Histone H3 and H4 Arginine Methylation Coupled Transcriptional Activation and Repression , 2016, Oncogene.
[20] Walter Kolch,et al. When ubiquitination meets phosphorylation: a systems biology perspective of EGFR/MAPK signalling , 2013, Cell Communication and Signaling.
[21] I. Treilleux,et al. LKB1 regulates PRMT5 activity in breast cancer , 2018, International journal of cancer.
[22] K. Søreide,et al. EGFR and downstream genetic alterations in KRAS/BRAF and PI3K/AKT pathways in colorectal cancer: implications for targeted therapy. , 2012, Discovery medicine.
[23] Ming Zhou,et al. Regulation of Raf-1 by direct feedback phosphorylation. , 2005, Molecular cell.
[24] Ruth Nussinov,et al. Raf-1 Cysteine-Rich Domain Increases the Affinity of K-Ras/Raf at the Membrane, Promoting MAPK Signaling. , 2018, Structure.
[25] Kazuhiro Aoki,et al. Multiple Decisive Phosphorylation Sites for the Negative Feedback Regulation of SOS1 via ERK* , 2010, The Journal of Biological Chemistry.
[26] I. Lossos,et al. PRMT5-mediated histone arginine methylation antagonizes transcriptional repression by polycomb complex PRC2 , 2020, Nucleic acids research.
[27] Chi-Ying F. Huang,et al. Ultrasensitivity in the mitogen-activated protein kinase cascade. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[28] L. Rui,et al. PRMT5 in gene regulation and hematologic malignancies , 2019, Genes & diseases.
[29] B. Manwani,et al. Inhibition of mitogen-activated protein kinase phosphatase-1 (MKP-1) increases experimental stroke injury , 2014, Experimental Neurology.
[30] Yosef Yarden,et al. Feedback regulation of EGFR signalling: decision making by early and delayed loops , 2011, Nature Reviews Molecular Cell Biology.
[31] D. Hammer,et al. Integrin-mediated signalling through the MAP-kinase pathway. , 2008, IET systems biology.
[32] X. Cen,et al. Targeting protein arginine methyltransferase 5 inhibits colorectal cancer growth by decreasing arginine methylation of eIF4E and FGFR3 , 2015, Oncotarget.
[33] S. Clarke,et al. Protein arginine methylation in mammals: who, what, and why. , 2009, Molecular cell.
[34] R. Bernards,et al. RAF suppression synergizes with MEK inhibition in KRAS mutant cancer cells. , 2014, Cell reports.
[35] Tianhai Tian,et al. Plasma membrane nanoswitches generate high-fidelity Ras signal transduction , 2007, Nature Cell Biology.
[36] J. Grandis,et al. Signaling through the epidermal growth factor receptor during the development of malignancy. , 2004, Pharmacology & therapeutics.
[37] P. Crespo,et al. ERK Signals: Scaffolding Scaffolds? , 2016, Front. Cell Dev. Biol..
[38] M. Herlyn,et al. Nuclear cyclin D1/CDK4 kinase regulates CUL4 expression and triggers neoplastic growth via activation of the PRMT5 methyltransferase. , 2010, Cancer cell.
[39] Susan S. Taylor,et al. Kinases and Pseudokinases: Lessons from RAF , 2014, Molecular and Cellular Biology.
[40] D. Gillespie. A General Method for Numerically Simulating the Stochastic Time Evolution of Coupled Chemical Reactions , 1976 .
[41] Kwang-Hyun Cho,et al. Positive- and negative-feedback regulations coordinate the dynamic behavior of the Ras-Raf-MEK-ERK signal transduction pathway , 2009, Journal of Cell Science.
[42] Q. Fan,et al. The ubiquitin system: orchestrating cellular signals in non-small-cell lung cancer , 2020, Cellular & Molecular Biology Letters.
[43] Muffy Calder,et al. The Mammalian MAPK/ERK Pathway Exhibits Properties of a Negative Feedback Amplifier , 2010, Science Signaling.
[44] M. Tomita,et al. Conversion of graded phosphorylation into switch-like nuclear translocation via autoregulatory mechanisms in ERK signalling , 2016, Nature Communications.
[45] M. Baccarini,et al. Raf kinases in cancer–roles and therapeutic opportunities , 2011, Oncogene.
[46] Tyler E. Miller,et al. Methylation of histone H3 and H4 by PRMT5 regulates ribosomal RNA gene transcription , 2009, Journal of cellular biochemistry.
[47] Y. Zhong,et al. Role of protein arginine methyltransferase 5 in human cancers. , 2019, Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie.
[48] R. Bradshaw,et al. Early changes in protein synthesis induced by basic fibroblast growth factor, nerve growth factor, and epidermal growth factor in PC12 pheochromocytoma cells. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[49] J. Downward. Targeting RAS signalling pathways in cancer therapy , 2003, Nature Reviews Cancer.
[50] Min Liu,et al. PRMT5 suppresses DR4-mediated CCL20 release via NF-κB pathway , 2012 .
[51] K. Morgan,et al. Hierarchical scaffolding of an ERK1/2 activation pathway , 2013, Cell Communication and Signaling.
[52] Jeremiah D. Keyes,et al. Signaling diversity enabled by Rap1-regulated plasma membrane ERK with distinct temporal dynamics , 2019, bioRxiv.
[53] Rasika Mundade,et al. PRMT5, A Pivotal Player in Cancer , 2014 .
[54] H. Hang,et al. A role for the arginine methylation of Rad9 in checkpoint control and cellular sensitivity to DNA damage , 2011, Nucleic acids research.
[55] S. Clarke,et al. RNA and protein interactions modulated by protein arginine methylation. , 1998, Progress in Nucleic Acid Research and Molecular Biology.
[56] David B. Pettigrew,et al. Dynamic Properties of Regulatory Motifs Associated with Induction of Three Temporal Domains of Memory in Aplysia , 2005, Journal of Computational Neuroscience.
[57] S. Keyse,et al. Dual-specificity MAP kinase phosphatases (MKPs) , 2013, The FEBS journal.
[58] Daniel T Gillespie,et al. Stochastic simulation of chemical kinetics. , 2007, Annual review of physical chemistry.
[59] A. Mackensen,et al. Selective PRMT5 Inhibitors Suppress Human CD8+ T Cells by Upregulation of p53 and Impairment of the AKT Pathway Similar to the Tumor Metabolite MTA , 2019, Molecular Cancer Therapeutics.
[60] J. Hussain,et al. CRAF autophosphorylation of serine 621 is required to prevent its proteasome-mediated degradation. , 2008, Molecular cell.
[61] Ming Li,et al. The arginine methyltransferase PRMT5 and PRMT1 distinctly regulate the degradation of anti-apoptotic protein CFLARL in human lung cancer cells , 2019, Journal of Experimental & Clinical Cancer Research.
[62] Monika Heiner,et al. Rare Event Handling in Signalling Cascades , 2014 .
[63] Shinya Kuroda,et al. Prediction and validation of the distinct dynamics of transient and sustained ERK activation , 2005, Nature Cell Biology.
[64] K. Irie,et al. Dynamics and organization of MAP kinase signal pathways , 1995, Molecular reproduction and development.
[65] Mark T Bedford,et al. Arginine methylation an emerging regulator of protein function. , 2005, Molecular cell.
[66] S. Malek,et al. Targeting the MAPK Pathway in RAS Mutant Cancers. , 2018, Cold Spring Harbor perspectives in medicine.
[67] Yasushi Sako,et al. Optimality Conditions for Cell-Fate Heterogeneity That Maximize the Effects of Growth Factors in PC12 Cells , 2013, PLoS Comput. Biol..
[68] T. Shiomi,et al. Inhibition of MKP-1 expression potentiates JNK related apoptosis in renal cancer cells. , 2004, The Journal of urology.
[69] Sharmistha Pal,et al. Low levels of miR‐92b/96 induce PRMT5 translation and H3R8/H4R3 methylation in mantle cell lymphoma , 2007, The EMBO journal.
[70] S. Richard,et al. Arginine methylation regulates IL-2 gene expression: a role for protein arginine methyltransferase 5 (PRMT5). , 2005, The Biochemical journal.
[71] G. Lahav,et al. Encoding and Decoding Cellular Information through Signaling Dynamics , 2013, Cell.
[72] J. Hancock,et al. Activation of the MAPK module from different spatial locations generates distinct system outputs. , 2008, Molecular biology of the cell.
[73] Paola Lecca. Stochastic chemical kinetics , 2013, Biophysical Reviews.
[74] G. Bae,et al. PRMT5 promotes DNA repair through methylation of 53BP1 and is regulated by Src-mediated phosphorylation , 2020, Communications Biology.
[75] Channing J Der,et al. Increasing complexity of Ras signaling , 1998, Oncogene.
[76] Y. Pommier,et al. PRMT5-mediated arginine methylation of TDP1 for the repair of topoisomerase I covalent complexes , 2018, Nucleic acids research.
[77] Murat Cirit,et al. Systematic Quantification of Negative Feedback Mechanisms in the Extracellular Signal-regulated Kinase (erk) Signaling Network * □ S Experimental Procedures Data-driven Modeling of Feedback Regulating Erk Signaling Data-driven Modeling of Feedback Regulating Erk Signaling Data-driven Modeling of Fee , 2022 .
[78] Hong Zhang,et al. Arginine methylation modulates autophagic degradation of PGL granules in C. elegans. , 2013, Molecular cell.
[79] S. Keyse,et al. The regulation of oncogenic Ras/ERK signalling by dual-specificity mitogen activated protein kinase phosphatases (MKPs) , 2016, Seminars in cell & developmental biology.
[80] M. Cobb,et al. Mitogen-activated protein (MAP) kinase pathways: regulation and physiological functions. , 2001, Endocrine reviews.
[81] M. Jansson,et al. Arginine methylation regulates the p53 response , 2008, Nature Cell Biology.
[82] S. Nimer,et al. Arginine methyltransferases in normal and malignant hematopoiesis. , 2016, Experimental hematology.
[83] Soo-Hyun Park,et al. Activation of PRMT1 and PRMT5 mediates hypoxia- and ischemia-induced apoptosis in human lung epithelial cells and the lung of miniature pigs: the role of p38 and JNK mitogen-activated protein kinases. , 2013, Biochemical and biophysical research communications.
[84] Chonglin Yang,et al. Caenorhabditis elegans Protein Arginine Methyltransferase PRMT-5 Negatively Regulates DNA Damage-Induced Apoptosis , 2009, PLoS genetics.
[85] C. McArdle,et al. ERK phosphorylation and nuclear accumulation: insights from single-cell imaging. , 2012, Biochemical Society transactions.
[86] S. Wolf. The protein arginine methyltransferase family: an update about function, new perspectives and the physiological role in humans , 2009, Cellular and Molecular Life Sciences.
[87] P. Cohen,et al. Sustained activation of the mitogen-activated protein (MAP) kinase cascade may be required for differentiation of PC12 cells. Comparison of the effects of nerve growth factor and epidermal growth factor. , 1992, The Biochemical journal.
[88] Zhengxin Wang,et al. Protein Arginine Methyltransferase 5 Functions in Opposite Ways in the Cytoplasm and Nucleus of Prostate Cancer Cells , 2012, PloS one.
[89] N. Rosen,et al. V600E B-Raf requires the Hsp90 chaperone for stability and is degraded in response to Hsp90 inhibitors. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[90] Yu Zhao,et al. The Mechanism of Dephosphorylation of Extracellular Signal-regulated Kinase 2 by Mitogen-activated Protein Kinase Phosphatase 3* , 2001, The Journal of Biological Chemistry.
[91] Pamela A. Silver,et al. State of the Arg Protein Methylation at Arginine Comes of Age , 2001, Cell.
[92] Claudio Agostinelli,et al. Selective inhibition of protein arginine methyltransferase 5 blocks initiation and maintenance of B-cell transformation. , 2015, Blood.
[93] A. Deblasio,et al. JAK2V617F-mediated phosphorylation of PRMT5 downregulates its methyltransferase activity and promotes myeloproliferation. , 2011, Cancer cell.
[94] J. Luengo,et al. Discovery of Potent and Selective Covalent Protein Arginine Methyltransferase 5 (PRMT5) Inhibitors , 2019, ACS medicinal chemistry letters.
[95] E. Gilles,et al. Computational modeling of the dynamics of the MAP kinase cascade activated by surface and internalized EGF receptors , 2002, Nature Biotechnology.
[96] B. Kholodenko,et al. Negative feedback and ultrasensitivity can bring about oscillations in the mitogen-activated protein kinase cascades. , 2000, European journal of biochemistry.
[97] N. Ahn,et al. Signal transduction through MAP kinase cascades. , 1998, Advances in cancer research.
[98] B. Illi,et al. Myc and Omomyc functionally associate with the Protein Arginine Methyltransferase 5 (PRMT5) in glioblastoma cells , 2015, Scientific Reports.
[99] Lester G. Carter,et al. Correction: Structure of the Arginine Methyltransferase PRMT5-MEP50 Reveals a Mechanism for Substrate Specificity , 2013, PLoS ONE.
[100] Negative feedback self-regulation contributes to robust and high-fidelity transmembrane signal transduction , 2012, Journal of The Royal Society Interface.
[101] Kunio Kondoh,et al. The duration, magnitude and compartmentalization of ERK MAP kinase activity: mechanisms for providing signaling specificity , 2005, Journal of Cell Science.
[102] Z. Fuks,et al. Downregulation of KSR1 in pancreatic cancer xenografts by antisense oligonucleotides correlates with tumor drug uptake , 2008, Cancer biology & therapy.
[103] Jiaoti Huang,et al. PRMT5 Cooperates with pICln to Function as a Master Epigenetic Activator of DNA Double-Strand Break Repair Genes , 2019, iScience.
[104] D. Fell,et al. Differential feedback regulation of the MAPK cascade underlies the quantitative differences in EGF and NGF signalling in PC12 cells , 2000, FEBS letters.
[105] Walter Kolch,et al. Identification of the Mechanisms Regulating the Differential Activation of the MAPK Cascade by Epidermal Growth Factor and Nerve Growth Factor in PC12 Cells* , 2001, The Journal of Biological Chemistry.
[106] Z. Ronai,et al. PRMT5 function and targeting in cancer , 2020, Cell stress.
[107] M. Bedford,et al. Arginine methylation at a glance , 2007, Journal of Cell Science.
[108] Robert E. Lewis,et al. AMPK Promotes Aberrant PGC1β Expression To Support Human Colon Tumor Cell Survival , 2015, Molecular and Cellular Biology.
[109] M. Stallcup,et al. Minireview: protein arginine methylation of nonhistone proteins in transcriptional regulation. , 2009, Molecular endocrinology.
[110] G. Merlino,et al. Protein Arginine Methyltransferase 5 Regulates ERK1/2 Signal Transduction Amplitude and Cell Fate Through CRAF , 2011, Science Signaling.
[111] A. Richters. Targeting protein arginine methyltransferase 5 in disease. , 2017, Future medicinal chemistry.
[112] Y. Ke,et al. Ginkgolides mimic the effects of hypoxic preconditioning to protect C6 cells against ischemic injury by up-regulation of hypoxia-inducible factor-1 alpha and erythropoietin. , 2008, The international journal of biochemistry & cell biology.
[113] S. Wiese,et al. B- and C-RAF Display Essential Differences in Their Binding to Ras , 2007, Journal of Biological Chemistry.
[114] W. Shih,et al. Detection of B-RAF and N-RAS mutations in human melanoma. , 2005, Journal of the American College of Surgeons.