Epigenetics of beta-globin gene regulation.
暂无分享,去创建一个
Ann Dean | Chunhui Hou | A. Dean | J. Little | Jane A Little | C. Kiefer | Christine M Kiefer | Chunhui Hou
[1] J. D. Engel,et al. Human β-Globin Locus Control Region HS5Contains CTCF- and Developmental Stage-Dependent Enhancer-BlockingActivity in ErythroidCells , 2003, Molecular and Cellular Biology.
[2] Wouter de Laat,et al. The β-globin nuclear compartment in development and erythroid differentiation , 2003, Nature Genetics.
[3] A. Schechter,et al. 5-Azacytidine increases gamma-globin synthesis and reduces the proportion of dense cells in patients with sickle cell anemia. , 1983, Blood.
[4] G. Felsenfeld,et al. An insulator element and condensed chromatin region separate the chicken β‐globin locus from an independently regulated erythroid‐specific folate receptor gene , 1999, The EMBO journal.
[5] Kirby D. Johnson,et al. Chromatin domain activation via GATA-1 utilization of a small subset of dispersed GATA motifs within a broad chromosomal region. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[6] Kirby D. Johnson,et al. Hematopoietic-specific activators establish an overlapping pattern of histone acetylation and methylation within a mammalian chromatin domain , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[7] R. Flavell,et al. DNA methylation in the human γδβ-globin locus in erythroid and nonerythroid tissues , 1980, Cell.
[8] A. Dean. On a chromosome far, far away: LCRs and gene expression. , 2006, Trends in genetics : TIG.
[9] A. West,et al. Recruitment of histone modifications by USF proteins at a vertebrate barrier element. , 2004, Molecular cell.
[10] David I. K. Martin,et al. CpG Hypomethylation in a Large Domain Encompassing the Embryonic β-Like Globin Genes in Primitive Erythrocytes , 2007, Molecular and Cellular Biology.
[11] P. Fraser,et al. Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus. , 2000, Molecular cell.
[12] N. Galjart,et al. CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus. , 2007, Genes & development.
[13] D. Lavelle,et al. Effect of 5-aza-2′-deoxycytidine (Dacogen) on covalent histone modifications of chromatin associated with the ɛ-, γ-, and β-globin promoters in Papio anubis , 2006 .
[14] G. Felsenfeld,et al. A large upstream region is not necessary for gene expression or hypersensitive site formation at the mouse beta -globin locus. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[15] M. Groudine,et al. Looping versus linking: toward a model for long-distance gene activation. , 1999, Genes & development.
[16] Chun Li Zhang,et al. Class II Histone Deacetylases Act as Signal-Responsive Repressors of Cardiac Hypertrophy , 2002, Cell.
[17] G. Felsenfeld,et al. USF1 Recruits Histone Modification Complexes and Is Critical for Maintenance of a Chromatin Barrier , 2007, Molecular and Cellular Biology.
[18] Kirby D. Johnson,et al. Distinct mechanisms control RNA polymerase II recruitment to a tissue-specific locus control region and a downstream promoter. , 2001, Molecular cell.
[19] A. West,et al. Conserved CTCF Insulator Elements Flank the Mouse and Human β-Globin Loci , 2002, Molecular and Cellular Biology.
[20] Jessica Halow,et al. The beta -globin locus control region (LCR) functions primarily by enhancing the transition from transcription initiation to elongation. , 2003, Genes & development.
[21] D. Lavelle,et al. Maintenance of elevated fetal hemoglobin levels by decitabine during dose interval treatment of sickle cell anemia. , 2002, Blood.
[22] A. Schechter,et al. 5-Azacytidine increases gamma-globin synthesis and reduces the proportion of dense cells in patients with sickle cell anemia , 1983 .
[23] D. Weatherall. The global problem of genetic disease , 2005, Annals of human biology.
[24] T. Kouzarides. Chromatin Modifications and Their Function , 2007, Cell.
[25] G. Blobel,et al. Histone H3 lysine 9 methylation and HP1gamma are associated with transcription elongation through mammalian chromatin. , 2005, Molecular cell.
[26] C. Allis,et al. The language of covalent histone modifications , 2000, Nature.
[27] G. Stamatoyannopoulos,et al. Butyrate increases the efficiency of translation of gamma-globin mRNA. , 2005, Blood.
[28] R. Singal,et al. Methylation of Promoter Proximal-transcribed Sequences of an Embryonic Globin Gene Inhibits Transcription in Primary Erythroid Cells and Promotes Formation of a Cell Type-specific Methyl Cytosine Binding Complex* , 2002, The Journal of Biological Chemistry.
[29] G. Stamatoyannopoulos,et al. Butyrate increases the efficiency of translation of γ-globin mRNA , 2005 .
[30] Erik Splinter,et al. Looping and interaction between hypersensitive sites in the active beta-globin locus. , 2002, Molecular cell.
[31] Ann Dean,et al. Distinctive Signatures of Histone Methylation in Transcribed Coding and Noncoding Human β-Globin Sequences , 2006, Molecular and Cellular Biology.
[32] Michael Litt,et al. The insulation of genes from external enhancers and silencing chromatin , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[33] S. Fiering,et al. Developmental- and differentiation-specific patterns of human γ- and β-globin promoter DNA methylation , 2007 .
[34] G. Blobel,et al. Formation of a Tissue-Specific Histone Acetylation Pattern by the Hematopoietic Transcription Factor GATA-1 , 2003, Molecular and Cellular Biology.
[35] R. Flavell,et al. DNA methylation in the human gamma delta beta-globin locus in erythroid and nonerythroid tissues. , 1980, Cell.
[36] S. Fiering,et al. Developmental- and differentiation-specific patterns of human gamma- and beta-globin promoter DNA methylation. , 2007, Blood.
[37] P. Kingsley,et al. "Maturational" globin switching in primary primitive erythroid cells. , 2005, Blood.
[38] D. Zwiers,et al. 5-Azacytidine stimulates fetal hemoglobin synthesis in anemic baboons. , 1982, Proceedings of the National Academy of Sciences of the United States of America.
[39] D. Tuan,et al. HS2 Enhancer Function Is Blocked by a Transcriptional Terminator Inserted between the Enhancer and the Promoter*[boxs] , 2004, Journal of Biological Chemistry.
[40] M. Groudine,et al. Conservation of sequence and structure flanking the mouse and human β-globin loci: The β-globin genes are embedded within an array of odorant receptor genes , 1999 .
[41] R. Singal,et al. Methylation of the minimal promoter of an embryonic globin gene silences transcription in primary erythroid cells. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[42] G. Stamatoyannopoulos,et al. The molecular basis of blood diseases , 1987 .
[43] N. Dillon,et al. Functional gene expression domains: defining the functional unit of eukaryotic gene regulation. , 2000, BioEssays : news and reviews in molecular, cellular and developmental biology.
[44] A. West,et al. Structural and functional conservation at the boundaries of the chicken β‐globin domain , 2000 .
[45] A. West,et al. Structural and functional conservation at the boundaries of the chicken beta-globin domain. , 2000, The EMBO journal.
[46] H. Ashe,et al. Intergenic transcription and transinduction of the human beta-globin locus. , 1997, Genes & development.
[47] K. Robertson. DNA methylation and human disease , 2005, Nature Reviews Genetics.
[48] S. Berger. The complex language of chromatin regulation during transcription , 2007, Nature.
[49] O. Mian,et al. The role of the epigenetic signal, DNA methylation, in gene regulation during erythroid development. , 2008, Current topics in developmental biology.
[50] M. Groudine,et al. A Complex Chromatin Landscape Revealed by Patterns of Nuclease Sensitivity and Histone Modification within the Mouse β-Globin Locus , 2003, Molecular and Cellular Biology.
[51] M. Reitman,et al. Developmental regulation of topoisomerase II sites and DNase I-hypersensitive sites in the chicken beta-globin locus. , 1990, Molecular and cellular biology.
[52] G. Felsenfeld,et al. Characterization of the chicken beta-globin insulator. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[53] G. Felsenfeld,et al. Loss of transcriptional activity of a transgene is accompanied by DNA methylation and histone deacetylation and is prevented by insulators. , 1998, Genes & development.
[54] O. Witt,et al. Induction of fetal hemoglobin expression by the histone deacetylase inhibitor apicidin. , 2003, Blood.
[55] R. Hoffman,et al. Effects of 5-aza-2'-deoxycytidine on fetal hemoglobin levels, red cell adhesion, and hematopoietic differentiation in patients with sickle cell disease. , 2003, Blood.
[56] D. Amanatullah,et al. PU.1 inhibits the erythroid program by binding to GATA‐1 on DNA and creating a repressive chromatin structure , 2005, The EMBO journal.
[57] T. Jenuwein,et al. An epigenetic road map for histone lysine methylation , 2003, Journal of Cell Science.
[58] Christopher R. Vakoc,et al. Profile of Histone Lysine Methylation across Transcribed Mammalian Chromatin , 2006, Molecular and Cellular Biology.
[59] M. Reitman,et al. Mutational analysis of the chicken beta-globin enhancer reveals two positive-acting domains. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[60] A. West,et al. The Protein CTCF Is Required for the Enhancer Blocking Activity of Vertebrate Insulators , 1999, Cell.
[61] G. Stamatoyannopoulos,et al. Histone acetylation at the human β-globin locus changes with developmental age , 2004 .
[62] W. C. Forrester,et al. A deletion of the human beta-globin locus activation region causes a major alteration in chromatin structure and replication across the entire beta-globin locus. , 1990, Genes & development.
[63] E. Bresnick,et al. Developmentally dynamic histone acetylation pattern of a tissue-specific chromatin domain. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[64] C. Lowrey,et al. Neither DNA hypomethylation nor changes in the kinetics of erythroid differentiation explain 5-azacytidine's ability to induce human fetal hemoglobin. , 2007, Blood.
[65] Wouter de Laat,et al. CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus. , 2006, Genes & development.
[66] Ruedi Aebersold,et al. Activator-mediated recruitment of the MLL2 methyltransferase complex to the beta-globin locus. , 2007, Molecular cell.
[67] G. Felsenfeld,et al. Transitions in histone acetylation reveal boundaries of three separately regulated neighboring loci , 2001, The EMBO journal.
[68] S. Orkin,et al. Erythroid-cell-specific properties of transcription factor GATA-1 revealed by phenotypic rescue of a gene-targeted cell line , 1997, Molecular and cellular biology.
[69] M. Groudine,et al. Description and Targeted Deletion of 5′ Hypersensitive Site 5 and 6 of the Mouse β-Globin Locus Control Region , 1998 .
[70] Cameron S. Osborne,et al. Intergenic Transcription, Cell-Cycle and the Developmentally Regulated Epigenetic Profile of the Human Beta-Globin Locus , 2007, PloS one.
[71] M. Groudine,et al. Flanking HS-62.5 and 3' HS1, and regions upstream of the LCR, are not required for beta-globin transcription. , 2006, Blood.
[72] F. Grosveld,et al. Developmental stage-specific epigenetic control of human beta-globin gene expression is potentiated in hematopoietic progenitor cells prior to their transcriptional activation. , 2003, Blood.
[73] G. Jiménez,et al. Activation of the beta-globin locus control region precedes commitment to the erythroid lineage. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[74] M. Brand,et al. Nucleosome and transcription activator antagonism at human β-globin locus control region DNase I hypersensitive sites , 2007, Nucleic acids research.
[75] F. Grosveld,et al. Mechanisms of developmental control of transcription in the murine alpha- and beta-globin loci. , 1999, Genes & development.
[76] D. Faller,et al. Short-chain fatty acids induce gamma-globin gene expression by displacement of a HDAC3-NCoR repressor complex. , 2006, Blood.
[77] Félix Recillas-Targa,et al. Position-effect protection and enhancer blocking by the chicken β-globin insulator are separable activities , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[78] R. Hoffman,et al. 2-deoxy 5-azacytidine and fetal hemoglobin induction in sickle cell anemia. , 2000, Blood.
[79] D. Lavelle,et al. Effect of 5-aza-2'-deoxycytidine (Dacogen) on covalent histone modifications of chromatin associated with the epsilon-, gamma-, and beta-globin promoters in Papio anubis. , 2006, Experimental hematology.
[80] G. Kollias,et al. Position-independent, high-level expression of the human β-globin gene in transgenic mice , 1987, Cell.
[81] G. Felsenfeld,et al. Bidirectional control of the chicken beta- and epsilon-globin genes by a shared enhancer. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[82] G. Felsenfeld,et al. We gather together: insulators and genome organization. , 2007, Current opinion in genetics & development.
[83] De-Pei Liu,et al. Mechanisms of human gamma-globin transcriptional induction by apicidin involves p38 signaling to chromatin. , 2007, Biochemical and biophysical research communications.
[84] G. Atweh,et al. Induction of fetal hemoglobin in the treatment of sickle cell disease. , 2006, Hematology. American Society of Hematology. Education Program.
[85] A. Riggs,et al. Carcinogenicity and haemoglobin synthesis induction by cytidine analogues. , 1988, British Journal of Cancer.
[86] C. Allis,et al. Correlation Between Histone Lysine Methylation and Developmental Changes at the Chicken β-Globin Locus , 2001, Science.
[87] M. Groudine,et al. β-globin Gene Switching and DNase I Sensitivity of the Endogenous β-globin Locus in Mice Do Not Require the Locus Control Region , 2000 .
[88] M. Sutton,et al. Role of epigenetic modifications in normal globin gene regulation and butyrate-mediated induction of fetal hemoglobin. , 2007, Blood.
[89] A. Wolffe,et al. The barrier function of an insulator couples high histone acetylation levels with specific protection of promoter DNA from methylation. , 2002, Genes & development.
[90] Cameron S. Osborne,et al. Long-range chromatin regulatory interactions in vivo , 2002, Nature Genetics.
[91] T. R. Hebbes,et al. Core histone hyperacetylation co‐maps with generalized DNase I sensitivity in the chicken beta‐globin chromosomal domain. , 1994, The EMBO journal.
[92] G. Stamatoyannopoulos. Control of globin gene expression during development and erythroid differentiation. , 2005, Experimental hematology.
[93] G. Blobel,et al. Dissecting Molecular Steps in Chromatin Domain Activation during Hematopoietic Differentiation , 2007, Molecular and Cellular Biology.
[94] G. Felsenfeld,et al. Methylation of histone H4 by arginine methyltransferase PRMT1 is essential in vivo for many subsequent histone modifications. , 2005, Genes & development.
[95] François Fuks,et al. DNA methylation and histone modifications: teaming up to silence genes. , 2005, Current opinion in genetics & development.
[96] A. Dean,et al. An insulator blocks spreading of histone acetylation and interferes with RNA polymerase II transfer between an enhancer and gene. , 2004, Nucleic acids research.
[97] Arthur W. Nienhuis,et al. Hemoglobin switching , 1978, Cell.
[98] G. Atweh,et al. Epigenetic analysis of the human alpha- and beta-globin gene clusters. , 2008, Blood cells, molecules & diseases.
[99] M. Groudine,et al. The Locus Control Region Is Necessary for Gene Expression in the Human β-Globin Locus but Not the Maintenance of an Open Chromatin Structure in Erythroid Cells , 1998, Molecular and Cellular Biology.
[100] G. Stamatoyannopoulos,et al. Sustained induction of fetal hemoglobin by pulse butyrate therapy in sickle cell disease. , 1999, Blood.
[101] J. D. Engel,et al. Fine Tuning of Globin Gene Expression by DNA Methylation , 2006, PloS one.
[102] Y. Kan,et al. Germ-line transmission and developmental regulation of a 150-kb yeast artificial chromosome containing the human beta-globin locus in transgenic mice. , 1993, Proceedings of the National Academy of Sciences of the United States of America.