Biodiversity of endolithic fungi in coral skeletons and other reef substrates revealed with 18S rDNA metabarcoding
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H. Verbruggen | A. Góes-Neto | F. Badotti | V. Marcelino | Felipe Ferreira da Silva | Heroen Verbruggen
[1] Vanessa R. Marcelino,et al. CCMetagen: comprehensive and accurate identification of eukaryotes and prokaryotes in metagenomic data , 2019, Genome Biology.
[2] S. Van den Wyngaert,et al. Fungi in aquatic ecosystems , 2019, Nature Reviews Microbiology.
[3] Ole Lund,et al. Rapid and precise alignment of raw reads against redundant databases with KMA , 2018, BMC Bioinformatics.
[4] J. Fourqurean,et al. Inter-domain microbial diversity within the coral holobiont Siderastrea siderea from two depth habitats , 2018, PeerJ.
[5] K. Pang,et al. Phylogenetic survey and antimicrobial activity of cultivable fungi associated with five scleractinian coral species in the South China Sea , 2018 .
[6] H. Verbruggen,et al. Highly structured prokaryote communities exist within the skeleton of coral colonies , 2017, The ISME Journal.
[7] J. Gong,et al. Distinct seasonality of chytrid-dominated benthic fungal communities in the neritic oceans (Bohai Sea and North Yellow Sea) , 2017 .
[8] T. Ainsworth,et al. The Other Microeukaryotes of the Coral Reef Microbiome. , 2017, Trends in microbiology.
[9] Robert Lücking,et al. Fungal Diversity Revisited: 2.2 to 3.8 Million Species , 2017, Microbiology spectrum.
[10] G. Gadd,et al. The roles of endolithic fungi in bioerosion and disease in marine ecosystems. II. Potential facultatively parasitic anamorphic ascomycetes can cause disease in corals and molluscs , 2017, Mycology.
[11] S. Raghukumar. Fungi in Coastal and Oceanic Marine Ecosystems , 2017 .
[12] P. Glynn,et al. Coral Reefs of the Eastern Tropical Pacific: Persistence and Loss in a Dynamic Environment , 2017 .
[13] A. Correa,et al. Diversity, Distribution and Stability of Symbiodinium in Reef Corals of the Eastern Tropical Pacific , 2017 .
[14] A. Machordom,et al. Aspergillus sydowii and Other Potential Fungal Pathogens in Gorgonian Octocorals of the Ecuadorian Pacific , 2016, PloS one.
[15] Ben Nichols,et al. VSEARCH: a versatile open source tool for metagenomics , 2016, PeerJ.
[16] H. Verbruggen,et al. Multi-marker metabarcoding of coral skeletons reveals a rich microbiome and diverse evolutionary origins of endolithic algae , 2016, Scientific Reports.
[17] R. Gates,et al. Corals' microbial sentinels , 2016, Science.
[18] S. Egan,et al. Microbial Dysbiosis: Rethinking Disease in Marine Ecosystems , 2016, Front. Microbiol..
[19] H. Grossart,et al. Aquatic fungi: targeting the forgotten in microbial ecology. , 2016, Current opinion in microbiology.
[20] Scott T. Bates,et al. FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild , 2016 .
[21] S. Suetrong,et al. Classification of marine Ascomycota, Basidiomycota, Blastocladiomycota and Chytridiomycota , 2015, Fungal Diversity.
[22] E. Peters. Diseases of Coral Reef Organisms , 2015 .
[23] A. Amend. From Dandruff to Deep-Sea Vents: Malassezia-like Fungi Are Ecologically Hyper-diverse , 2014, PLoS pathogens.
[24] O. Yarden. Fungal association with sessile marine invertebrates , 2014, Front. Microbiol..
[25] R. Gates,et al. The endosymbiotic dinoflagellates (Symbiodinium sp.) of corals are parasites and mutualists , 2013, Coral Reefs.
[26] E. Jones,et al. Marine Fungi: and Fungal-like Organisms , 2012 .
[27] T. Oliver,et al. Coral-associated marine fungi form novel lineages and heterogeneous assemblages , 2011, The ISME Journal.
[28] Guy Leonard,et al. Marine fungi: their ecology and molecular diversity. , 2012, Annual review of marine science.
[29] M. Hantschke,et al. The Malassezia Genus in Skin and Systemic Diseases , 2012, Clinical Microbiology Reviews.
[30] C. Raghukumar,et al. Fungi and their role in corals and coral reef ecosystems. , 2012, Progress in molecular and subcellular biology.
[31] B. Willis,et al. Metagenomic analysis of the coral holobiont during a natural bleaching event on the Great Barrier Reef. , 2011, Environmental microbiology reports.
[32] D. Simmons,et al. Phylogeny of Powellomycetaceae fam. nov. and description of Geranomyces variabilis gen. et comb. nov. , 2011, Mycologia.
[33] Rob Knight,et al. UCHIME improves sensitivity and speed of chimera detection , 2011, Bioinform..
[34] Ning Ma,et al. BLAST+: architecture and applications , 2009, BMC Bioinformatics.
[35] Abraham E. Tucker,et al. Evaluating high‐throughput sequencing as a method for metagenomic analysis of nematode diversity , 2009, Molecular ecology resources.
[36] Florent E. Angly,et al. Metagenomic analysis of stressed coral holobionts. , 2009, Environmental microbiology.
[37] P. Bayman,et al. Fungi in healthy and diseased sea fans (Gorgonia ventalina): is Aspergillus sydowii always the pathogen? , 2008, Coral Reefs.
[38] R. Steneck,et al. Coral Reefs Under Rapid Climate Change and Ocean Acidification , 2007, Science.
[39] Forest Rohwer,et al. Metagenomic analysis of the microbial community associated with the coral Porites astreoides. , 2007, Environmental microbiology.
[40] M. Gullino,et al. First Report of Ophiosphaerella korrae Causing Spring Dead Spot of Bermudagrass in Italy. , 2007, Plant Disease.
[41] B. Willis,et al. Coral disease, environmental drivers, and the balance between coral and microbial associates , 2007 .
[42] D. Hibbett,et al. Evolutionary relationships of Mycaureola dilseae (Agaricales), a basidiomycete pathogen of a subtidal rhodophyte. , 2006, American journal of botany.
[43] S. Golubić,et al. Endolithic fungi in marine ecosystems. , 2005, Trends in microbiology.
[44] K. Kim,et al. Characterization of Aspergillus sydowii (Thom et Church), a fungal pathogen of Caribbean sea fan corals , 2001, Hydrobiologia.
[45] N. Knowlton,et al. Multispecies Microbial Mutualisms on Coral Reefs: The Host as a Habitat , 2003, The American Naturalist.
[46] N. Knowlton,et al. Diversity and distribution of coral-associated bacteria , 2002 .
[47] C. Raghukumar,et al. Fungi in Porites lutea: association with healthy and diseased corals. , 2001, Diseases of aquatic organisms.
[48] C. Payri,et al. Bioerosion of the coralline alga Hydrolithon onkodes by microborers in the coral reefs of Moorea, Fr , 2001 .
[49] J. Spatafora,et al. Lulworthiales, a new order of marine Ascomycota. , 2000 .
[50] L. Kaufman,et al. Endolithic fungi in reef-building corals (Order : Scleractinia) are common, cosmopolitan, and potentially pathogenic. , 2000, The Biological bulletin.
[51] S. Golubić,et al. Fungi in corals: black bands and density-banding of Porites lutea and P. lobata skeleton , 2000 .
[52] T. W. Johnson,et al. Marine Mycology: The Higher Fungi , 1980 .
[53] J. Kohlmeyer. The Role of Marine Fungi in the Penetration of Calcareous Substances , 1969 .
[54] G. R. Bisby,et al. A Dictionary of the Fungi , 1943, Nature.