Cellulosomes: highly efficient nanomachines designed to deconstruct plant cell wall complex carbohydrates.
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[1] Raphael Lamed,et al. ScaC, an Adaptor Protein Carrying a Novel Cohesin That Expands the Dockerin-Binding Repertoire of the Ruminococcus flavefaciens 17 Cellulosome , 2004, Journal of bacteriology.
[2] P. Gounon,et al. OlpB, a new outer layer protein of Clostridium thermocellum, and binding of its S-layer-like domains to components of the cell envelope , 1995, Journal of bacteriology.
[3] D. Bolam,et al. Carbohydrate-binding modules: fine-tuning polysaccharide recognition. , 2004, The Biochemical journal.
[4] A. Kosugi,et al. Cell-Surface-Anchoring Role of N-Terminal Surface Layer Homology Domains of Clostridium cellulovorans EngE , 2002, Journal of bacteriology.
[5] E Setter,et al. Characterization of a cellulose-binding, cellulase-containing complex in Clostridium thermocellum , 1983, Journal of bacteriology.
[6] L. Ljungdahl,et al. The Cellulase/Hemicellulase System of the Anaerobic FungusOrpinomycesPC‐2 and Aspects of Its Applied Use , 2008, Annals of the New York Academy of Sciences.
[7] E. Bayer,et al. The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides. , 1999, Trends in microbiology.
[8] O. Grépinet,et al. Nucleotide sequence and deletion analysis of the xylanase gene (xynZ) of Clostridium thermocellum , 1988, Journal of bacteriology.
[9] P. Karplus,et al. Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca , 1997, Nature Structural Biology.
[10] E. Bayer,et al. Multiple display of catalytic modules on a protein scaffold: nano-fabrication of enzyme particles. , 2007, Journal of biotechnology.
[11] Deborah Goffner,et al. Lignins and lignocellulosics: a better control of synthesis for new and improved uses. , 2003, Trends in plant science.
[12] B. Henrissat,et al. Structures and mechanisms of glycosyl hydrolases. , 1995, Structure.
[13] E. Bayer,et al. Species‐specificity of the cohesin‐dockerin interaction between Clostridium thermocellum and Clostridium cellulolyticum: Prediction of specificity determinants of the dockerin domain , 1997, Proteins.
[14] R. Haser,et al. Structures of mutants of cellulase Cel48F of Clostridium cellulolyticum in complex with long hemithiocellooligosaccharides give rise to a new view of the substrate pathway during processive action. , 2008, Journal of molecular biology.
[15] E. Bayer,et al. Cohesin‐dockerin microarray: Diverse specificities between two complementary families of interacting protein modules , 2008, Proteomics.
[16] A. Kosugi,et al. Hydrophilic Domains of Scaffolding Protein CbpA Promote Glycosyl Hydrolase Activity and Localization of Cellulosomes to the Cell Surface of Clostridium cellulovorans , 2004, Journal of bacteriology.
[17] R. Warren. Microbial hydrolysis of polysaccharides. , 1996, Annual review of microbiology.
[18] S. Firbank,et al. Evidence that family 35 carbohydrate binding modules display conserved specificity but divergent function , 2009, Proceedings of the National Academy of Sciences.
[19] Lee R Lynd,et al. Enzyme–microbe synergy during cellulose hydrolysis by Clostridium thermocellum , 2006, Proceedings of the National Academy of Sciences.
[20] H. Fierobe,et al. The cellulosomes from Clostridium cellulolyticum , 2009, The FEBS journal.
[21] T. Steitz,et al. Crystal structure of a bacterial family‐III cellulose‐binding domain: a general mechanism for attachment to cellulose. , 1996, The EMBO journal.
[22] B. Henrissat,et al. Imaging the Enzymatic Digestion of Bacterial Cellulose Ribbons Reveals the Endo Character of the Cellobiohydrolase Cel6A from Humicola insolens and Its Mode of Synergy with Cellobiohydrolase Cel7A , 2000, Applied and Environmental Microbiology.
[23] N. Gilkes,et al. Cellulose hydrolysis by bacteria and fungi. , 1995, Advances in microbial physiology.
[24] E. Bayer,et al. CelI, a Noncellulosomal Family 9 Enzyme from Clostridium thermocellum, Is a Processive Endoglucanase That Degrades Crystalline Cellulose , 2003, Journal of bacteriology.
[25] P. Béguin,et al. The cellulosome: an exocellular, multiprotein complex specialized in cellulose degradation. , 1996, Critical reviews in biochemistry and molecular biology.
[26] Harry J. Gilbert,et al. Cellulosome assembly revealed by the crystal structure of the cohesin–dockerin complex , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[27] Raphael Lamed,et al. A Novel Acetivibrio cellulolyticus Anchoring Scaffoldin That Bears Divergent Cohesins , 2004, Journal of bacteriology.
[28] E. Bayer,et al. Expression, purification and subunit‐binding properties of cohesins 2 and 3 of the Clostridium thermocellum cellulosome , 1995, FEBS letters.
[29] E. Bayer,et al. Noncellulosomal cohesin- and dockerin-like modules in the three domains of life. , 2009, FEMS microbiology letters.
[30] D. Bolam,et al. The Family 11 Carbohydrate-binding Module of Clostridium thermocellum Lic26A-Cel5E Accommodates β-1,4- and β-1,3–1,4-Mixed Linked Glucans at a Single Binding Site* , 2004, Journal of Biological Chemistry.
[31] E. Bayer,et al. Design and Production of Active Cellulosome Chimeras , 2001, The Journal of Biological Chemistry.
[32] Michael J. Shulman,et al. Physical association of the catalytic and helper modules of a family‐9 glycoside hydrolase is essential for activity , 2009, FEBS letters.
[33] E. Bayer,et al. Structural basis of Clostridium perfringens toxin complex formation , 2008, Proceedings of the National Academy of Sciences.
[34] M. Hammel,et al. Structural Insights into the Mechanism of Formation of Cellulosomes Probed by Small Angle X-ray Scattering* , 2004, Journal of Biological Chemistry.
[35] J. Hall,et al. The non-catalytic C-terminal region of endoglucanase E from Clostridium thermocellum contains a cellulose-binding domain. , 1991, The Biochemical journal.
[36] J. Aubert,et al. Organization of a Clostridium thermocellum gene cluster encoding the cellulosomal scaffolding protein CipA and a protein possibly involved in attachment of the cellulosome to the cell surface , 1993, Journal of bacteriology.
[37] Raphael Lamed,et al. Ruminococcus albus 8 Mutants Defective in Cellulose Degradation Are Deficient in Two Processive Endocellulases, Cel48A and Cel9B, Both of Which Possess a Novel Modular Architecture , 2004, Journal of bacteriology.
[38] H. Gilbert,et al. Cellulosomes: microbial nanomachines that display plasticity in quaternary structure , 2007, Molecular microbiology.
[39] P. Simpson,et al. Solution structure of the CBM10 cellulose binding module from Pseudomonas xylanase A. , 2000, Biochemistry.
[40] W. M. Westler,et al. Solution structure of a type I dockerin domain, a novel prokaryotic, extracellular calcium-binding domain. , 2001, Journal of molecular biology.
[41] A. Kosugi,et al. Xylanase and Acetyl Xylan Esterase Activities of XynA, a Key Subunit of the Clostridium cellulovorans Cellulosome for Xylan Degradation , 2002, Applied and Environmental Microbiology.
[42] G. Xue,et al. Intronless celB from the anaerobic fungus Neocallimastix patriciarum encodes a modular family A endoglucanase. , 1994, The Biochemical journal.
[43] B. Henrissat,et al. A Bifunctionalized Fluorogenic Tetrasaccharide as a Substrate to Study Cellulases* , 1997, The Journal of Biological Chemistry.
[44] Raphael Lamed,et al. The Cellulosome System of Acetivibrio cellulolyticus Includes a Novel Type of Adaptor Protein and a Cell Surface Anchoring Protein , 2003, Journal of bacteriology.
[45] R. Haser,et al. The crystal structure of the processive endocellulase CelF of Clostridium cellulolyticum in complex with a thiooligosaccharide inhibitor at 2.0 Å resolution , 1998, The EMBO journal.
[46] Pedro M Alzari,et al. Duplicated dockerin subdomains of Clostridium thermocellum endoglucanase CelD bind to a cohesin domain of the scaffolding protein CipA with distinct thermodynamic parameters and a negative cooperativity. , 2002, Biochemistry.
[47] E. Bayer,et al. Cellulosome: a discrete cell surface organelle of Clostridium thermocellum which exhibits separate antigenic, cellulose-binding and various cellulolytic activities , 1983 .
[48] P Béguin,et al. A new type of cohesin domain that specifically binds the dockerin domain of the Clostridium thermocellum cellulosome-integrating protein CipA , 1996, Journal of bacteriology.
[49] Raphael Lamed,et al. A Novel Cell Surface-Anchored Cellulose-Binding Protein Encoded by the sca Gene Cluster of Ruminococcus flavefaciens , 2007, Journal of bacteriology.
[50] E. Bayer,et al. Action of Designer Cellulosomes on Homogeneous Versus Complex Substrates , 2005, Journal of Biological Chemistry.
[51] J. Aubert,et al. Recognition specificity of the duplicated segments present in Clostridium thermocellum endoglucanase CelD and in the cellulosome-integrating protein CipA , 1994, Journal of bacteriology.
[52] H. Gilbert,et al. Synergistic interaction of the cellulosome integrating protein (CipA) from Clostridium thermocellum with a cellulosomal endoglucanase , 1998, FEBS letters.
[53] E. Bayer,et al. Cell Surface Enzyme Attachment Is Mediated by Family 37 Carbohydrate-Binding Modules, Unique to Ruminococcus albus , 2008, Journal of bacteriology.
[54] H. Gilbert,et al. Characterization of a double dockerin from the cellulosome of the anaerobic fungus Piromyces equi. , 2007, Journal of molecular biology.
[55] V. Martin,et al. Global View of the Clostridium thermocellum Cellulosome Revealed by Quantitative Proteomic Analysis , 2007, Journal of bacteriology.
[56] E. Bayer,et al. Incorporation of Fungal Cellulases in Bacterial Minicellulosomes Yields Viable, Synergistically Acting Cellulolytic Complexes , 2007, Applied and Environmental Microbiology.
[57] E. Bayer,et al. Degradation of Cellulose Substrates by Cellulosome Chimeras , 2002, The Journal of Biological Chemistry.
[58] J. Heap,et al. A modular system for Clostridium shuttle plasmids. , 2009, Journal of microbiological methods.
[59] Pedro M Alzari,et al. Mapping by site-directed mutagenesis of the region responsible for cohesin-dockerin interaction on the surface of the seventh cohesin domain of Clostridium thermocellum CipA. , 2002, Biochemistry.
[60] G. Davies,et al. Structural changes of the active site tunnel of Humicola insolens cellobiohydrolase, Cel6A, upon oligosaccharide binding. , 1999, Biochemistry.
[61] Mark F. Davis,et al. Efficient Degradation of Lignocellulosic Plant Biomass, without Pretreatment, by the Thermophilic Anaerobe “Anaerocellum thermophilum” DSM 6725 , 2009, Applied and Environmental Microbiology.
[62] Tsutomu Kajino,et al. Cohesin-Dockerin Interactions within and between Clostridium josui and Clostridium thermocellum , 2004, Journal of Biological Chemistry.
[63] Nagiza F. Samatova,et al. Impact of Pretreated Switchgrass and Biomass Carbohydrates on Clostridium thermocellum ATCC 27405 Cellulosome Composition: A Quantitative Proteomic Analysis , 2009, PloS one.
[64] G. Xue,et al. Xylanase B from Neocallimastix patriciarum contains a non-catalytic 455-residue linker sequence comprised of 57 repeats of an octapeptide. , 1994, The Biochemical journal.
[65] F. Zhou,et al. Genome Sequence of the Anaerobic, Thermophilic, and Cellulolytic Bacterium “Anaerocellum thermophilum” DSM 6725 , 2009, Journal of bacteriology.
[66] E. Bayer,et al. Unconventional Mode of Attachment of the Ruminococcus flavefaciens Cellulosome to the Cell Surface , 2005, Journal of bacteriology.
[67] R B Freedman,et al. Cellulases and hemicellulases of the anaerobic fungus Piromyces constitute a multiprotein cellulose-binding complex and are encoded by multigene families. , 1995, FEMS microbiology letters.
[68] Raphael Lamed,et al. Architecture of the Bacteroides cellulosolvens Cellulosome: Description of a Cell Surface-Anchoring Scaffoldin and a Family 48 Cellulase , 2004, Journal of bacteriology.
[69] G J Davies,et al. The X6 "thermostabilizing" domains of xylanases are carbohydrate-binding modules: structure and biochemistry of the Clostridium thermocellum X6b domain. , 2000, Biochemistry.
[70] T. Wood,et al. Studies on the cellulase of the rumen anaerobic fungus Neocallimastix frontalis, with special reference to the capacity of the enzyme to degrade crystalline cellulose , 1992 .
[71] Ruth Y. Eberhardt,et al. Characterization of a cellulosome dockerin domain from the anaerobic fungus Piromyces equi , 2001, Nature Structural Biology.
[72] J. Aubert,et al. Involvement of separate domains of the cellulosomal protein S1 of Clostridium thermocellum in binding to cellulose and in anchoring of catalytic subunits to the cellulosome , 1992, FEBS letters.
[73] R. Doi,et al. Pectate lyase A, an enzymatic subunit of the Clostridium cellulovorans cellulosome , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[74] Brandi L. Cantarel,et al. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics , 2008, Nucleic Acids Res..
[75] Raphael Lamed,et al. A Scaffoldin of the Bacteroides cellulosolvens Cellulosome That Contains 11 Type II Cohesins , 2000, Journal of bacteriology.
[76] Raphael Lamed,et al. Conservation and Divergence in Cellulosome Architecture between Two Strains of Ruminococcus flavefaciens , 2006, Journal of bacteriology.
[77] E. Bayer,et al. Relationship of cellulosomal and noncellulosomal xylanases of Clostridium thermocellum to cellulose-degrading enzymes , 1990, Journal of bacteriology.
[78] M. Lascombe,et al. Atomic (0.94 A) resolution structure of an inverting glycosidase in complex with substrate. , 2002, Journal of molecular biology.
[79] H. Fierobe,et al. Heterologous Production, Assembly, and Secretion of a Minicellulosome by Clostridium acetobutylicum ATCC 824 , 2005, Applied and Environmental Microbiology.
[80] J. Heap,et al. The ClosTron: a universal gene knock-out system for the genus Clostridium. , 2007, Journal of microbiological methods.
[81] D. Bolam,et al. Understanding the Biological Rationale for the Diversity of Cellulose-directed Carbohydrate-binding Modules in Prokaryotic Enzymes* , 2006, Journal of Biological Chemistry.
[82] G P Hazlewood,et al. Evidence that the Piromyces gene family encoding endo-1,4-mannanases arose through gene duplication. , 1996, FEMS microbiology letters.
[83] V. Zverlov,et al. A major new component in the cellulosome of Clostridium thermocellum is a processive endo-beta-1,4-glucanase producing cellotetraose. , 2005, FEMS microbiology letters.
[84] G P Hazlewood,et al. Identification of the cellulose-binding domain of the cellulosome subunit S1 from Clostridium thermocellum YS. , 1992, FEMS microbiology letters.
[85] J. Zeikus,et al. Comparison of Extracellular Cellulase Activities of Clostridium thermocellum LQRI and Trichoderma reesei QM9414 , 1981, Applied and environmental microbiology.
[86] Raphael Lamed,et al. Cellulosome gene cluster analysis for gauging the diversity of the ruminal cellulolytic bacterium Ruminococcus flavefaciens. , 2008, FEMS microbiology letters.
[87] T. Wood,et al. The cellulase of Penicillium pinophilum. Synergism between enzyme components in solubilizing cellulose with special reference to the involvement of two immunologically distinct cellobiohydrolases. , 1986, The Biochemical journal.
[88] Raphael Lamed,et al. A novel family of carbohydrate‐binding modules identified with Ruminococcus albus proteins , 2004, FEBS letters.
[89] A. Demain,et al. Cellulase, Clostridia, and Ethanol , 2005, Microbiology and Molecular Biology Reviews.
[90] H. Gilbert,et al. The Conserved Noncatalytic 40-Residue Sequence in Cellulases and Hemicellulases from Anaerobic Fungi Functions as a Protein Docking Domain (*) , 1995, The Journal of Biological Chemistry.
[91] E. Bayer,et al. Conversion of Thermobifida fusca free exoglucanases into cellulosomal components: comparative impact on cellulose-degrading activity. , 2008, Journal of biotechnology.
[92] D. Bolam,et al. Xyloglucan Is Recognized by Carbohydrate-binding Modules That Interact with β-Glucan Chains* , 2006, Journal of Biological Chemistry.
[93] E. Bayer,et al. The cellulosomes: multienzyme machines for degradation of plant cell wall polysaccharides. , 2004, Annual review of microbiology.
[94] Didier Nurizzo,et al. Promiscuity in ligand-binding: The three-dimensional structure of a Piromyces carbohydrate-binding module, CBM29-2, in complex with cello- and mannohexaose , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[95] P. Dhurjati,et al. Interaction of the duplicated segment carried by Clostridium thermocellum cellulases with cellulosome components , 1991, FEBS letters.
[96] P. Alzari,et al. The crystal structure and catalytic mechanism of cellobiohydrolase CelS, the major enzymatic component of the Clostridium thermocellum Cellulosome. , 2002, Journal of molecular biology.
[97] Robert M. Kelly,et al. Hydrogenomics of the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus , 2008, Applied and Environmental Microbiology.
[98] V. Zverlov,et al. Mutations in the Scaffoldin Gene, cipA, of Clostridium thermocellum with Impaired Cellulosome Formation and Cellulose Hydrolysis: Insertions of a New Transposable Element, IS1447, and Implications for Cellulase Synergism on Crystalline Cellulose , 2008, Journal of bacteriology.
[99] E. Bayer,et al. Cellulose, cellulases and cellulosomes. , 1998, Current opinion in structural biology.
[100] E. Dodson,et al. The Active Site of a Carbohydrate Esterase Displays Divergent Catalytic and Noncatalytic Binding Functions , 2009, PLoS biology.
[101] Raphael Lamed,et al. Cellulosomal Scaffoldin-Like Proteins fromRuminococcus flavefaciens , 2001, Journal of bacteriology.
[102] Raphael Lamed,et al. Cohesin-Dockerin Interaction in Cellulosome Assembly , 2001, The Journal of Biological Chemistry.
[103] W. M. Westler,et al. Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. , 2000, Archives of biochemistry and biophysics.
[104] L. Ljungdahl,et al. Structural role of calcium for the organization of the cellulosome of Clostridium thermocellum. , 1996, Biochemistry.
[105] Z. Jia,et al. Mechanism of bacterial cell-surface attachment revealed by the structure of cellulosomal type II cohesin-dockerin complex. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[106] Edward A Bayer,et al. The Clostridium cellulolyticum Dockerin Displays a Dual Binding Mode for Its Cohesin Partner* , 2008, Journal of Biological Chemistry.
[107] L. Ljungdahl,et al. The cellulosome: the exocellular organelle of Clostridium. , 1993, Annual review of microbiology.
[108] J. Hall,et al. Conserved reiterated domains in Clostridium thermocellum endoglucanases are not essential for catalytic activity. , 1988, Gene.
[109] H. Fierobe,et al. Production of Heterologous and Chimeric Scaffoldins by Clostridium acetobutylicum ATCC 824 , 2004, Journal of bacteriology.
[110] E. Bayer,et al. Adherence of Clostridium thermocellum to cellulose , 1983, Journal of bacteriology.
[111] Charlotte K. Williams,et al. The Path Forward for Biofuels and Biomaterials , 2006, Science.
[112] T. Wood. Fungal cellulases. , 1992, Biochemical Society transactions.
[113] Edward A Bayer,et al. Evidence for a dual binding mode of dockerin modules to cohesins , 2007, Proceedings of the National Academy of Sciences.
[114] Raphael Lamed,et al. Novel Organization and Divergent Dockerin Specificities in the Cellulosome System of Ruminococcus flavefaciens , 2003, Journal of bacteriology.