Discontinuous epitope prediction based on mimotope analysis
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Violaine Moreau | Sylvie Villard | Daniel Laune | Claude Granier | Franck Molina | D. Laune | V. Moreau | F. Molina | C. Granier | S. Villard
[1] A Tramontano,et al. Mapping epitopes on protein surfaces. , 1995, Biopolymers.
[2] Dominique Piquer,et al. Peptide decoys selected by phage display block in vitro and in vivo activity of a human anti-FVIII inhibitor. , 2003, Blood.
[3] M. Delepierre,et al. Scorpion toxins specific for Na+-channels. , 1999, European journal of biochemistry.
[4] B. Stoddard,et al. Structure of a factor VIII C2 domain-immunoglobulin G4kappa Fab complex: identification of an inhibitory antibody epitope on the surface of factor VIII. , 2001, Blood.
[5] Claude Granier,et al. Production of monoclonal antibodies capable of neutralizing dermonecrotic activity of Loxosceles intermedia spider venom and their use in a specific immunometric assay. , 2003, Toxicon : official journal of the International Society on Toxinology.
[6] Vladimir I. Levenshtein,et al. Binary codes capable of correcting deletions, insertions, and reversals , 1965 .
[7] A. Folgori,et al. Mimicking of discontinuous epitopes by phage-displayed peptides, II. Selection of clones recognized by a protective monoclonal antibody against the Bordetella pertussis toxin from phage peptide libraries. , 1993, Gene.
[8] M. V. Van Regenmortel,et al. Antigenicity and immunogenicity of synthetic peptides. , 2001, Biologicals : journal of the International Association of Biological Standardization.
[9] L. Possani,et al. Fab fragments of the monoclonal antibody BCF2 are capable of neutralizing the whole soluble venom from the scorpion Centruroides noxius Hoffmann. , 1996, Toxicon : official journal of the International Society on Toxinology.
[10] Joël Janin,et al. Specific versus non-specific contacts in protein crystals , 1997, Nature Structural Biology.
[11] M H Van Regenmortel,et al. From absolute to exquisite specificity. Reflections on the fuzzy nature of species, specificity and antigenic sites. , 1998, Journal of immunological methods.
[12] M. Delepierre,et al. Solution structure of toxin 2 from centruroides noxius Hoffmann, a beta-scorpion neurotoxin acting on sodium channels. , 1999, Journal of molecular biology.
[13] ANDREAS SCHREIBER,et al. 3D‐Epitope‐Explorer (3DEX): Localization of conformational epitopes within three‐dimensional structures of proteins , 2005, J. Comput. Chem..
[14] Yuan Wang,et al. Screening for PreS specific binding ligands with a phage displayed peptides library. , 2005, World journal of gastroenterology.
[15] R. Bruccoleri,et al. On the attribution of binding energy in antigen-antibody complexes McPC 603, D1.3, and HyHEL-5. , 1989, Biochemistry.
[16] L. Possani,et al. Potential of peptides selected from random phage-displayed libraries to mimic conformational epitopes: a study on scorpion toxin Cn2 and the neutralizing monoclonal antibody BCF2. , 2003, Combinatorial chemistry & high throughput screening.
[17] W. Kabsch,et al. Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features , 1983, Biopolymers.
[18] D. Higgins,et al. Finding flexible patterns in unaligned protein sequences , 1995, Protein science : a publication of the Protein Society.
[19] Ruth Nussinov,et al. SiteLight: Binding‐site prediction using phage display libraries , 2003, Protein science : a publication of the Protein Society.
[20] S J Rodda,et al. A priori delineation of a peptide which mimics a discontinuous antigenic determinant. , 1986, Molecular immunology.
[21] Britta Hardy,et al. A mimotope peptide-based anti-cancer vaccine selected by BAT monoclonal antibody. , 2005, Vaccine.
[22] Algirdas J. Jesaitis,et al. Topological Mapping of Neutrophil Cytochrome b Epitopes with Phage-display Libraries (*) , 1995, The Journal of Biological Chemistry.
[23] J. Janin,et al. Dissecting protein–protein recognition sites , 2002, Proteins.
[24] Stephen Albert Johnston,et al. Peptide-mediated targeting of the islets of Langerhans. , 2005, Diabetes.
[25] F. Corpet. Multiple sequence alignment with hierarchical clustering. , 1988, Nucleic acids research.
[26] Jonathan M Gershoni,et al. The mapping and reconstitution of a conformational discontinuous B-cell epitope of HIV-1. , 2003, Journal of molecular biology.
[27] Jens Stoye,et al. DCA: an efficient implementation of the divide-and-conquer approach to simultaneous multiple sequence alignment , 1997, Comput. Appl. Biosci..
[28] Thais Melo Mendes,et al. Molecular cloning, expression and immunological properties of LiD1, a protein from the dermonecrotic family of Loxosceles intermedia spider venom. , 2002, Toxicon : official journal of the International Society on Toxinology.
[29] Bonnie Kirkpatrick,et al. A New Method for Mapping Discontinuous Antibody Epitopes to Reveal Structural Features of Proteins , 2003, J. Comput. Biol..
[30] E. Horjales,et al. Antibody BCF2 against scorpion toxin cn2 from Centruroides noxius hoffmann: Primary structure and three‐dimensional model as free fv fragment and complexed with its antigen , 1999, Proteins.
[31] D. Tambourgi,et al. Sphingomyelinases in the venom of the spider Loxosceles intermedia are responsible for both dermonecrosis and complement-dependent hemolysis. , 1998, Biochemical and biophysical research communications.
[32] J. Thompson,et al. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.
[33] Burkhard Morgenstern,et al. DIALIGN: finding local similarities by multiple sequence alignment , 1998, Bioinform..
[34] D. Higgins,et al. T-Coffee: A novel method for fast and accurate multiple sequence alignment. , 2000, Journal of molecular biology.
[35] Amos Bairoch,et al. Recent improvements to the PROSITE database , 2004, Nucleic Acids Res..
[36] M F Hoylaerts,et al. Mechanism and kinetics of factor VIII inactivation: study with an IgG4 monoclonal antibody derived from a hemophilia A patient with inhibitor. , 1998, Blood.
[37] Jens Schneider-Mergener,et al. Crystallographic Analysis of Anti-p24 (HIV-1) Monoclonal Antibody Cross-Reactivity and Polyspecificity , 1997, Cell.