Convex-hull voting method on a large data set
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Background Genes work in concert as a system, not as independent entities, to mediate disease states. There has been considerable interest in understanding variations in molecular signatures between normal and disease states. The selective-voting convex-hull ensemble procedure accommodates molecular heterogeneity within and between groups and allows retrieval of sample-specific sets and investigation of variations in individual networks relevant to personalized medicine[1]. The work here describes using the convex-hull voting method on a large data set. Using parallelization techniques, we predict that we can execute the convex-hull voting algorithm on the University of Kentucky cluster (DLX) using a dataset much too large to run in a feasible time on a single machine.
[1] R. Nagarajan,et al. A Selective Voting Convex-Hull Ensemble Procedure for Personalized Medicine , 2012, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.