Fluorescence imaging of physiological activity in complex systems using GFP-based probes

Genetically encoded probes for the optical imaging of excitable cell activity have been constructed by fusing fluorescent proteins to functional proteins that are involved in physiological signaling systems, such as those that control membrane potential, free calcium and cyclic nucleotide concentrations and pH. Using specific promoters and targeting signals, the probes are introduced into an intact organism and directed to specific tissue regions, cell types, and subcellular compartments, thereby extracting specific signals more efficiently and in a more relevant physiological context than before. Optical imaging using genetically encoded probes has enabled us to decipher spatio-temporal information coded in complex tissues.

[1]  M. Ohkura,et al.  A high signal-to-noise Ca2+ probe composed of a single green fluorescent protein , 2001, Nature Biotechnology.

[2]  A Miyawaki,et al.  Dynamic and quantitative Ca2+ measurements using improved cameleons. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[3]  Ronald L. Davis,et al.  Detection of Calcium Transients in DrosophilaMushroom Body Neurons with Camgaroo Reporters , 2003, The Journal of Neuroscience.

[4]  Walther Akemann,et al.  Transgenic mice expressing a pH and Cl– sensing yellow‐fluorescent protein under the control of a potassium channel promoter , 2002, The European journal of neuroscience.

[5]  A. Wong,et al.  Two-Photon Calcium Imaging Reveals an Odor-Evoked Map of Activity in the Fly Brain , 2003, Cell.

[6]  A. Fiala,et al.  Genetically Expressed Cameleon in Drosophila melanogaster Is Used to Visualize Olfactory Information in Projection Neurons , 2002, Current Biology.

[7]  R. Tsien,et al.  green fluorescent protein , 2020, Catalysis from A to Z.

[8]  A Miyawaki,et al.  Beat‐to‐beat oscillations of mitochondrial [Ca2+] in cardiac cells , 2001, The EMBO journal.

[9]  R. Axel,et al.  Odorant Receptors Govern the Formation of a Precise Topographic Map , 1998, Cell.

[10]  A. Miyawaki,et al.  Confocal Imaging of Subcellular Ca2+ Concentrations Using a Dual-Excitation Ratiometric Indicator Based on Green Fluorescent Protein , 2002, Science's STKE.

[11]  Vincent A Pieribone,et al.  A genetically targetable fluorescent probe of channel gating with rapid kinetics. , 2002, Biophysical journal.

[12]  Tullio Pozzan,et al.  Discrete Microdomains with High Concentration of cAMP in Stimulated Rat Neonatal Cardiac Myocytes , 2002, Science.

[13]  Takeharu Nagai,et al.  Shift anticipated in DNA microarray market , 2002, Nature Biotechnology.

[14]  Youxing Jiang,et al.  The principle of gating charge movement in a voltage-dependent K+ channel , 2003, Nature.

[15]  L. Segev,et al.  Conformational Rearrangements Associated with the Gating of the G Protein-Coupled Potassium Channel Revealed by FRET Microscopy , 2003, Neuron.

[16]  Ronald L. Davis,et al.  Molecular biology and anatomy of Drosophila olfactory associative learning , 2001, BioEssays : news and reviews in molecular, cellular and developmental biology.

[17]  A. Miyawaki,et al.  Circadian Dynamics of Cytosolic and Nuclear Ca2+ in Single Suprachiasmatic Nucleus Neurons , 2003, Neuron.

[18]  R. Tsien,et al.  Fluorescent indicators for Ca2+based on green fluorescent proteins and calmodulin , 1997, Nature.

[19]  Y. Umezawa,et al.  Fluorescent indicators for cyclic GMP based on cyclic GMP-dependent protein kinase Ialpha and green fluorescent proteins. , 2000, Analytical chemistry.

[20]  A. Miyawaki,et al.  Development of genetically encoded fluorescent indicators for calcium. , 2003, Methods in enzymology.

[21]  Kevin Truong,et al.  FRET-based in vivo Ca2+ imaging by a new calmodulin-GFP fusion molecule , 2001, Nature Structural Biology.

[22]  M. Trudeau,et al.  Rod Cyclic Nucleotide-Gated Channels Have a Stoichiometry of Three CNGA1 Subunits and One CNGB1 Subunit , 2002, Neuron.

[23]  R. Tsien,et al.  Reducing the Environmental Sensitivity of Yellow Fluorescent Protein , 2001, The Journal of Biological Chemistry.

[24]  D. Reiff,et al.  Differential Regulation of Active Zone Density during Long-Term Strengthening of Drosophila Neuromuscular Junctions , 2002, The Journal of Neuroscience.

[25]  T. Knöpfel,et al.  Design and characterization of a DNA‐encoded, voltage‐sensitive fluorescent protein , 2001, The European journal of neuroscience.

[26]  Ehud Y Isacoff,et al.  A Genetically Encoded Optical Probe of Membrane Voltage , 1997, Neuron.

[27]  Botond Roska,et al.  Tuning FlaSh: redesign of the dynamics, voltage range, and color of the genetically encoded optical sensor of membrane potential. , 2002, Biophysical journal.

[28]  Roger Y. Tsien,et al.  Spatiotemporal dynamics of guanosine 3′,5′-cyclic monophosphate revealed by a genetically encoded, fluorescent indicator , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[29]  R. Kerr,et al.  Optical Imaging of Calcium Transients in Neurons and Pharyngeal Muscle of C. elegans , 2000, Neuron.

[30]  R. Tsien,et al.  Circular permutation and receptor insertion within green fluorescent proteins. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[31]  R. Tsien,et al.  Monitoring protein conformations and interactions by fluorescence resonance energy transfer between mutants of green fluorescent protein. , 2000, Methods in enzymology.

[32]  D. T. Yue,et al.  Preassociation of Calmodulin with Voltage-Gated Ca2+ Channels Revealed by FRET in Single Living Cells , 2001, Neuron.

[33]  A. Miyawaki Visualization of the spatial and temporal dynamics of intracellular signaling. , 2003, Developmental cell.

[34]  Konstantin A Lukyanov,et al.  Family of the green fluorescent protein: journey to the end of the rainbow. , 2002, BioEssays : news and reviews in molecular, cellular and developmental biology.

[35]  A Miyawaki,et al.  Red fluorescent protein from Discosoma as a fusion tag and a partner for fluorescence resonance energy transfer. , 2001, Biochemistry.

[36]  W. Denk,et al.  Two-photon laser scanning fluorescence microscopy. , 1990, Science.