NIRS-SPM: statistical parametric mapping for near infrared spectroscopy

Even though there exists a powerful statistical parametric mapping (SPM) tool for fMRI, similar public domain tools are not available for near infrared spectroscopy (NIRS). In this paper, we describe a new public domain statistical toolbox called NIRS-SPM for quantitative analysis of NIRS signals. Specifically, NIRS-SPM statistically analyzes the NIRS data using GLM and makes inference as the excursion probability which comes from the random field that are interpolated from the sparse measurement. In order to obtain correct inference, NIRS-SPM offers the pre-coloring and pre-whitening method for temporal correlation estimation. For simultaneous recording NIRS signal with fMRI, the spatial mapping between fMRI image and real coordinate in 3-D digitizer is estimated using Horn's algorithm. These powerful tools allows us the super-resolution localization of the brain activation which is not possible using the conventional NIRS analysis tools.

[1]  Karl J. Friston,et al.  To Smooth or Not to Smooth? Bias and Efficiency in fMRI Time-Series Analysis , 2000, NeuroImage.

[2]  Hellmuth Obrig,et al.  Towards a standard analysis for functional near-infrared imaging , 2004, NeuroImage.

[3]  Karl J. Friston,et al.  Analysis of fMRI Time-Series Revisited—Again , 1995, NeuroImage.

[4]  Pierre Moulin,et al.  Asymptotic Global Confidence Regions for 3-D Parametric Shape Estimation in Inverse Problems , 2005, IEEE Transactions on Image Processing.

[5]  F. Jöbsis Noninvasive, infrared monitoring of cerebral and myocardial oxygen sufficiency and circulatory parameters. , 1977, Science.

[6]  Guillaume Flandin,et al.  Functional optical signal analysis: a software tool for near-infrared spectroscopy data processing incorporating statistical parametric mapping. , 2007, Journal of biomedical optics.

[7]  Ann-Christine Ehlis,et al.  Model-based analysis of rapid event-related functional near-infrared spectroscopy (NIRS) data: A parametric validation study , 2007, NeuroImage.

[8]  Karl J. Friston,et al.  Statistical parametric mapping , 2013 .

[9]  Berthold K. P. Horn,et al.  Closed-form solution of absolute orientation using unit quaternions , 1987 .

[10]  Karl J. Friston,et al.  Classical and Bayesian Inference in Neuroimaging: Theory , 2002, NeuroImage.

[11]  Jiayang Sun Tail probabilities of the maxima of Gaussian random fields , 1993 .

[12]  Karl J. Friston,et al.  Detecting Activations in PET and fMRI: Levels of Inference and Power , 1996, NeuroImage.