CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.
暂无分享,去创建一个
[1] D van Soolingen,et al. Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology , 1997, Journal of clinical microbiology.
[2] F. Rodríguez-Valera,et al. Long stretches of short tandem repeats are present in the largest replicons of the Archaea Haloferax mediterranei and Haloferax volcanii and could be involved in replicon partitioning , 1995, Molecular microbiology.
[3] P. Forterre,et al. Pyrococcus genome comparison evidences chromosome shuffling-driven evolution. , 2002, Nucleic acids research.
[4] M Achtman,et al. Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[5] B. Sokhansanj,et al. Genetic Variability of Yersinia pestis Isolates as Predicted by PCR-Based IS100 Genotyping and Analysis of Structural Genes Encoding Glycerol-3-Phosphate Dehydrogenase (glpD) , 2002, Journal of bacteriology.
[6] Andrey P. Anisimov,et al. Intraspecific Diversity of Yersinia pestis , 2004, Clinical Microbiology Reviews.
[7] F. Denoeud,et al. A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis , 2001, BMC Microbiology.
[8] M. Skurnik,et al. Characterization of the O‐antigen gene clusters of Yersinia pseudotuberculosis and the cryptic O‐antigen gene cluster of Yersinia pestis shows that the plague bacillus is most closely related to and has evolved from Y. pseudotuberculosis serotype O:1b , 2000, Molecular microbiology.
[9] P. Le Flèche,et al. High Genetic Diversity Revealed by Variable-Number Tandem Repeat Genotyping and Analysis of hsp65 Gene Polymorphism in a Large Collection of “Mycobacterium canettii” Strains Indicates that the M. tuberculosis Complex Is a Recently Emerged Clone of “M. canettii” , 2004, Journal of Clinical Microbiology.
[10] Gilles Vergnaud,et al. Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains : a web-based resource , 2004, BMC Bioinformatics.
[11] Guy Plunkett,et al. Genome Sequence of Yersinia pestis KIM , 2002, Journal of bacteriology.
[12] M. Simmonds,et al. Genome sequence of Yersinia pestis, the causative agent of plague , 2001, Nature.
[13] Georges-Félix Treille,et al. La peste bubonique a Hong-kong , 1894 .
[14] F. Ramisse,et al. Antibiotic susceptibilities of 94 isolates of Yersinia pestis to 24 antimicrobial agents. , 2003, The Journal of antimicrobial chemotherapy.
[15] Ruud Jansen,et al. Genetic Variation and Evolutionary Origin of the Direct Repeat Locus of Mycobacterium tuberculosis Complex Bacteria , 2000, Journal of bacteriology.
[16] Nalin Rastogi,et al. Genotyping of the Mycobacterium tuberculosis complex using MIRUs: association with VNTR and spoligotyping for molecular epidemiology and evolutionary genetics. , 2003, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
[17] Nick V Grishin,et al. A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis. , 2002, Nucleic acids research.
[18] G. Andersen,et al. Genome plasticity in Yersinia pestis. , 2002, Microbiology.
[19] F. Ramisse,et al. Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis , 2004, BMC Microbiology.
[20] L. Schouls,et al. Identification of genes that are associated with DNA repeats in prokaryotes , 2002, Molecular microbiology.
[21] Rob J. L. Willems,et al. Comparative Genotyping of Campylobacter jejuni by Amplified Fragment Length Polymorphism, Multilocus Sequence Typing, and Short Repeat Sequencing: Strain Diversity, Host Range, and Recombination , 2003, Journal of Clinical Microbiology.
[22] T. Embley. The linear PCR reaction: a simple and robust method for sequencing amplified rRNA genes , 1991, Letters in applied microbiology.
[23] R. Nichols,et al. Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis. , 2003, Genome research.
[24] Ruifu Yang,et al. Genetics of Metabolic Variations between Yersinia pestis Biovars and the Proposal of a New Biovar, microtus , 2004, Journal of bacteriology.
[25] P. Groenen,et al. Nature of DNA polymorphism in the direct repeat cluster of Mycobacterium tuberculosis; application for strain differentiation by a novel typing method , 1993, Molecular microbiology.
[26] J. Musser,et al. Rapid molecular genetic subtyping of serotype M1 group A Streptococcus strains. , 1999, Emerging infectious diseases.
[27] Meng-Yao Liu,et al. Genome sequence of a serotype M3 strain of group A Streptococcus: Phage-encoded toxins, the high-virulence phenotype, and clone emergence , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[28] F. J. Mojica,et al. Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria , 2000, Molecular microbiology.