Phylogeography of Solomon Islands blossom bats reflects oceanic divides and Pleistocene connections

Periodic lowering of sea levels and formation of land bridges can reshape phylogeographic patterns of insular biotas. Using archipelago‐wide sampling, we aimed to test if phylogeography of an old‐endemic bat lineage reflected Pleistocene land bridges.

[1]  Michael J. Andersen,et al.  PleistoDist: A toolbox for visualising and quantifying the effects of Pleistocene sea-level change on island archipelagos , 2022, bioRxiv.

[2]  C. Filardi,et al.  Gene flow and rapid differentiation characterize a rapid insular radiation in the southwest Pacific (Aves: Zosterops) , 2020, Evolution; international journal of organic evolution.

[3]  N. Simmons,et al.  A Species-Level Phylogeny of Old World Fruit Bats with a New Higher-Level Classification of the Family Pteropodidae , 2020, American Museum Novitates.

[4]  E. Tasker,et al.  Ecological generalism and resilience of tropical island mammals to logging: A 23 year test , 2020, Global change biology.

[5]  P. Fabre,et al.  Oceanic islands of Wallacea as a source for dispersal and diversification of murine rodents , 2019, Journal of Biogeography.

[6]  P. Wessel,et al.  Global Bathymetry and Topography at 15 Arc Sec: SRTM15+ , 2019, Earth and Space Science.

[7]  C. Lindqvist,et al.  A molecular phylogeny for the Pacific monitor lizards (Varanus subgenus Euprepiosaurus) reveals a recent and rapid radiation with high levels of cryptic diversity , 2019, Zoological Journal of the Linnean Society.

[8]  Shai Meiri,et al.  Early insularity and subsequent mountain uplift were complementary drivers of diversification in a Melanesian lizard radiation (Gekkonidae: Cyrtodactylus). , 2018, Molecular phylogenetics and evolution.

[9]  William A. Freyman,et al.  Retracing the Hawaiian silversword radiation despite phylogenetic, biogeographic, and paleogeographic uncertainty , 2018, bioRxiv.

[10]  K. Jønsson,et al.  Phylogeography of a ‘great speciator’ (Aves: Edolisoma tenuirostre) reveals complex dispersal and diversification dynamics across the Indo‐Pacific , 2018 .

[11]  R. Francis,et al.  pophelper: an R package and web app to analyse and visualize population structure , 2017, Molecular ecology resources.

[12]  Emmanuel F. A. Toussaint,et al.  Bayesian Poisson tree processes and multispecies coalescent models shed new light on the diversification of Nawab butterflies in the Solomon Islands (Nymphalidae, Charaxinae, Polyura) , 2016 .

[13]  B. Faircloth,et al.  Tectonic collision and uplift of Wallacea triggered the global songbird radiation , 2016, Nature Communications.

[14]  D. Cannatella,et al.  Multilocus phylogeny and a new classification for Southeast Asian and Melanesian forest frogs (family Ceratobatrachidae) , 2015 .

[15]  Laura Salter Kubatko,et al.  Quartet Inference from SNP Data Under the Coalescent Model , 2014, Bioinform..

[16]  K. Lambeck,et al.  Sea level and global ice volumes from the Last Glacial Maximum to the Holocene , 2014, Proceedings of the National Academy of Sciences.

[17]  L. Leung,et al.  Molecular phylogeny of hipposiderid bats (Chiroptera: Hipposideridae) from Solomon Islands and Cape York Peninsula, Australia , 2014 .

[18]  Emmanuel F. A. Toussaint,et al.  The towering orogeny of New Guinea as a trigger for arthropod megadiversity , 2014, Nature Communications.

[19]  Alexandros Stamatakis,et al.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies , 2014, Bioinform..

[20]  N. Cogan,et al.  StAMPP: an R package for calculation of genetic differentiation and structure of mixed‐ploidy level populations , 2013, Molecular ecology resources.

[21]  Angel Amores,et al.  Stacks: an analysis tool set for population genomics , 2013, Molecular ecology.

[22]  S. Donnellan,et al.  Phylogeography of the prehensile-tailed skink Corucia zebrata on the Solomon Archipelago , 2012, Ecology and evolution.

[23]  Joseph K. Pickrell,et al.  Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data , 2012, PLoS genetics.

[24]  R. DeSalle,et al.  Evolutionary relationships of the old world fruit bats (Chiroptera, Pteropodidae): Another star phylogeny? , 2011, BMC Evolutionary Biology.

[25]  James Rosindell,et al.  A unified model of island biogeography sheds light on the zone of radiation. , 2011, Ecology letters.

[26]  Tina T. Hu,et al.  Multiplexed shotgun genotyping for rapid and efficient genetic mapping. , 2011, Genome research.

[27]  S. Kalinowski,et al.  The computer program STRUCTURE does not reliably identify the main genetic clusters within species: simulations and implications for human population structure , 2011, Heredity.

[28]  J. Woinarski.  Biodiversity conservation in tropical forest landscapes of Oceania , 2010 .

[29]  D. Fabre,et al.  Global Bathymetry and Elevation Data at 30 Arc Seconds Resolution: SRTM30_PLUS , 2009 .

[30]  O. Thomas.  On the Bats collected by Mr. C. M. Woodford in the Solomon Islands , 2009 .

[31]  J. Diamond,et al.  Explosive Pleistocene diversification and hemispheric expansion of a “great speciator” , 2009, Proceedings of the National Academy of Sciences.

[32]  J. Uy,et al.  PLUMAGE AND SONG DIFFERENCES MEDIATE SPECIES RECOGNITION BETWEEN INCIPIENT FLYCATCHER SPECIES OF THE SOLOMON ISLANDS , 2009, Evolution; international journal of organic evolution.

[33]  R. S. W. van de Wal,et al.  North American ice-sheet dynamics and the onset of 100,000-year glacial cycles , 2008, Nature.

[34]  Kate E. Jones,et al.  The predictability of extinction: biological and external correlates of decline in mammals , 2008, Proceedings of the Royal Society B: Biological Sciences.

[35]  S. Albert,et al.  Dramatic tectonic uplift of fringing reefs on Ranongga Is., Solomon Islands , 2007, Coral Reefs.

[36]  L. Heaney.  Is a new paradigm emerging for oceanic island biogeography? , 2007 .

[37]  D. Colgan,et al.  Molecular phylogeography of the fruit bat genus Melonycteris in northern Melanesia , 2007 .

[38]  C. Filardi,et al.  PATTERNS OF MOLECULAR AND MORPHOLOGICAL VARIATION IN SOME SOLOMON ISLAND LAND BIRDS , 2007 .

[39]  R. Eastwood,et al.  Island radiation on a continental scale: Exceptional rates of plant diversification after uplift of the Andes , 2006, Proceedings of the National Academy of Sciences.

[40]  D. Huson,et al.  Application of phylogenetic networks in evolutionary studies. , 2006, Molecular biology and evolution.

[41]  C. Filardi,et al.  Molecular phylogenetics of monarch flycatchers (genus Monarcha) with emphasis on Solomon Island endemics. , 2005, Molecular phylogenetics and evolution.

[42]  P. Mann,et al.  Oligocene to Recent tectonic history of the Central Solomon intra-arc basin as determined from marine seismic reflection data and compilation of onland geology , 2004 .

[43]  N. Simmons,et al.  A phylogeny of megachiropteran bats (Mammalia: Chiroptera: Pteropodidae) based on direct optimization analysis of one nuclear and four mitochondrial genes , 2003, Cladistics : the international journal of the Willi Hennig Society.

[44]  R. Hall.  Cenozoic geological and plate tectonic evolution of SE Asia and the SW Pacific: computer-based reconstructions, model and animations , 2002 .

[45]  J. L. Gittleman,et al.  Predicting extinction risk in declining species , 2000, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[46]  P. Donnelly,et al.  Inference of population structure using multilocus genotype data. , 2000, Genetics.

[47]  A. D. Saunders,et al.  Geological tectonic framework of Solomon Islands, SW Pacific: crustal accretion and growth within an intra-oceanic setting , 1999 .

[48]  G. Burr,et al.  Accelerating late Quaternary uplift of the New Georgia Island Group (Solomon island arc) in response to subduction of the recently active Woodlark spreading center and Coleman seamount , 1998 .

[49]  T. Flannery.  Revision of the genus Melonycteris (Pteropodidae: Mammalia) , 1993 .

[50]  R. Macarthur,et al.  The Theory of Island Biogeography , 1969 .

[51]  R. Macarthur,et al.  The Limiting Similarity, Convergence, and Divergence of Coexisting Species , 1967, The American Naturalist.

[52]  R. Zweifel.  Identity of the Frog Cornufer unicolor and Application of the Generic Name Cornufer , 1967 .

[53]  R. Macarthur,et al.  AN EQUILIBRIUM THEORY OF INSULAR ZOOGEOGRAPHY , 1963 .

[54]  Edward O. Wilson,et al.  The Nature of the Taxon Cycle in the Melanesian Ant Fauna , 1961, The American Naturalist.

[55]  Tyrone H. Lavery,et al.  The mammals of northern Melanesia: speciation, ecology, and biogeography , 2016 .

[56]  C. Amante,et al.  ETOPO1 arc-minute global relief model : procedures, data sources and analysis , 2009 .

[57]  P. Raven,et al.  The age and origin of the Pacific islands : a geological overview , 2008 .

[58]  Mark V. Lomolino.  A species‐based theory of insular zoogeography , 2000 .

[59]  M. P. Cummings,et al.  PAUP* Phylogenetic analysis using parsimony (*and other methods) Version 4 , 2000 .

[60]  T. Flannery.  Mammals of the South-West Pacific & Moluccan Islands , 1995 .

[61]  G. E. Dobson.  On a collection of Chiroptera from Duke-Of-York Island and adjacent parts of New Ireland and New Britain , 2022 .