Identifying signatures of positive selection in human populations from North Africa
暂无分享,去创建一个
[1] D. Comas,et al. The genomic analysis of current-day North African populations reveals the existence of trans-Saharan migrations with different origins and dates , 2022, Human Genetics.
[2] P. Gunz,et al. The relevance of late MSA mandibles on the emergence of modern morphology in Northern Africa , 2022, Scientific Reports.
[3] S. Sargazi,et al. Single nucleotide polymorphisms located in TNFA, IL1RN, IL6R, and IL6 genes are associated with COVID‐19 risk and severity in an Iranian population , 2022, Cell biology international.
[4] R. Fregel. Paleogenomics of the Neolithic Transition in North Africa , 2021, Africa, the Cradle of Human Diversity.
[5] Hie-Lim Kim,et al. Population-specific adaptation in malaria-endemic regions of asia , 2021, J. Bioinform. Comput. Biol..
[6] S. Chatterjee,et al. The influence of IL1RN VNTR polymorphism on HPV infection among some tribal communities , 2021, Journal of medical virology.
[7] D. Comas,et al. Whole-exome analysis in Tunisian Imazighen and Arabs shows the impact of demography in functional variation , 2021, Scientific Reports.
[8] C. Marean,et al. A worked bone assemblage from 120,000–90,000 year old deposits at Contrebandiers Cave, Atlantic Coast, Morocco , 2021, iScience.
[9] L. Quintana-Murci,et al. The genomic signatures of natural selection in admixed human populations , 2021, bioRxiv.
[10] Gretchen A. Stevens,et al. Worldwide trends in hypertension prevalence and progress in treatment and control from 1990 to 2019: a pooled analysis of 1201 population-representative studies with 104 million participants , 2021, The Lancet.
[11] S. Tishkoff,et al. Evolutionary genetics of skin pigmentation in African populations. , 2021, Human molecular genetics.
[12] Thomas M. Keane,et al. Twelve years of SAMtools and BCFtools , 2020, GigaScience.
[13] C. Tyler-Smith,et al. The genomic history of the Middle East , 2020, Cell.
[14] Tsippi Iny Stein,et al. The GeneCards Suite , 2021, Practical Guide to Life Science Databases.
[15] D. Comas,et al. Population history of North Africa based on modern and ancient genomes. , 2020, Human molecular genetics.
[16] Amanda M Li,et al. CRISPR-Cas9 Gene Editing for Sickle Cell Disease and β-Thalassemia. , 2020, The New England journal of medicine.
[17] H. S. Kang,et al. Transcription factor GLIS3: Critical roles in thyroid hormone biosynthesis, hypothyroidism, pancreatic beta cells and diabetes. , 2020, Pharmacology & therapeutics.
[18] S. Castellano,et al. The Genomics of Human Local Adaptation. , 2020, Trends in genetics : TIG.
[19] N. Soranzo,et al. A bird’s-eye view of Italian genomic variation through whole-genome sequencing , 2019, European Journal of Human Genetics.
[20] D. Comas,et al. Heterogeneity in Palaeolithic Population Continuity and Neolithic Expansion in North Africa , 2019, Current Biology.
[21] Matthew R. Robinson,et al. Accurate, scalable and integrative haplotype estimation , 2019, Nature Communications.
[22] Aaron J. Stern,et al. An approximate full-likelihood method for inferring selection and allele frequency trajectories from DNA sequence data , 2019, bioRxiv.
[23] L. Quintana-Murci. Human Immunology through the Lens of Evolutionary Genetics , 2019, Cell.
[24] R. Nielsen,et al. Ohana: detecting selection in multiple populations by modelling ancestral admixture components , 2019, bioRxiv.
[25] S. Myers,et al. A method for genome-wide genealogy estimation for thousands of samples , 2019, Nature Genetics.
[26] S. Thein,et al. Genetic Modifiers of Fetal Haemoglobin in Sickle Cell Disease , 2018, Molecular Diagnosis & Therapy.
[27] C. Tamone,et al. Vitamin D: Nutrient, Hormone, and Immunomodulator , 2018, Nutrients.
[28] N. Barton,et al. 90,000 year-old specialised bone technology in the Aterian Middle Stone Age of North Africa , 2018, PloS one.
[29] B. Nickel,et al. Pleistocene North African genomes link Near Eastern and sub-Saharan African human populations , 2018, Science.
[30] B. Liu,et al. Genetic Variation in SLC8A1 Gene Involved in Blood Pressure Responses to Acute Salt Loading , 2018, American journal of hypertension.
[31] C. Bustamante,et al. Ancient genomes from North Africa evidence prehistoric migrations to the Maghreb from both the Levant and Europe , 2018, Proceedings of the National Academy of Sciences.
[32] D. Comas,et al. The genetic landscape of Mediterranean North African populations through complete mtDNA sequences , 2018, Annals of human biology.
[33] T. Clark,et al. Novel genetic polymorphisms associated with severe malaria and under selective pressure in North-eastern Tanzania , 2018, PLoS genetics.
[34] Stefano Benazzi,et al. Author Correction: New fossils from Jebel Irhoud, Morocco and the pan-African origin of Homo sapiens , 2017, Nature.
[35] D. Comas,et al. Genetic Heterogeneity between Berbers and Arabs , 2017 .
[36] C. Giuliani,et al. Lactase persistence in Tunisia as a result of admixture with other Mediterranean populations , 2017, Genes & Nutrition.
[37] D. Meyer,et al. A genomic perspective on HLA evolution , 2017, Immunogenetics.
[38] J. Hublin,et al. The age of the hominin fossils from Jebel Irhoud, Morocco, and the origins of the Middle Stone Age , 2017, Nature.
[39] Eleanor M. L. Scerri. The North African Middle Stone Age and its place in recent human evolution , 2017, Evolutionary anthropology.
[40] M. Clerici,et al. TLR3 Mutations in Adult Patients With Herpes Simplex Virus and Varicella-Zoster Virus Encephalitis , 2017, The Journal of infectious diseases.
[41] Bin Liu,et al. Genetic susceptibility to salt-sensitive hypertension in a Han Chinese population: a validation study of candidate genes , 2017, Hypertension Research.
[42] Christopher R. Gignoux,et al. Human demographic history impacts genetic risk prediction across diverse populations , 2016, bioRxiv.
[43] Minoru Kanehisa,et al. KEGG: new perspectives on genomes, pathways, diseases and drugs , 2016, Nucleic Acids Res..
[44] G. Hellenthal,et al. Recent Historical Migrations Have Shaped the Gene Pool of Arabs and Berbers in North Africa , 2016, Molecular biology and evolution.
[45] A. Zazzo,et al. The emergence of the Neolithic in North Africa: A new model for the Eastern Maghreb , 2016 .
[46] Kyle J. Gaulton,et al. Detection of human adaptation during the past 2000 years , 2016, Science.
[47] F. Cunningham,et al. The Ensembl Variant Effect Predictor , 2016, bioRxiv.
[48] J. Casanova,et al. Genomic Signatures of Selective Pressures and Introgression from Archaic Hominins at Human Innate Immunity Genes. , 2016, American journal of human genetics.
[49] S. Moulessehoul,et al. Effect of IL-1β and IL-1RN polymorphisms in carcinogenesis of the gastric mucosa in patients infected with Helicobacter pylori in Algeria , 2016, The Libyan journal of medicine.
[50] Henning Hermjakob,et al. The Reactome pathway Knowledgebase , 2015, Nucleic acids research.
[51] Sohini Ramachandran,et al. pong: fast analysis and visualization of latent clusters in population genetic data , 2015, bioRxiv.
[52] Tiago J. S. Lopes,et al. Loss of Interleukin 1 Receptor Antagonist Enhances Susceptibility to Ebola Virus Infection. , 2015, The Journal of infectious diseases.
[53] Gabor T. Marth,et al. A global reference for human genetic variation , 2015, Nature.
[54] A. Fijarczyk,et al. Detecting balancing selection in genomes: limits and prospects , 2015, Molecular ecology.
[55] Albert Hofman,et al. A Genome-Wide Association Study Identifies the Skin Color Genes IRF4, MC1R, ASIP, and BNC2 Influencing Facial Pigmented Spots. , 2015, The Journal of investigative dermatology.
[56] Massimo Gadina,et al. The JAK-STAT pathway: impact on human disease and therapeutic intervention. , 2015, Annual review of medicine.
[57] François Schiettecatte,et al. OMIM.org: Online Mendelian Inheritance in Man (OMIM®), an online catalog of human genes and genetic disorders , 2014, Nucleic Acids Res..
[58] Carson C Chow,et al. Second-generation PLINK: rising to the challenge of larger and richer datasets , 2014, GigaScience.
[59] Melinda C Aldrich,et al. Genome-wide scan of 29,141 African Americans finds no evidence of directional selection since admixture. , 2014, American journal of human genetics.
[60] Liqun Luo,et al. A molecular basis for classic blond hair color in Europeans , 2014, Nature Genetics.
[61] Pardis C. Sabeti,et al. Natural selection and infectious disease in human populations , 2014, Nature Reviews Genetics.
[62] Jing Wang,et al. CrossMap: a versatile tool for coordinate conversion between genome assemblies , 2014, Bioinform..
[63] Zachary A. Szpiech,et al. selscan: An Efficient Multithreaded Program to Perform EHH-Based Scans for Positive Selection , 2014, Molecular biology and evolution.
[64] Peggy Hall,et al. The NHGRI GWAS Catalog, a curated resource of SNP-trait associations , 2013, Nucleic Acids Res..
[65] P. Ditchfield,et al. Origins of the Iberomaurusian in NW Africa: new AMS radiocarbon dating of the Middle and Later Stone Age deposits at Taforalt Cave, Morocco. , 2013, Journal of human evolution.
[66] C. Bustamante,et al. RFMix: a discriminative modeling approach for rapid and robust local-ancestry inference. , 2013, American journal of human genetics.
[67] R. Cagliani,et al. Pathogen-Driven Selection in the Human Genome , 2013, International Journal of Evolutionary Biology.
[68] J. Shipp,et al. Phytolith evidence of mid-Holocene Capsian subsistence economies in North Africa , 2013 .
[69] Sacha C. Jones,et al. Divorcing the Late Upper Palaeolithic demographic histories of mtDNA haplogroups M1 and U6 in Africa , 2012, BMC Evolutionary Biology.
[70] Andre Franke,et al. Genome-wide association study indicates two novel resistance loci for severe malaria , 2012, Nature.
[71] Y. S. Cho,et al. A common variant in SLC8A1 is associated with the duration of the electrocardiographic QT interval. , 2012, American journal of human genetics.
[72] L. Contu,et al. Genome-wide scan with nearly 700 000 SNPs in two Sardinian sub-populations suggests some regions as candidate targets for positive selection , 2012, European Journal of Human Genetics.
[73] M. Clerici,et al. A Common Polymorphism in TLR3 Confers Natural Resistance to HIV-1 Infection , 2012, The Journal of Immunology.
[74] Jake K. Byrnes,et al. Genomic Ancestry of North Africans Supports Back-to-Africa Migrations , 2012, PLoS genetics.
[75] E. Garcea. Modern Human Desert Adaptations: A Libyan Perspective on the Aterian Complex , 2012 .
[76] R. Nielsen,et al. Signatures of Environmental Genetic Adaptation Pinpoint Pathogens as the Main Selective Pressure through Human Evolution , 2011, PLoS genetics.
[77] Gonçalo R. Abecasis,et al. The variant call format and VCFtools , 2011, Bioinform..
[78] D. Barford,et al. Multiple Factors Confer Specific Cdc42 and Rac Protein Activation by Dedicator of Cytokinesis (DOCK) Nucleotide Exchange Factors* , 2011, The Journal of Biological Chemistry.
[79] P. Gregersen,et al. Evidence for malaria selection of a CR1 haplotype in Sardinia , 2011, Genes and Immunity.
[80] A. Andrés. Balancing Selection in the Human Genome , 2011 .
[81] A. Torroni,et al. Mitochondrial Haplogroup H1 in North Africa: An Early Holocene Arrival from Iberia , 2010, PloS one.
[82] Rui Mei,et al. Identifying Signatures of Natural Selection in Tibetan and Andean Populations Using Dense Genome Scan Data , 2010, PLoS genetics.
[83] Asan,et al. Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude , 2010, Science.
[84] N. Jablonski,et al. Human skin pigmentation as an adaptation to UV radiation , 2010, Proceedings of the National Academy of Sciences.
[85] L. Pereira,et al. The trans-Saharan slave trade - clues from interpolation analyses and high-resolution characterization of mitochondrial DNA lineages , 2010, BMC Evolutionary Biology.
[86] David H. Alexander,et al. Fast model-based estimation of ancestry in unrelated individuals. , 2009, Genome research.
[87] Joseph K. Pickrell,et al. Signals of recent positive selection in a worldwide sample of human populations. , 2009, Genome research.
[88] P. Sebastiani,et al. BCL11A is a major HbF quantitative trait locus in three different populations with beta-hemoglobinopathies. , 2008, Blood cells, molecules & diseases.
[89] T. Higham,et al. Reevaluating the Age of the Iberomaurusian in Morocco , 2008 .
[90] D. Lubell,et al. Early and Middle Holocene Environments and Capsian Cultural Change: Evidence from the Télidjène Basin, Eastern Algeria , 2008 .
[91] Gonçalo R. Abecasis,et al. Genome-wide association study shows BCL11A associated with persistent fetal hemoglobin and amelioration of the phenotype of β-thalassemia , 2008, Proceedings of the National Academy of Sciences.
[92] Jacques Neefjes,et al. MHC class II molecules on the move for successful antigen presentation , 2008, The EMBO journal.
[93] Snæbjörn Pálsson,et al. Genetic determinants of hair, eye and skin pigmentation in Europeans , 2007, Nature Genetics.
[94] Pardis C Sabeti,et al. Genome-wide detection and characterization of positive selection in human populations , 2007, Nature.
[95] A. Navarro,et al. Signatures of Positive Selection in Genes Associated with Human Skin Pigmentation as Revealed from Analyses of Single Nucleotide Polymorphisms , 2007, Annals of human genetics.
[96] Holly M. Mortensen,et al. Convergent adaptation of human lactase persistence in Africa and Europe , 2007, Nature Genetics.
[97] E. Hill,et al. Cellular Inheritance , 2006, PLoS biology.
[98] D. Reich,et al. Population Structure and Eigenanalysis , 2006, PLoS genetics.
[99] J. Pritchard,et al. A Map of Recent Positive Selection in the Human Genome , 2006, PLoS biology.
[100] Keith C. Cheng,et al. SLC24A5, a Putative Cation Exchanger, Affects Pigmentation in Zebrafish and Humans , 2005, Science.
[101] A. Chakravarti,et al. Differential Susceptibility to Hypertension Is Due to Selection during the Out-of-Africa Expansion , 2005, PLoS genetics.
[102] D. Kwiatkowski. How malaria has affected the human genome and what human genetics can teach us about malaria. , 2005, American journal of human genetics.
[103] F. Balloux,et al. Pathogen-Driven Selection and Worldwide HLA Class I Diversity , 2005, Current Biology.
[104] David B. Witonsky,et al. CYP3A variation and the evolution of salt-sensitivity variants. , 2004, American journal of human genetics.
[105] Takahiro Iwamoto,et al. Salt-sensitive hypertension is triggered by Ca2+ entry via Na+/Ca2+ exchanger type-1 in vascular smooth muscle , 2004, Nature Medicine.
[106] N. Saitou,et al. Natural selection and population history in the human angiotensinogen gene (AGT): 736 complete AGT sequences in chromosomes from around the world. , 2004, American journal of human genetics.
[107] Noura Rahmani. Technological and Cultural Change Among the Last Hunter-Gatherers of the Maghreb: The Capsian (10,000–6000 B.P.) , 2004 .
[108] T. Seya,et al. Toll‐Like Receptor 3: A Link between Toll‐Like Receptor, Interferon and Viruses , 2004, Microbiology and immunology.
[109] B Marshall,et al. Gene Ontology Consortium: The Gene Ontology (GO) database and informatics resource , 2004, Nucleic Acids Res..
[110] Gene Ontology Consortium. The Gene Ontology (GO) database and informatics resource , 2003 .
[111] P. Underhill,et al. High-resolution analysis of human Y-chromosome variation shows a sharp discontinuity and limited gene flow between northwestern Africa and the Iberian Peninsula. , 2001, American journal of human genetics.
[112] A. Pérez-Lezaun,et al. Population history of north Africa: evidence from classical genetic markers. , 1997, Human biology.
[113] R. Balczon,et al. Suppression of the Expression of a Pancreatic β-Cell Form of the Kinesin Heavy Chain by Antisense Oligonucleotides Inhibits Insulin Secretion from Primary Cultures of Mouse β-Cells. , 1997, Endocrinology.
[114] R. Balczon,et al. Suppression of the expression of a pancreatic beta-cell form of the kinesin heavy chain by antisense oligonucleotides inhibits insulin secretion from primary cultures of mouse beta-cells. , 1997, Endocrinology.
[115] W. Knapp,et al. Stimulation of T cells via CD44 requires leukocyte-function-associated antigen interactions and interleukin-2 production. , 1994, Human immunology.
[116] D. Nicoll,et al. Mapping of the gene for the cardiac sarcolemmal Na(+)-Ca2+ exchanger to human chromosome 2p21-p23. , 1992, Genomics.
[117] B. Weir,et al. ESTIMATING F‐STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE , 1984, Evolution; international journal of organic evolution.