In silico analysis of autoimmune diseases and genetic relationships to vaccination against infectious diseases
暂无分享,去创建一个
Baris E. Suzek | S. Madhavan | S. Lababidi | P. McGarvey | R. Forshee | J. Baraniuk | Shruti Rao | Brian Conkright | Andrea Sutherland
[1] Thomas C. Wiegers,et al. The Comparative Toxicogenomics Database: update 2013 , 2012, Nucleic Acids Res..
[2] S. Sakamoto,et al. Novel roles of TLR3 tyrosine phosphorylation and PI3 kinase in double-stranded RNA signaling , 2004, Nature Structural &Molecular Biology.
[3] V. McKusick. Mendelian Inheritance in Man and Its Online Version, OMIM , 2007, The American Journal of Human Genetics.
[4] Trey Ideker,et al. Cytoscape 2.8: new features for data integration and network visualization , 2010, Bioinform..
[5] W. Lukiw,et al. Nanomolar aluminum induces pro-inflammatory and pro-apoptotic gene expression in human brain cells in primary culture. , 2005, Journal of inorganic biochemistry.
[6] Kiyoko F. Aoki-Kinoshita,et al. Gene annotation and pathway mapping in KEGG. , 2007, Methods in molecular biology.
[7] S. Gullans,et al. Genomic organization of the gene coding for TIRC7, a novel membrane protein essential for T cell activation. , 1999, Genomics.
[8] Michael Aschner,et al. Cultured lymphocytes from autistic children and non-autistic siblings up-regulate heat shock protein RNA in response to thimerosal challenge. , 2006, Neurotoxicology.
[9] M E J Newman,et al. Modularity and community structure in networks. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[10] A. Zhernakova,et al. Detecting shared pathogenesis from the shared genetics of immune-related diseases , 2009, Nature Reviews Genetics.
[11] L. Kurland,et al. An epidemiologic and clinical evaluation of Guillain-Barré syndrome reported in association with the administration of swine influenza vaccines. , 1984, American journal of epidemiology.
[12] Kozo Nakamura,et al. Opposing Extracellular Signal-Regulated Kinase and Akt Pathways Control Schwann Cell Myelination , 2004, The Journal of Neuroscience.
[13] Lingyun Sun,et al. Inhibition of Aberrant Circulating Tfh Cell Proportions by Corticosteroids in Patients with Systemic Lupus Erythematosus , 2012, PloS one.
[14] Julia Romanova,et al. Influenza A mutant viruses with altered NS1 protein function provoke caspase-1 activation in primary human macrophages, resulting in fast apoptosis and release of high levels of interleukins 1beta and 18. , 2005, The Journal of general virology.
[15] M. Haftek,et al. Characterization of early events involved in human dendritic cell maturation induced by sensitizers: cross talk between MAPK signalling pathways. , 2008, Toxicology and applied pharmacology.
[16] Wei Chen,et al. Molecular cloning and characterization of a putative novel human osteoclast-specific 116-kDa vacuolar proton pump subunit. , 1996, Biochemical and biophysical research communications.
[17] Yanli Wang,et al. PubChem: a public information system for analyzing bioactivities of small molecules , 2009, Nucleic Acids Res..
[18] N. Shimizu,et al. Charcot–Marie–Tooth neuropathy type 1B is associated with mutations of the myelin P0 gene , 1993, Nature Genetics.
[19] M. Takami,et al. Osteoimmunology: interactions of the immune and skeletal systems. , 2004, Molecules and Cells.
[20] Hung-Chou Kuo,et al. Identification of Gene Networks and Pathways Associated with Guillain-Barré Syndrome , 2012, PloS one.
[21] The UniProt Consortium,et al. Update on activities at the Universal Protein Resource (UniProt) in 2013 , 2012, Nucleic Acids Res..
[22] Johannes G. Bode,et al. Influenza A Virus NS1 Protein Activates the PI3K/Akt Pathway To Mediate Antiapoptotic Signaling Responses , 2007, Journal of Virology.
[23] Christopher G. Chute,et al. BioPortal: ontologies and integrated data resources at the click of a mouse , 2009, Nucleic Acids Res..
[24] In silico analysis of autoimmune diseases and genetic relationships to vaccination against infectious diseases , 2013, BCB.
[25] N. Campbell. Genetic association database , 2004, Nature Reviews Genetics.
[26] K. Ozato,et al. Interferon Regulatory Factor-2 Regulates Cell Growth through Its Acetylation* , 2003, Journal of Biological Chemistry.
[27] E. Brown,et al. The Medical Dictionary for Regulatory Activities (MedDRA) , 1999, Drug safety.
[28] B. Howard,et al. The Transcriptional Coactivators p300 and CBP Are Histone Acetyltransferases , 1996, Cell.
[29] Emily Dimmer,et al. The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology , 2004, Nucleic Acids Res..
[30] P. Miossec,et al. Human interleukin-17: A T cell-derived proinflammatory cytokine produced by the rheumatoid synovium. , 1999, Arthritis and rheumatism.
[31] T. Hupp,et al. Interferon Regulatory Factor 1 Binding to p300 Stimulates DNA-Dependent Acetylation of p53 , 2004, Molecular and Cellular Biology.
[32] Eva K. Lee,et al. Systems Biology of Seasonal Influenza Vaccination in Humans , 2011, Nature Immunology.
[33] A. Bauer-Mehren,et al. Gene-Disease Network Analysis Reveals Functional Modules in Mendelian, Complex and Environmental Diseases , 2011, PloS one.
[34] Huaxi Xu,et al. Increased Frequency of Circulating Follicular Helper T Cells in Patients with Rheumatoid Arthritis , 2012, Clinical & developmental immunology.
[35] María Martín,et al. Activities at the Universal Protein Resource (UniProt) , 2013, Nucleic Acids Res..
[36] R. Goodman,et al. The multifunctional role of the co-activator CBP in transcriptional regulation. , 1997, Recent progress in hormone research.
[37] Alessandro Sette,et al. The Immune Epitope Database 2.0 , 2009, Nucleic Acids Res..
[38] L. Stein,et al. A human functional protein interaction network and its application to cancer data analysis , 2010, Genome Biology.
[39] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[40] Kenneth H. Buetow,et al. PID: the Pathway Interaction Database , 2008, Nucleic Acids Res..
[41] S. Ing,et al. Follicular helper T cells: new insights into mechanisms of autoimmune diseases. , 2013, The Ochsner journal.
[42] L. Hood,et al. Myelin deficient mice: Expression of myelin basic protein and generation of mice with varying levels of myelin , 1987, Cell.
[43] Akiko Iwasaki,et al. Inflammasomes as mediators of immunity against influenza virus. , 2011, Trends in immunology.
[44] R. Porcher,et al. Guillain-Barré syndrome and influenza virus infection. , 2009, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.
[45] H. Hartung,et al. Guillain-Barré syndrome after exposure to influenza virus. , 2010, The Lancet. Infectious diseases.
[46] J. Lupski,et al. Dejerine–Sottas syndrome associated with point mutation in the peripheral myelin protein 22 (PMP22) gene , 1993, Nature Genetics.
[47] Jesse D. Martinez,et al. Ursodeoxycholic acid (UDCA) can inhibit deoxycholic acid (DCA)-induced apoptosis via modulation of EGFR/Raf-1/ERK signaling in human colon cancer cells. , 2004, The Journal of nutrition.
[48] M. Proschan,et al. Association between Guillain-Barré syndrome and influenza A (H1N1) 2009 monovalent inactivated vaccines in the USA: a meta-analysis , 2013, The Lancet.
[49] Peter B. McGarvey,et al. Infrastructure for the life sciences: design and implementation of the UniProt website , 2009, BMC Bioinformatics.
[50] S. Cochi,et al. The Vaccine Adverse Event Reporting System (VAERS). , 1994, Vaccine.
[51] Peter B. McGarvey,et al. A comprehensive protein-centric ID mapping service for molecular data integration , 2011, Bioinform..
[52] E. Pérez-Nadales,et al. The Ras/Raf/ERK signalling pathway drives Schwann cell dedifferentiation , 2004, The EMBO journal.
[53] P. Schmitz,et al. The spectrum of antecedent infections in Guillain-Barré syndrome , 1998, Neurology.
[54] S. Bhattacharya,et al. An essential role for p300/CBP in the cellular response to hypoxia. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[55] Thorsten Wolff,et al. Bivalent role of the phosphatidylinositol‐3‐kinase (PI3K) during influenza virus infection and host cell defence , 2006, Cellular microbiology.
[56] A. Mandelin,et al. TH-17 cells in rheumatoid arthritis , 2008, Arthritis research & therapy.
[57] B. Howard,et al. A p300/CBP-associated factor that competes with the adenoviral oncoprotein E1A , 1996, Nature.
[58] D. Mcgonagle,et al. Application of the immunological disease continuum to study autoimmune and other inflammatory events after vaccination. , 2011, Vaccine.
[59] H. Takayanagi. Osteoimmunology: shared mechanisms and crosstalk between the immune and bone systems , 2007, Nature Reviews Immunology.
[60] Lincoln Stein,et al. Reactome: a database of reactions, pathways and biological processes , 2010, Nucleic Acids Res..
[61] Robert S. Ledley,et al. The Protein Information Resource , 2003, Nucleic Acids Res..
[62] Damian Smedley,et al. BioMart Central Portal: an open database network for the biological community , 2011, Database J. Biol. Databases Curation.
[63] B. Valentinis,et al. Direct Effects of Polymyxin B on Human Dendritic Cells Maturation , 2005, Journal of Biological Chemistry.
[64] H. Lehnert,et al. Extracellular calcium-sensing receptor is functionally expressed in human artery. , 2007, American journal of physiology. Renal physiology.
[65] Y. Benjamini,et al. Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .
[66] Tao Zhang,et al. International collaboration to assess the risk of Guillain Barré Syndrome following Influenza A (H1N1) 2009 monovalent vaccines. , 2013, Vaccine.
[67] Yanli Wang,et al. A survey of across-target bioactivity results of small molecules in PubChem , 2009, Bioinform..