Transcriptional regulation by AIRE: molecular mechanisms of central tolerance
暂无分享,去创建一个
[1] L. Peltonen,et al. Promiscuous gene expression in thymic epithelial cells is regulated at multiple levels , 2005, The Journal of experimental medicine.
[2] A. West,et al. Autoimmune regulator induced changes in the gene expression profile of human monocyte-dendritic cell-lineage. , 2004, Molecular immunology.
[3] N. Shimizu,et al. Mitogen-activated protein kinase pathway controls autoimmune regulator (AIRE) gene expression in granulo-monocyte colony stimulating factor (GM-CSF)-stimulated myelomonocytic leukemia OTC-4 cells. , 2005, Immunology letters.
[4] L. Peltonen,et al. Critical immunological pathways are downregulated in APECED patient dendritic cells , 2008, Journal of Molecular Medicine.
[5] J. Perheentupa. Autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy. , 2006, The Journal of clinical endocrinology and metabolism.
[6] M. Matsumoto. Transcriptional regulation in thymic epithelial cells for the establishment of self tolerance , 2007, Archivum Immunologiae et Therapiae Experimentalis.
[7] J. She,et al. Mapping DNA-binding domains of the autoimmune regulator protein. , 2005, Biochemical and biophysical research communications.
[8] G. Anderson,et al. Generating intrathymic microenvironments to establish T-cell tolerance , 2007, Nature Reviews Immunology.
[9] Mark S. Anderson,et al. Spontaneous autoimmunity prevented by thymic expression of a single self-antigen , 2006, The Journal of experimental medicine.
[10] T. Kouzarides. Chromatin Modifications and Their Function , 2007, Cell.
[11] Ana Pombo,et al. Functional organisation of the genome during interphase. , 2007, Current opinion in genetics & development.
[12] Li Wu,et al. Developmental pathway of CD4+CD8− medullary thymocytes during mouse ontogeny and its defect in Aire−/− mice , 2007, Proceedings of the National Academy of Sciences.
[13] P. Peterson,et al. The autoimmune regulator PHD finger binds to non-methylated histone H3K4 to activate gene expression , 2008, EMBO Reports.
[14] P. Peterson,et al. Subcellular Localization of the Autoimmune Regulator Protein , 2001, The Journal of Biological Chemistry.
[15] L. Peltonen,et al. Aire deficient mice develop multiple features of APECED phenotype and show altered immune response. , 2002, Human molecular genetics.
[16] M. Halonen,et al. Functional analysis of SAND mutations in AIRE supports dominant inheritance of the G228W mutation , 2005, Human mutation.
[17] L. Peltonen,et al. Gene Dosage–limiting Role of Aire in Thymic Expression, Clonal Deletion, and Organ-specific Autoimmunity , 2004, The Journal of experimental medicine.
[18] N. Shimizu,et al. AIRE Functions As an E 3 Ubiquitin Ligase , 2004 .
[19] L. Peltonen,et al. Autoimmune polyendocrinopathy syndrome type 1 (APS1) and AIRE gene: new views on molecular basis of autoimmunity. , 2005, Journal of autoimmunity.
[20] C. Marcocci,et al. A novel mutation of the autoimmune regulator gene in an Italian kindred with autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy, acting in a dominant fashion and strongly cosegregating with hypothyroid autoimmune thyroiditis. , 2001, The Journal of clinical endocrinology and metabolism.
[21] C. Benoist,et al. B cells are required for Aire-deficient mice to develop multi-organ autoinflammation: A therapeutic approach for APECED patients , 2008, Proceedings of the National Academy of Sciences.
[22] S. Akira,et al. Essential Role of IκB Kinase α in Thymic Organogenesis Required for the Establishment of Self-Tolerance1 , 2006, The Journal of Immunology.
[23] H. Scott,et al. Sequential phases in the development of Aire‐expressing medullary thymic epithelial cells involve distinct cellular input , 2008, European Journal of Immunology.
[24] A. Cao,et al. Role of PHD fingers and COOH-terminal 30 amino acids in AIRE transactivation activity. , 2008, Molecular immunology.
[25] E. Palmer,et al. Normal Thymic Architecture and Negative Selection Are Associated with Aire Expression, the Gene Defective in the Autoimmune-Polyendocrinopathy-Candidiasis-Ectodermal Dystrophy (APECED)1 , 2000, The Journal of Immunology.
[26] Xinbin Chen,et al. The proline-rich domain in p63 is necessary for the transcriptional and apoptosis-inducing activities of TAp63 , 2008, Oncogene.
[27] C. Hughes,et al. Of Mice and Not Men: Differences between Mouse and Human Immunology , 2004, The Journal of Immunology.
[28] M. Flajnik,et al. Evolutionarily conserved and divergent regions of the Autoimmune Regulator (Aire) gene: a comparative analysis , 2008, Immunogenetics.
[29] Mark S. Anderson,et al. Effector Mechanisms of the Autoimmune Syndrome in the Murine Model of Autoimmune Polyglandular Syndrome Type 11 , 2008, The Journal of Immunology.
[30] Michael J. Bevan,et al. Central Tolerance to Tissue-specific Antigens Mediated by Direct and Indirect Antigen Presentation , 2004, The Journal of experimental medicine.
[31] L. Peltonen,et al. The Autoimmune Regulator Directly Controls the Expression of Genes Critical for Thymic Epithelial Function , 2007, The Journal of Immunology.
[32] L. Peltonen,et al. Localization of the APECED protein in distinct nuclear structures. , 1999, Human molecular genetics.
[33] C. Ware,et al. NF-kappaB2 is required for the establishment of central tolerance through an Aire-dependent pathway. , 2006, The Journal of clinical investigation.
[34] L. Klein,et al. Selection of Foxp3+ regulatory T cells specific for self antigen expressed and presented by Aire+ medullary thymic epithelial cells , 2007, Nature Immunology.
[35] H. Takayanagi,et al. The cytokine RANKL produced by positively selected thymocytes fosters medullary thymic epithelial cells that express autoimmune regulator. , 2008, Immunity.
[36] B. Kyewski,et al. Promiscuous gene expression and the developmental dynamics of medullary thymic epithelial cells , 2007, European journal of immunology.
[37] M. Vihinen,et al. APECED‐causing mutations in AIRE reveal the functional domains of the protein , 2004, Human mutation.
[38] W. Reith,et al. Autoantigen-specific interactions with CD4+ thymocytes control mature medullary thymic epithelial cell cellularity. , 2008, Immunity.
[39] S. Jameson,et al. Central tolerance: learning self-control in the thymus , 2005, Nature Reviews Immunology.
[40] L. Peltonen,et al. Aire regulates negative selection of organ-specific T cells , 2003, Nature Immunology.
[41] Kazuhiko Yamamoto,et al. Aire downregulates multiple molecules that have contradicting immune-enhancing and immune-suppressive functions. , 2004, Biochemical and biophysical research communications.
[42] R. Uibo,et al. Interferon autoantibodies associated with AIRE deficiency decrease the expression of IFN-stimulated genes , 2008, Blood.
[43] S. Antonarakis,et al. Isolation and characterization of the mouse Aire gene. , 1999, Biochemical and biophysical research communications.
[44] S. Galande,et al. The third dimension of gene regulation: organization of dynamic chromatin loopscape by SATB1. , 2007, Current opinion in genetics & development.
[45] Catherine L. Worth,et al. AIRE's CARD Revealed, a New Structure for Central Tolerance Provokes Transcriptional Plasticity* , 2008, Journal of Biological Chemistry.
[46] H. Kangas,et al. The monopartite nuclear localization signal of autoimmune regulator mediates its nuclear import and interaction with multiple importin α molecules , 2006, The FEBS journal.
[47] P. Peterson,et al. Hypothetical review: thymic aberrations and type‐I interferons; attempts to deduce autoimmunizing mechanisms from unexpected clues in monogenic and paraneoplastic syndromes , 2008, Clinical and experimental immunology.
[48] T. Mikkelsen,et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells , 2007, Nature.
[49] D. Hanahan,et al. Peripheral-antigen-expressing cells in thymic medulla: factors in self-tolerance and autoimmunity. , 1998, Current opinion in immunology.
[50] C. Benoist,et al. AIRE and APECED: molecular insights into an autoimmune disease , 2005, Immunological reviews.
[51] L. Peltonen,et al. Autoimmune polyendocrine syndrome type 1 and NALP5, a parathyroid autoantigen. , 2008, The New England journal of medicine.
[52] E. Kalkhoven,et al. CBP and p300: HATs for different occasions. , 2004, Biochemical pharmacology.
[53] Mark S. Anderson,et al. The cellular mechanism of Aire control of T cell tolerance. , 2005, Immunity.
[54] K. Nakayama,et al. Alteration of intra-pancreatic target-organ specificity by abrogation of Aire in NOD mice. , 2006, The Journal of clinical investigation.
[55] Atif Shahab,et al. Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells. , 2007, Cell stem cell.
[56] C. Benoist,et al. Self-reactivity in thymic double-positive cells commits cells to a CD8αα lineage with characteristics of innate immune cells , 2004, Nature Immunology.
[57] T. Nomura,et al. NF-κB-Inducing Kinase Establishes Self-Tolerance in a Thymic Stroma-Dependent Manner1 , 2004, The Journal of Immunology.
[58] C. Benoist,et al. Chromosomal clustering of genes controlled by the aire transcription factor. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[59] C. Benoist,et al. Ectopic expression of peripheral-tissue antigens in the thymic epithelium: Probabilistic, monoallelic, misinitiated , 2008, Proceedings of the National Academy of Sciences.
[60] T. Gibson,et al. The SAND domain structure defines a novel DNA-binding fold in transcriptional regulation , 2001, Nature Structural Biology.
[61] T. Misteli. Beyond the Sequence: Cellular Organization of Genome Function , 2011 .
[62] R. Savkur,et al. The coactivator LXXLL nuclear receptor recognition motif. , 2004, The journal of peptide research : official journal of the American Peptide Society.
[63] N. Shimizu,et al. AIRE Functions As an E3 Ubiquitin Ligase , 2004, The Journal of experimental medicine.
[64] S. Turley,et al. Peripheral antigen display by lymph node stroma promotes T cell tolerance to intestinal self , 2007, Nature Immunology.
[65] N. Shimizu,et al. Expression of AIRE gene in peripheral monocyte/dendritic cell lineage. , 2002, Immunology letters.
[66] B. Kyewski,et al. Promiscuous gene expression patterns in single medullary thymic epithelial cells argue for a stochastic mechanism , 2008, Proceedings of the National Academy of Sciences.
[67] Alfonso Valencia,et al. Are promyelocytic leukaemia protein nuclear bodies a scaffold for caspase-2 programmed cell death? , 2007, Trends in biochemical sciences.
[68] T. Nomura,et al. Development of Autoimmunity against Transcriptionally Unrepressed Target Antigen in the Thymus of Aire-Deficient Mice1 , 2005, The Journal of Immunology.
[69] M J Sternberg,et al. PML bodies associate specifically with the MHC gene cluster in interphase nuclei. , 2001, Journal of cell science.
[70] S. Antonarakis,et al. Autoimmune regulator is expressed in the cells regulating immune tolerance in thymus medulla. , 1999, Biochemical and biophysical research communications.
[71] D. Gray,et al. Developmental kinetics, turnover, and stimulatory capacity of thymic epithelial cells. , 2006, Blood.
[72] Mark S. Anderson,et al. Apoptosis in Spermatogenesis Expression of Aire and the Early Wave of , 2022 .
[73] J. Chiche,et al. Sp110 Localizes to the PML-Sp100 Nuclear Body and May Function as a Nuclear Hormone Receptor Transcriptional Coactivator , 2000, Molecular and Cellular Biology.
[74] Leena Peltonen,et al. Systematic mutagenesis of the functional domains of AIRE reveals their role in intracellular targeting. , 2002, Human molecular genetics.
[75] G. Gillard,et al. Features of Medullary Thymic Epithelium Implicate Postnatal Development in Maintaining Epithelial Heterogeneity and Tissue-Restricted Antigen Expression1 , 2006, The Journal of Immunology.
[76] H. Takayanagi,et al. The tumor necrosis factor family receptors RANK and CD40 cooperatively establish the thymic medullary microenvironment and self-tolerance. , 2008, Immunity.
[77] N. Shimizu,et al. Subcellular Expression of Autoimmune Regulator Is Organized in a Spatiotemporal Manner* , 2004, Journal of Biological Chemistry.
[78] K. Jones,et al. The multi-tasking P-TEFb complex. , 2008, Current opinion in cell biology.
[79] Y. Takahama,et al. Journey through the thymus: stromal guides for T-cell development and selection , 2006, Nature Reviews Immunology.
[80] A. Davoodi-Semiromi,et al. The Autoimmune Regulator (AIRE) Is a DNA-binding Protein* , 2001, The Journal of Biological Chemistry.
[81] A. Miettinen,et al. Does the deficiency of Aire in mice really resemble human APECED? , 2007, Nature Reviews Immunology.
[82] Li Wu,et al. A Specific Anti-Aire Antibody Reveals Aire Expression Is Restricted to Medullary Thymic Epithelial Cells and Not Expressed in Periphery1 , 2008, The Journal of Immunology.
[83] L. Peltonen,et al. Mutations in the AIRE gene: effects on subcellular location and transactivation function of the autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy protein. , 2000, American journal of human genetics.
[84] Mark S. Anderson,et al. What's new in the Aire? , 2007, Trends in immunology.
[85] G. Gillard,et al. Contrasting models of promiscuous gene expression by thymic epithelium , 2005, The Journal of experimental medicine.
[86] S. Antonarakis,et al. The Autoimmune Regulator Protein Has Transcriptional Transactivating Properties and Interacts with the Common Coactivator CREB-binding Protein* , 2000, The Journal of Biological Chemistry.
[87] N. Minato,et al. Medullary thymic epithelial cells expressing Aire represent a unique lineage derived from cells expressing claudin , 2007, Nature Immunology.
[88] P. Peterson,et al. Anti-Interferon Autoantibodies in Autoimmune Polyendocrinopathy Syndrome Type 1 , 2006, PLoS medicine.
[89] X. Ke,et al. An IRF8-binding promoter variant and AIRE control CHRNA1 promiscuous expression in thymus , 2007, Nature.
[90] R. Getts,et al. DNA-PK-dependent binding of DNA ends to plasmids containing nuclear matrix attachment region DNA sequences: evidence for assembly of a repair complex. , 2002, Nucleic acids research.
[91] A. Rosenwald,et al. Deficiency of the autoimmune regulator AIRE in thymomas is insufficient to elicit autoimmune polyendocrinopathy syndrome type 1 (APS‐1) , 2007, The Journal of pathology.
[92] S. Salzberg,et al. The Transcriptional Landscape of the Mammalian Genome , 2005, Science.
[93] M. Lipinski,et al. Chromatin domains and regulation of transcription. , 2007, Journal of molecular biology.
[94] H. Sasaki,et al. Expression of AIRE in thymocytes and peripheral lymphocytes , 2008, Autoimmunity.
[95] S. Antonarakis,et al. RNA and protein expression of the murine autoimmune regulator gene (Aire) in normal, RelB‐deficient and in NOD mouse , 2000, European journal of immunology.
[96] P. Peterson,et al. DNA-PK contributes to the phosphorylation of AIRE: Importance in transcriptional activity , 2008, Biochimica et biophysica acta.
[97] L. Peltonen,et al. Aire-Dependent Alterations in Medullary Thymic Epithelium Indicate a Role for Aire in Thymic Epithelial Differentiation1 , 2007, The Journal of Immunology.
[98] A. Dejean,et al. Functional interaction between PML and SATB1 regulates chromatin-loop architecture and transcription of the MHC class I locus , 2007, Nature Cell Biology.
[99] A. Marx,et al. Cooperative activation of transcription by autoimmune regulator AIRE and CBP. , 2005, Biochemical and biophysical research communications.
[100] Or Gozani,et al. Aire employs a histone-binding module to mediate immunological tolerance, linking chromatin regulation with organ-specific autoimmunity , 2008, Proceedings of the National Academy of Sciences.
[101] Mark S. Anderson,et al. Modifier loci condition autoimmunity provoked by Aire deficiency , 2005, The Journal of experimental medicine.
[102] Mads Kærn,et al. Noise in eukaryotic gene expression , 2003, Nature.
[103] L. Klein,et al. A central role for central tolerance. , 2006, Annual review of immunology.
[104] C. Benoist,et al. Proliferative arrest and rapid turnover of thymic epithelial cells expressing Aire , 2007, The Journal of experimental medicine.
[105] Naděžda Brdičková,et al. AIRE Recruits P-TEFb for Transcriptional Elongation of Target Genes in Medullary Thymic Epithelial Cells , 2007, Molecular and Cellular Biology.
[106] Howard Y. Chang,et al. Deletional Tolerance Mediated by Extrathymic Aire-Expressing Cells , 2008, Science.
[107] M. Juan,et al. Insulin alleles and autoimmune regulator (AIRE) gene expression both influence insulin expression in the thymus. , 2005, Journal of autoimmunity.
[108] D. Tranchina,et al. Stochastic mRNA Synthesis in Mammalian Cells , 2006, PLoS biology.
[109] P. Peterson,et al. Modulation of Aire regulates the expression of tissue-restricted antigens , 2008, Molecular immunology.
[110] Howard Y. Chang,et al. Mechanisms of an autoimmunity syndrome in mice caused by a dominant mutation in Aire. , 2008, The Journal of clinical investigation.
[111] M. Bottomley,et al. Crystal structure and nuclear magnetic resonance analyses of the SAND domain from glucocorticoid modulatory element binding protein-1 reveals deoxyribonucleic acid and zinc binding regions. , 2003, Molecular endocrinology.
[112] B. Brors,et al. Medullary Epithelial Cells of the Human Thymus Express a Highly Diverse Selection of Tissue-specific Genes Colocalized in Chromosomal Clusters , 2004, The Journal of experimental medicine.
[113] R. Melamed,et al. The variable immunological self: Genetic variation and nongenetic noise in Aire-regulated transcription , 2008, Proceedings of the National Academy of Sciences.
[114] Pamela A. Silver,et al. Coupling and coordination in gene expression processes: a systems biology view , 2008, Nature Reviews Genetics.
[115] J. Penninger,et al. RANK signals from CD4+3− inducer cells regulate development of Aire-expressing epithelial cells in the thymic medulla , 2007, The Journal of Experimental Medicine.
[116] E. O’Shea,et al. Noise in protein expression scales with natural protein abundance , 2006, Nature Genetics.
[117] Rosa Bernardi,et al. Structure, dynamics and functions of promyelocytic leukaemia nuclear bodies , 2007, Nature Reviews Molecular Cell Biology.
[118] L. Peltonen,et al. An autoimmune disease, APECED, caused by mutations in a novel gene featuring two PHD-type zinc-finger domains , 1997, Nature Genetics.
[119] Shinsei Minoshima,et al. Positional cloning of the APECED gene , 1997, Nature Genetics.
[120] B. Simon,et al. NMR Structure of the First PHD Finger of Autoimmune Regulator Protein (AIRE1) , 2005, Journal of Biological Chemistry.
[121] J. Seeler,et al. Functional interaction of AIRE with PIAS1 in transcriptional regulation. , 2008, Molecular immunology.
[122] C. Benoist,et al. A decade of AIRE , 2007, Nature Reviews Immunology.
[123] D. Patel,et al. AIRE recruits multiple transcriptional components to specific genomic regions through tethering to nuclear matrix. , 2006, Molecular immunology.
[124] Morgan Huse,et al. The Death Domain Superfamily in Intracellular Signaling of Apoptosis and Inflammation , 2007 .
[125] J. Mellor. It Takes a PHD to Read the Histone Code , 2006, Cell.
[126] H. Lehrach,et al. AIRE encodes a nuclear protein co-localizing with cytoskeletal filaments: altered sub-cellular distribution of mutants lacking the PHD zinc fingers. , 1999, Human molecular genetics.
[127] L. Klein,et al. Promiscuous gene expression in medullary thymic epithelial cells mirrors the peripheral self , 2001, Nature Immunology.
[128] Mark S. Anderson,et al. Projection of an Immunological Self Shadow Within the Thymus by the Aire Protein , 2002, Science.
[129] L. Peltonen,et al. Aire-deficient mice develop hematopoetic irregularities and marginal zone B-cell lymphoma. , 2006, Blood.
[130] C. Benoist,et al. Loss of Aire-dependent thymic expression of a peripheral tissue antigen renders it a target of autoimmunity , 2007, Proceedings of the National Academy of Sciences.
[131] S. Maeda,et al. Dependence of Self-Tolerance on TRAF6-Directed Development of Thymic Stroma , 2005, Science.
[132] S. Yokoyama,et al. NMR Structure of the N-terminal Domain of SUMO Ligase PIAS1 and Its Interaction with Tumor Suppressor p53 and A/T-rich DNA Oligomers* , 2004, Journal of Biological Chemistry.
[133] A. Farr,et al. Alterations of the Medullary Epithelial Compartment in the Aire-Deficient Thymus: Implications for Programs of Thymic Epithelial Differentiation12 , 2008, The Journal of Immunology.
[134] Alexander van Oudenaarden,et al. Stochastic Gene Expression: from Single Molecules to the Proteome This Review Comes from a Themed Issue on Chromosomes and Expression Mechanisms Edited Measuring Noise Mrna Fluctuations , 2022 .
[135] L. Peltonen,et al. Increased antigen presenting cell‐mediated T cell activation in mice and patients without the autoimmune regulator , 2006, European journal of immunology.
[136] L. Peltonen,et al. Aire deficient mice do not develop the same profile of tissue-specific autoantibodies as APECED patients. , 2006, Journal of autoimmunity.