Sensorimotor Coding of Vermal Granule Neurons in the Developing Mammalian Cerebellum

The vermal cerebellum is a hub of sensorimotor integration critical for postural control and locomotion, but the nature and developmental organization of afferent information to this region have remained poorly understood in vivo. Here, we use in vivo two-photon calcium imaging of the vermal cerebellum in awake behaving male and female mice to record granule neuron responses to diverse sensorimotor cues targeting visual, auditory, somatosensory, and motor domains. Use of an activity-independent marker revealed that approximately half (54%) of vermal granule neurons were activated during these recordings. A multikernel linear model distinguished the relative influences of external stimuli and co-occurring movements on neural responses, indicating that, among the subset of activated granule neurons, locomotion (44%–56%) and facial air puffs (50%) were more commonly and reliably encoded than visual (31%–32%) and auditory (19%–28%) stimuli. Strikingly, we also uncover populations of granule neurons that respond differentially to voluntary and forced locomotion, whereas other granule neurons in the same region respond similarly to locomotion in both conditions. Finally, by combining two-photon calcium imaging with birth date labeling of granule neurons via in vivo electroporation, we find that early- and late-born granule neurons convey similarly diverse sensorimotor information to spatially distinct regions of the molecular layer. Collectively, our findings elucidate the nature and developmental organization of sensorimotor information in vermal granule neurons of the developing mammalian brain. SIGNIFICANCE STATEMENT Cerebellar granule neurons comprise over half the neurons in the brain, and their coding properties have been the subject of theoretical and experimental interest for over a half-century. In this study, we directly test long-held theories about encoding of sensorimotor stimuli in the cerebellum and compare the in vivo coding properties of early- and late-born granule neurons. Strikingly, we identify populations of granule neurons that differentially encode voluntary and forced locomotion and find that, although the birth order of granule neurons specifies the positioning of their parallel fiber axons, both early- and late-born granule neurons convey a functionally diverse sensorimotor code. These findings constitute important conceptual advances in understanding the principles underlying cerebellar circuit development and function.

[1]  T. Holy,et al.  Sensory Experience Remodels Genome Architecture in Neural Circuit to Drive Motor Learning , 2019, Nature.

[2]  Surya Ganguli,et al.  Shared Cortex-Cerebellum Dynamics in the Execution and Learning of a Motor Task , 2019, Cell.

[3]  Laura D. Knogler,et al.  Motor context dominates output from purkinje cell functional regions during reflexive visuomotor behaviours , 2018, bioRxiv.

[4]  Andrei Khilkevich,et al.  Cerebellar implementation of movement sequences through feedback , 2018, eLife.

[5]  Henrik Jörntell,et al.  Correction to: Cerebellar Modules and Their Role as Operational Cerebellar Processing Units: A Consensus paper , 2018, The Cerebellum.

[6]  Henrik Jörntell,et al.  Cerebellar Modules and Their Role as Operational Cerebellar Processing Units , 2018, The Cerebellum.

[7]  A. Bonni,et al.  RNF8/UBC13 ubiquitin signaling suppresses synapse formation in the mammalian brain , 2017, Nature Communications.

[8]  Abigail L Person,et al.  Morphological Constraints on Cerebellar Granule Cell Combinatorial Diversity , 2017, The Journal of Neuroscience.

[9]  Ruben Portugues,et al.  Sensorimotor Representations in Cerebellar Granule Cells in Larval Zebrafish Are Dense, Spatially Organized, and Non-temporally Patterned , 2017, Current Biology.

[10]  Ben Deverett,et al.  Cerebellar granule cells acquire a widespread predictive feedback signal during motor learning , 2017, Nature Neuroscience.

[11]  L. Luo,et al.  Cerebellar granule cells encode the expectation of reward , 2017, Nature.

[12]  E. Pnevmatikakis,et al.  NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data , 2017, Journal of Neuroscience Methods.

[13]  Dominique L. Pritchett,et al.  Locomotor activity modulates associative learning in mouse cerebellum , 2017, Nature Neuroscience.

[14]  Shane A. Heiney,et al.  Chromatin remodeling inactivates activity genes and regulates neural coding , 2016, Science.

[15]  Timothy A. Machado,et al.  Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data , 2016, Neuron.

[16]  Michael Häusser,et al.  Multimodal sensory integration in single cerebellar granule cells in vivo , 2015, eLife.

[17]  M. Häusser,et al.  Control of cerebellar granule cell output by sensory-evoked Golgi cell inhibition , 2015, Proceedings of the National Academy of Sciences.

[18]  Stephen G Lisberger,et al.  How and why neural and motor variation are related , 2015, Current Opinion in Neurobiology.

[19]  M. Häusser,et al.  Synaptic representation of locomotion in single cerebellar granule cells , 2015, eLife.

[20]  M. Häusser,et al.  Reading out a spatiotemporal population code by imaging neighbouring parallel fibre axons in vivo , 2015, Nature Communications.

[21]  C. D. De Zeeuw,et al.  In Vivo Differences in Inputs and Spiking Between Neurons in Lobules VI/VII of Neocerebellum and Lobule X of Archaeocerebellum , 2015, The Cerebellum.

[22]  Martin T. Wiechert,et al.  Synaptic diversity enables temporal coding of coincident multi-sensory inputs in single neurons , 2015, Nature Neuroscience.

[23]  Selmaan N. Chettih,et al.  Cerebellar-Dependent Expression of Motor Learning during Eyeblink Conditioning in Head-Fixed Mice , 2014, The Journal of Neuroscience.

[24]  S. Koekkoek,et al.  Cerebellar control of gait and interlimb coordination , 2014, Brain Structure and Function.

[25]  R. Angus Silver,et al.  Network Structure within the Cerebellar Input Layer Enables Lossless Sparse Encoding , 2014, Neuron.

[26]  W. Regehr,et al.  Promoter Decommissioning by the NuRD Chromatin Remodeling Complex Triggers Synaptic Connectivity in the Mammalian Brain , 2014, Neuron.

[27]  Daniel Dombeck,et al.  Two-photon imaging of neural activity in awake mobile mice. , 2014, Cold Spring Harbor protocols.

[28]  Toru Aonishi,et al.  Detecting cells using non-negative matrix factorization on calcium imaging data , 2014, Neural Networks.

[29]  Simon X. Chen,et al.  Emergence of reproducible spatiotemporal activity during motor learning , 2014, Nature.

[30]  Arnd Roth,et al.  Structured Connectivity in Cerebellar Inhibitory Networks , 2014, Neuron.

[31]  Stefan R. Pulver,et al.  Ultra-sensitive fluorescent proteins for imaging neuronal activity , 2013, Nature.

[32]  Jessica X. Brooks,et al.  The Primate Cerebellum Selectively Encodes Unexpected Self-Motion , 2013, Current Biology.

[33]  Chris I. De Zeeuw,et al.  High Frequency Burst Firing of Granule Cells Ensures Transmission at the Parallel Fiber to Purkinje Cell Synapse at the Cost of Temporal Coding , 2013, Front. Neural Circuits.

[34]  S. Nelson,et al.  Convergence of pontine and proprioceptive streams onto multimodal cerebellar granule cells , 2013, eLife.

[35]  D. Tank,et al.  Widespread State-Dependent Shifts in Cerebellar Activity in Locomoting Mice , 2012, PloS one.

[36]  Stacey L. Reeber,et al.  Parasagittal compartmentation of cerebellar mossy fibers as revealed by the patterned expression of vesicular glutamate transporters VGLUT1 and VGLUT2 , 2012, Brain Structure and Function.

[37]  Peter L Strick,et al.  Cerebellar vermis is a target of projections from the motor areas in the cerebral cortex , 2011, Proceedings of the National Academy of Sciences.

[38]  C. Cepko,et al.  An Isoform-Specific SnoN1-FOXO1 Repressor Complex Controls Neuronal Morphogenesis and Positioning in the Mammalian Brain , 2011, Neuron.

[39]  Michael D Mauk,et al.  A Subtraction Mechanism of Temporal Coding in Cerebellar Cortex , 2011, The Journal of Neuroscience.

[40]  Carol A. Mason,et al.  Development of Axon-Target Specificity of Ponto-Cerebellar Afferents , 2011, PLoS biology.

[41]  Michael Häusser,et al.  Dendritic spikes mediate negative synaptic gain control in cerebellar Purkinje cells , 2010, Proceedings of the National Academy of Sciences.

[42]  Michael D Mauk,et al.  Temporal patterns of inputs to cerebellum necessary and sufficient for trace eyelid conditioning. , 2010, Journal of neurophysiology.

[43]  Nathaniel B Sawtell,et al.  Multimodal Integration in Granule Cells as a Basis for Associative Plasticity and Sensory Prediction in a Cerebellum-like Circuit , 2010, Neuron.

[44]  Sreekanth H. Chalasani,et al.  Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators , 2009, Nature Methods.

[45]  T. Margrie,et al.  Sensory representations in cerebellar granule cells , 2009, Current Opinion in Neurobiology.

[46]  Henrik Jörntell,et al.  Sensory transmission in cerebellar granule cells relies on similarly coded mossy fiber inputs , 2009, Proceedings of the National Academy of Sciences.

[47]  Jeremy D. Schmahmann,et al.  Functional topography in the human cerebellum: A meta-analysis of neuroimaging studies , 2009, NeuroImage.

[48]  Henrik Jörntell,et al.  Synaptic Integration in Cerebellar Granule Cells , 2008, The Cerebellum.

[49]  Simon Carlile,et al.  Virtual Adult Ears Reveal the Roles of Acoustical Factors and Experience in Auditory Space Map Development , 2008, The Journal of Neuroscience.

[50]  D. Angelaki,et al.  Vestibular system: the many facets of a multimodal sense. , 2008, Annual review of neuroscience.

[51]  L. Luo,et al.  Timing Neurogenesis and Differentiation: Insights from Quantitative Clonal Analyses of Cerebellar Granule Cells , 2008, The Journal of Neuroscience.

[52]  Henrik Jörntell,et al.  Properties of Somatosensory Synaptic Integration in Cerebellar Granule Cells In Vivo , 2006, The Journal of Neuroscience.

[53]  J. Eian,et al.  Kinematic and non-kinematic signals transmitted to the cat cerebellum during passive treadmill stepping , 2005, Experimental Brain Research.

[54]  L. Luo,et al.  Mosaic Analysis with Double Markers in Mice , 2005, Cell.

[55]  D. Buonomano,et al.  The neural basis of temporal processing. , 2004, Annual review of neuroscience.

[56]  Jefferson E. Roy,et al.  Dissociating Self-Generated from Passively Applied Head Motion: Neural Mechanisms in the Vestibular Nuclei , 2004, The Journal of Neuroscience.

[57]  P. Strick,et al.  Cerebellar Loops with Motor Cortex and Prefrontal Cortex of a Nonhuman Primate , 2003, The Journal of Neuroscience.

[58]  L. Reichardt,et al.  Cre‐mediated recombination in rhombic lip derivatives , 2002, Genesis.

[59]  Jefferson E. Roy,et al.  Selective Processing of Vestibular Reafference during Self-Generated Head Motion , 2001, The Journal of Neuroscience.

[60]  Javier F. Medina,et al.  Timing Mechanisms in the Cerebellum: Testing Predictions of a Large-Scale Computer Simulation , 2000, The Journal of Neuroscience.

[61]  W. T. Thach,et al.  Posterior vermal split syndrome , 1998, Annals of neurology.

[62]  Mnh,et al.  Histologie du Système Nerveux de Lʼhomme et des Vertébrés , 1998 .

[63]  C. Mason,et al.  Developmental regulation of mossy fiber afferent interactions with target granule cells. , 1998, Developmental biology.

[64]  J. Altman,et al.  Development of the Cerebellar System: In Relation to Its Evolution, Structure, and Functions , 1996 .

[65]  R. Hawkes,et al.  Topography of purkinje cell compartments and mossy fiber terminal fields in lobules ii and iii of the rat cerebellar cortex: Spinocerebellar and cuneocerebellar projections , 1994, Neuroscience.

[66]  Juha Päällysaho,et al.  Brainstem mossy fiber projections to lobules VIa, VIb,c, VII and VIII of the cerebellar vermis in the rat , 1991, Neuroscience Research.

[67]  D. Armstrong The supraspinal control of mammalian locomotion. , 1988, The Journal of physiology.

[68]  J. Altman,et al.  Development of the precerebellar nuclei in the rat: III. The posterior precerebellar extramural migratory stream and the lateral reticular and external cuneate nuclei , 1987, The Journal of comparative neurology.

[69]  J. Altman,et al.  Development of the precerebellar nuclei in the rat: IV. The anterior precerebellar extramural migratory stream and the nucleus reticularis tegmenti pontis and the basal pontine gray , 1987, The Journal of comparative neurology.

[70]  D. Armstrong Supraspinal contributions to the initiation and control of locomotion in the cat , 1986, Progress in Neurobiology.

[71]  J. F. Stein,et al.  Role of the cerebellum in the visual guidance of movement , 1986, Nature.

[72]  Rosa H. Huang,et al.  Projections from the cochlear nucleus to the cerebellum , 1982, Brain Research.

[73]  M. Wiesendanger,et al.  The corticopontine system in the rat. I. Mapping of corticopontine neurons , 1982, The Journal of comparative neurology.

[74]  M. Wiesendanger,et al.  The corticopontine system in the rat. II. The projection pattern , 1982, The Journal of comparative neurology.

[75]  M. Matsushita,et al.  Spinocerebellar projections to the vermis of the posterior lobe and the paramedian lobule in the cat, as studied by retrograde transport of horseradish peroxidase , 1980, The Journal of comparative neurology.

[76]  Y. Hosoya,et al.  Anatomical organization of the spinocerebellar system in the cat, as studied by retrograde transport of horseradish peroxidase , 1979, The Journal of comparative neurology.

[77]  P. Zangger,et al.  The activity of cells of nucleus reticularis tegmenti pontis during spontaneous locomotion in the decorticate cat , 1978, Neuroscience Letters.

[78]  M. L. Shik,et al.  Neurophysiology of locomotor automatism. , 1976, Physiological reviews.

[79]  L. Aitkin,et al.  Responses of single units in cerebellar vermis of the cat to monaural and binaural stimuli. , 1975, Journal of neurophysiology.

[80]  J. Altman,et al.  Postnatal development of the cerebellar cortex in the rat. III. Maturation of the components of the granular layer , 1972, The Journal of comparative neurology.

[81]  R. Snider,et al.  RECEIVING AREAS OF THE TACTILE, AUDITORY, AND VISUAL SYSTEMS IN THE CEREBELLUM , 1944 .

[82]  Amy J Bastian,et al.  Role of the cerebellum in the control and adaptation of gait in health and disease. , 2004, Progress in brain research.

[83]  Peter Dayan,et al.  Theoretical Neuroscience: Computational and Mathematical Modeling of Neural Systems , 2001 .

[84]  M. Glickstein,et al.  Mossy-fibre sensory input to the cerebellum. , 1997, Progress in brain research.

[85]  J. Houk,et al.  Movement-related inputs to intermediate cerebellum of the monkey. , 1993, Journal of neurophysiology.

[86]  K W Ashwell,et al.  Ontogeny of afferents to the fetal rat cerebellum. , 1992, Acta anatomica.

[87]  O. I. Fukson,et al.  Recordings of neurones of the dorsal spinocerebellar tract during evoked locomotion. , 1972, Brain research.

[88]  Eero P. Simoncelli,et al.  To appear in: The New Cognitive Neurosciences, 3rd edition Editor: M. Gazzaniga. MIT Press, 2004. Characterization of Neural Responses with Stochastic Stimuli , 2022 .