Molecular oxygen as a probe molecule in EPR spin-labeling studies of membrane structure and dynamics

Molecular oxygen (O2) is the perfect probe molecule for membrane studies carried out using the saturation recovery EPR technique. O2 is a small, paramagnetic, hydrophobic enough molecule that easily partitions into a membrane's different phases and domains. In membrane studies, the saturation recovery EPR method requires two paramagnetic probes: a lipid-analog nitroxide spin label and an oxygen molecule. The experimentally derived parameters of this method are the spin-lattice relaxation times (T 1s) of spin labels and rates of bimolecular collisions between O2 and the nitroxide fragment. Thanks to the long T 1 of lipid spin labels (from 1 to 10 μs), the approach is very sensitive to changes of the local (around the nitroxide fragment) O2 diffusion-concentration product. Small variations in the lipid packing affect O2 solubility and O2 diffusion, which can be detected by the shortening of T 1 of spin labels. Using O2 as a probe molecule and a different lipid spin label inserted into specific phases of the membrane and membrane domains allows data about the lateral arrangement of lipid membranes to be obtained. Moreover, using a lipid spin label with the nitroxide fragment attached to its head group or a hydrocarbon chain at different positions also enables data about molecular dynamics and structure at different membrane depths to be obtained. Thus, the method can be used to investigate not only the lateral organization of the membrane (i.e., the presence of membrane domains and phases), but also the depth-dependent membrane structure and dynamics, and, hence, the membrane properties in three dimensions.

[1]  W. Subczynski,et al.  Factors Determining Barrier Properties to Oxygen Transport Across Model and Cell Plasma Membranes Based on EPR Spin-Label Oximetry , 2021, Applied Magnetic Resonance.

[2]  M. E. Gedik,et al.  Photodynamic Therapy—Current Limitations and Novel Approaches , 2021, Frontiers in Chemistry.

[3]  S. Eaton,et al.  EPR Spectra and Electron Spin Relaxation of O2 , 2021, Applied Magnetic Resonance.

[4]  T. Wohland,et al.  Fluorescence strategies for mapping cell membrane dynamics and structures , 2020, APL bioengineering.

[5]  Frederick A. Heberle,et al.  Lipid Rafts: Controversies Resolved, Mysteries Remain. , 2020, Trends in cell biology.

[6]  M. Pasenkiewicz-Gierula,et al.  Formation of cholesterol Bilayer Domains Precedes Formation of Cholesterol Crystals in Membranes Made of the Major Phospholipids of Human Eye Lens Fiber Cell Plasma Membranes , 2020, Current eye research.

[7]  E. Hammond,et al.  Ultra-High Dose Rate (FLASH) Radiotherapy: Silver Bullet or Fool's Gold? , 2020, Frontiers in Oncology.

[8]  C. Ceberg,et al.  The FLASH effect depends on oxygen concentration. , 2019, The British journal of radiology.

[9]  J. Bourhis,et al.  FLASH radiotherapy International Workshop. , 2019, Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology.

[10]  J. Hendry,et al.  Biological Benefits of Ultra-high Dose Rate FLASH Radiotherapy: Sleeping Beauty Awoken. , 2019, Clinical oncology (Royal College of Radiologists (Great Britain)).

[11]  W. Subczynski,et al.  Detection of cholesterol bilayer domains in intact biological membranes: Methodology development and its application to studies of eye lens fiber cell plasma membranes , 2019, Experimental eye research.

[12]  E. Bieberich Sphingolipids and lipid rafts: Novel concepts and methods of analysis. , 2018, Chemistry and physics of lipids.

[13]  P. Jurkiewicz,et al.  Membrane Lipid Nanodomains. , 2018, Chemical reviews.

[14]  D. Marsh Molecular order and T1-relaxation, cross-relaxation in nitroxide spin labels. , 2018, Journal of magnetic resonance.

[15]  M. Pasenkiewicz-Gierula,et al.  Is the cholesterol bilayer domain a barrier to oxygen transport into the eye lens? , 2018, Biochimica et biophysica acta. Biomembranes.

[16]  K. Jaqaman,et al.  Transmembrane Pickets Connect Cyto- and Pericellular Skeletons Forming Barriers to Receptor Engagement , 2018, Cell.

[17]  J. S. Hyde,et al.  Saturation Recovery EPR Spin-Labeling Method for Quantification of Lipids in Biological Membrane Domains , 2017, Applied magnetic resonance.

[18]  Howard J Halpern,et al.  In vivo preclinical cancer and tissue engineering applications of absolute oxygen imaging using pulse EPR. , 2017, Journal of magnetic resonance.

[19]  W. Subczynski,et al.  Cholesterol Bilayer Domains in the Eye Lens Health: A Review , 2017, Cell Biochemistry and Biophysics.

[20]  W. Subczynski,et al.  Changes in the Properties and Organization of Human Lens Lipid Membranes Occurring with Age , 2017, Current eye research.

[21]  L. Tamm,et al.  NMR as a tool to investigate the structure, dynamics and function of membrane proteins , 2016, Nature Structural &Molecular Biology.

[22]  E. London,et al.  The Effect of Membrane Lipid Composition on the Formation of Lipid Ultrananodomains. , 2015, Biophysical journal.

[23]  W. Subczynski,et al.  Lipid domains in intact fiber-cell plasma membranes isolated from cortical and nuclear regions of human eye lenses of donors from different age groups. , 2015, Experimental eye research.

[24]  Howard J Halpern,et al.  In Vivo pO2 Imaging of Tumors: Oxymetry with Very Low-Frequency Electron Paramagnetic Resonance. , 2015, Methods in enzymology.

[25]  W. Subczynski,et al.  Properties of membranes derived from the total lipids extracted from clear and cataractous lenses of 61–70-year-old human donors , 2014, European Biophysics Journal.

[26]  J. S. Hyde,et al.  Spin-label W-band EPR with Seven-Loop–Six-Gap Resonator: Application to Lens Membranes Derived from Eyes of a Single Donor , 2014, Applied magnetic resonance.

[27]  W. Subczynski,et al.  Lipid-protein interactions in plasma membranes of fiber cells isolated from the human eye lens. , 2014, Experimental eye research.

[28]  W. Subczynski,et al.  Formation of cholesterol bilayer domains precedes formation of cholesterol crystals in cholesterol/dimyristoylphosphatidylcholine membranes: EPR and DSC studies. , 2013, The journal of physical chemistry. B.

[29]  W. Subczynski,et al.  Properties of membranes derived from the total lipids extracted from the human lens cortex and nucleus. , 2013, Biochimica et biophysica acta.

[30]  J. S. Hyde,et al.  Using spin-label W-band EPR to study membrane fluidity profiles in samples of small volume. , 2013, Journal of magnetic resonance.

[31]  W. Subczynski,et al.  Properties of fiber cell plasma membranes isolated from the cortex and nucleus of the porcine eye lens. , 2012, Experimental eye research.

[32]  M. Pasenkiewicz-Gierula,et al.  Saturation with cholesterol increases vertical order and smoothes the surface of the phosphatidylcholine bilayer: a molecular simulation study. , 2012, Biochimica et biophysica acta.

[33]  W. Subczynski,et al.  Functions of Cholesterol and the Cholesterol Bilayer Domain Specific to the Fiber-Cell Plasma Membrane of the Eye Lens , 2011, The Journal of Membrane Biology.

[34]  W. Subczynski,et al.  Using spin-label electron paramagnetic resonance (EPR) to discriminate and characterize the cholesterol bilayer domain. , 2011, Chemistry and physics of lipids.

[35]  P. Schwille,et al.  Fluorescence techniques to study lipid dynamics. , 2011, Cold Spring Harbor perspectives in biology.

[36]  Akihiro Kusumi,et al.  Hierarchical mesoscale domain organization of the plasma membrane. , 2011, Trends in biochemical sciences.

[37]  J. Hyde,et al.  Membrane fluidity profiles as deduced by saturation-recovery EPR measurements of spin-lattice relaxation times of spin labels. , 2011, Journal of magnetic resonance.

[38]  J. S. Hyde,et al.  Spin-label saturation-recovery EPR at W-band: applications to eye lens lipid membranes. , 2011, Journal of magnetic resonance.

[39]  P. Sens,et al.  Eye lens membrane junctional microdomains: a comparison between healthy and pathological cases , 2011 .

[40]  W. Subczynski,et al.  Phase-separation and domain-formation in cholesterol-sphingomyelin mixture: pulse-EPR oxygen probing. , 2011, Biophysical journal.

[41]  C. Kieda,et al.  Why is the partial oxygen pressure of human tissues a crucial parameter? Small molecules and hypoxia , 2011, Journal of cellular and molecular medicine.

[42]  S. Bassnett,et al.  Biological glass: structural determinants of eye lens transparency , 2011, Philosophical Transactions of the Royal Society B: Biological Sciences.

[43]  J. S. Hyde,et al.  Spin-label oximetry at Q- and W-band. , 2011, Journal of magnetic resonance.

[44]  W. Subczynski,et al.  The immiscible cholesterol bilayer domain exists as an integral part of phospholipid bilayer membranes. , 2011, Biochimica et biophysica acta.

[45]  T. Unruh,et al.  Molecular mechanism of long-range diffusion in phospholipid membranes studied by quasielastic neutron scattering. , 2010, Journal of the American Chemical Society.

[46]  W. Subczynski,et al.  Studying lipid organization in biological membranes using liposomes and EPR spin labeling. , 2010, Methods in molecular biology.

[47]  W. Subczynski,et al.  Physical properties of lipid bilayers from EPR spin labeling and their influence on chemical reactions in a membrane environment. , 2009, Free radical biology & medicine.

[48]  A. Engel,et al.  Atomic force microscopy of biological membranes. , 2009, Biophysical journal.

[49]  J. Hyde,et al.  Saturation recovery EPR and ELDOR at W-band for spin labels. , 2008, Journal of magnetic resonance.

[50]  W. Subczynski,et al.  Oxygen permeability of the lipid bilayer membrane made of calf lens lipids. , 2007, Biochimica et biophysica acta.

[51]  W. Subczynski,et al.  Physical properties of the lipid bilayer membrane made of calf lens lipids: EPR spin labeling studies. , 2007, Biochimica et biophysica acta.

[52]  J. M. Robinson,et al.  Membrane "lens" effect: focusing the formation of reactive nitrogen oxides from the *NO/O2 reaction. , 2007, Chemical research in toxicology.

[53]  J. S. Hyde,et al.  Three-dimensional dynamic structure of the liquid-ordered domain in lipid membranes as examined by pulse-EPR oxygen probing. , 2007, Biophysical journal.

[54]  Thomas Walz,et al.  The supramolecular architecture of junctional microdomains in native lens membranes , 2007, EMBO reports.

[55]  Nalin M. Kumar,et al.  Structural and immunocytochemical alterations in eye lens fiber cells from Cx46 and Cx50 knockout mice. , 2006, European journal of cell biology.

[56]  D. Budil,et al.  Calculating Slow‐Motion ESR Spectra of Spin‐Labeled Polymers , 2006 .

[57]  J. Hyde,et al.  Concentration by centrifugation for gas exchange EPR oximetry measurements with loop-gap resonators. , 2005, Journal of magnetic resonance.

[58]  B. Robinson,et al.  Explanation of spin-lattice relaxation rates of spin labels obtained with multifrequency saturation recovery EPR. , 2005, The journal of physical chemistry. A.

[59]  S. Eaton,et al.  Saturation Recovery EPR , 2005 .

[60]  W. Subczynski,et al.  EPR Oximetry in Biological and Model Samples , 2005 .

[61]  Kai Simons,et al.  Model systems, lipid rafts, and cell membranes. , 2004, Annual review of biophysics and biomolecular structure.

[62]  J. S. Hyde,et al.  Spin-Label EPR T1 Values Using Saturation Recovery from 2 to 35 GHz† , 2004 .

[63]  D. Borchman,et al.  Isolation and lipid characterization of cholesterol-enriched fractions in cortical and nuclear human lens fibers. , 2003, Investigative ophthalmology & visual science.

[64]  James E. Hall,et al.  Micro-domains of AQP0 in lens equatorial fibers. , 2002, Experimental eye research.

[65]  J. Joseph,et al.  Nitration and oxidation of a hydrophobic tyrosine probe by peroxynitrite in membranes: comparison with nitration and oxidation of tyrosine by peroxynitrite in aqueous solution. , 2001, Biochemistry.

[66]  F. Goñi,et al.  Interaction of cholesterol with sphingomyelin in mixed membranes containing phosphatidylcholine, studied by spin-label ESR and IR spectroscopies. A possible stabilization of gel-phase sphingolipid domains by cholesterol. , 2001, Biochemistry.

[67]  D. Marsh,et al.  High-frequency, spin-label EPR of nonaxial lipid ordering and motion in cholesterol-containing membranes. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[68]  Xiaoping Liu,et al.  Accelerated reaction of nitric oxide with O2 within the hydrophobic interior of biological membranes. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[69]  J. S. Hyde,et al.  Permeability of nitric oxide through lipid bilayer membranes. , 1996, Free radical research.

[70]  H Schindler,et al.  Imaging of single molecule diffusion. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[71]  J. S. Hyde,et al.  Hydrophobic barriers of lipid bilayer membranes formed by reduction of water penetration by alkyl chain unsaturation and cholesterol. , 1994, Biochemistry.

[72]  J. S. Hyde,et al.  Molecular organization and dynamics in bacteriorhodopsin-rich reconstituted membranes: discrimination of lipid environments by the oxygen transport parameter using a pulse ESR spin-labeling technique. , 1994, Biochemistry.

[73]  H. Khorana,et al.  A collision gradient method to determine the immersion depth of nitroxides in lipid bilayers: application to spin-labeled mutants of bacteriorhodopsin. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[74]  B. Robinson,et al.  Molecular dynamics in liquids: spin-lattice relaxation of nitroxide spin labels. , 1994, Science.

[75]  M. Thackeray,et al.  Definitions of terms relating to phase transitions of the solid state (IUPAC Recommendations 1994) , 1994 .

[76]  J. S. Hyde,et al.  Effect of alkyl chain unsaturation and cholesterol intercalation on oxygen transport in membranes: a pulse ESR spin labeling study. , 1991, Biochemistry.

[77]  J S Hyde,et al.  Microimmiscibility and three-dimensional dynamic structures of phosphatidylcholine-cholesterol membranes: translational diffusion of a copper complex in the membrane. , 1990, Biochemistry.

[78]  J. S. Hyde,et al.  Oxygen permeability of phosphatidylcholine--cholesterol membranes. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[79]  J. D. Robertson,et al.  Distribution of gap junctions and square array junctions in the mammalian lens. , 1989, Investigative ophthalmology & visual science.

[80]  J. S. Hyde,et al.  Spin-Label Oximetry , 1989 .

[81]  David J. Schneider,et al.  Calculating Slow Motional Magnetic Resonance Spectra , 1989 .

[82]  Robert B. Gennis,et al.  Biomembranes: Molecular Structure and Function , 1988 .

[83]  N. Ryba,et al.  Molecular exchange at the lipid-rhodopsin interface: spin-label electron spin resonance studies of rhodopsin-dimyristoylphosphatidylcholine recombinants. , 1987, Biochemistry.

[84]  A. Spector,et al.  Age-dependent changes in the distribution and concentration of human lens cholesterol and phospholipids. , 1987, Biochimica et biophysica acta.

[85]  J. Hyde,et al.  Q‐band loop‐gap resonator , 1986 .

[86]  A. Kusumi,et al.  Effects of very small amounts of cholesterol on gel-phase phosphatidylcholine membranes. , 1986, Biochimica et biophysica acta.

[87]  D. Melville,et al.  Exchange rates and numbers of annular lipids for the calcium and magnesium ion dependent adenosinetriphosphatase. , 1985, Biochemistry.

[88]  E. Meirovitch,et al.  Analysis of slow-motional electron spin resonance spectra in smectic phases in terms of molecular configuration, intermolecular interactions, and dynamics , 1984 .

[89]  J. B. Massey,et al.  Thermodynamics of lipid-protein association. Enthalphy of association of apolipoprotein A-II with dimyristoylphosphatidylcholine-cholesterol mixtures. , 1984, Biochimica et biophysica acta.

[90]  J. Hyde,et al.  Simulation of ESR spectra of the oxygen-sensitive spin-label probe CTPO , 1984 .

[91]  J. Hyde,et al.  The loop-gap resonator: a new microwave lumped circuit ESR sample structure , 1982 .

[92]  R. Pace,et al.  Molecular motions in lipid bilayers. III. Lateral and transverse diffusion in bilayers , 1982 .

[93]  J. S. Hyde,et al.  Oxygen transport parameter in membranes as deduced by saturation recovery measurements of spin-lattice relaxation times of spin labels. , 1982, Proceedings of the National Academy of Sciences of the United States of America.

[94]  J. Hyde,et al.  Effects of oxygen on EPR spectra of nitroxide spin-label probes of model membranes , 1981 .

[95]  D. Marsh,et al.  Electron spin resonance: spin labels. , 1981, Molecular biology, biochemistry, and biophysics.

[96]  W. Plachy,et al.  The diffusion-solubility of oxygen in lipid bilayers. , 1980, Biochimica et biophysica acta.

[97]  J. Vanderkooi,et al.  Oxygen diffusion in phospholipid artificial membranes studied by Fourier transform nuclear magnetic resonance. , 1979, Archives of biochemistry and biophysics.

[98]  A. Tall,et al.  Interaction of cholesterol, phospholipid and apoprotein in high density lipoprotein recombinants. , 1978, Biochimica et biophysica acta.

[99]  D. Carlsson Singlet oxygen – reactions with organic compounds and polymers, B. Ranby and J. F. Rabek, Eds., Wiley‐Interscience, New York, 1978, 331 pp., $37.00. , 1978 .

[100]  B. Aloni,et al.  The erythrocyte membrane site for the effect of temperature on osmotic fragility. , 1977, Biochimica et biophysica acta.

[101]  D. Wallach,et al.  Variations of lipid-protein interactions in erythrocyte ghosts as a function of temperature and pH in physiological and non-physiological ranges. A study using a paramagnetic quenching of protein fluorescence by nitroxide lipid analogues. , 1975, Biochimica et biophysica acta.

[102]  R. Kimmich,et al.  Solvation of oxygen in lecithin bilayers. , 1975, Chemistry and physics of lipids.

[103]  M. Houslay,et al.  Cholesterol is excluded from the phospholipid annulus surrounding an active calcium transport protein , 1975, Nature.

[104]  M. Povich Electron spin resonance oxygen broadening , 1975 .

[105]  J. Vanderkooi,et al.  Oxygen diffusion in biological and artificial membranes determined by the fluorochrome pyrene , 1975, The Journal of general physiology.

[106]  J. Knopp,et al.  Intracellular measurement of oxygen by quenching of fluorescence of pyrenebutyric acid. , 1972, Biochimica et biophysica acta.

[107]  S. Singer,et al.  The Fluid Mosaic Model of the Structure of Cell Membranes , 1972, Science.

[108]  L. H. Gray,et al.  The concentration of oxygen dissolved in tissues at the time of irradiation as a factor in radiotherapy. , 1953, The British journal of radiology.

[109]  Hugh Davson,et al.  A contribution to the theory of permeability of thin films , 1935 .

[110]  E. Gorter,et al.  ON BIMOLECULAR LAYERS OF LIPOIDS ON THE CHROMOCYTES OF THE BLOOD , 1925, The Journal of experimental medicine.