Fast computation of minimum hybridization networks
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Daniel H. Huson | Benjamin Albrecht | Céline Scornavacca | Alberto Cenci | D. Huson | Céline Scornavacca | A. Cenci | Benjamin Albrecht
[1] Loren H. Rieseberg,et al. Hybridization, introgression, and linkage evolution , 2004, Plant Molecular Biology.
[2] Céline Scornavacca,et al. Multigenic phylogeny and analysis of tree incongruences in Triticeae (Poaceae) , 2011, BMC Evolutionary Biology.
[3] References , 1971 .
[4] Daniel H. Huson,et al. Phylogenetic Networks - Concepts, Algorithms and Applications , 2011 .
[5] Charles Semple,et al. On the Computational Complexity of the Rooted Subtree Prune and Regraft Distance , 2005 .
[6] Simone Linz,et al. A First Step Toward Computing All Hybridization Networks For Two Rooted Binary Phylogenetic Trees , 2011, J. Comput. Biol..
[7] R. Schiffer,et al. INTRODUCTION , 1988, Neurology.
[8] K. Schwenk,et al. Introduction. Extent, processes and evolutionary impact of interspecific hybridization in animals , 2008, Philosophical Transactions of the Royal Society B: Biological Sciences.
[9] J. Mallet. Hybrid speciation , 2007, Nature.
[10] Zhi-Zhong Chen,et al. HybridNET: a tool for constructing hybridization networks , 2010, Bioinform..
[11] Simone Linz,et al. Quantifying Hybridization in Realistic Time , 2011, J. Comput. Biol..
[12] E. Kellogg,et al. Testing for Phylogenetic Conflict Among Molecular Data Sets in the Tribe Triticeae (Gramineae) , 1996 .
[13] T. Endo,et al. Characterization of genetic variation in and phylogenetic relationships among diploid Aegilops species by AFLP: incongruity of chloroplast and nuclear data , 2004, Theoretical and Applied Genetics.
[14] Zhi-Zhong Chen,et al. Algorithms for Reticulate Networks of Multiple Phylogenetic Trees , 2012, IEEE/ACM Transactions on Computational Biology and Bioinformatics.
[15] Norbert Zeh,et al. A Unifying View on Approximation and FPT of Agreement Forests , 2009, WABI.
[16] Norbert Zeh,et al. Fast FPT Algorithms for Computing Rooted Agreement Forests: Theory and Experiments , 2010, SEA.
[17] M. Bordewich,et al. Computing the Hybridization Number of Two Phylogenetic Trees Is Fixed-Parameter Tractable , 2007, IEEE/ACM Transactions on Computational Biology and Bioinformatics.
[18] Rita Casadio,et al. Algorithms in Bioinformatics, 5th International Workshop, WABI 2005, Mallorca, Spain, October 3-6, 2005, Proceedings , 2005, WABI.
[19] Tao Jiang,et al. On the Complexity of Comparing Evolutionary Trees , 1996, Discret. Appl. Math..
[20] T. Giraud,et al. Speciation in fungi. , 2008, Fungal genetics and biology : FG & B.
[21] Pamela S Soltis,et al. The role of hybridization in plant speciation. , 2009, Annual review of plant biology.
[22] L. Rieseberg,et al. The ecological genetics of homoploid hybrid speciation. , 2005, The Journal of heredity.
[23] Charles Semple,et al. Hybrids in real time. , 2006, Systematic biology.
[24] Simone Linz,et al. A Cluster Reduction for Computing the Subtree Distance Between Phylogenies , 2011 .
[25] O. Gascuel,et al. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. , 2010, Systematic biology.
[26] Charles Semple,et al. Computing the minimum number of hybridization events for a consistent evolutionary history , 2007, Discret. Appl. Math..
[27] V. Moulton,et al. Bounding the Number of Hybridisation Events for a Consistent Evolutionary History , 2005, Journal of mathematical biology.
[28] K. M. Sefc,et al. Reticulate phylogeny of gastropod-shell-breeding cichlids from Lake Tanganyika – the result of repeated introgressive hybridization , 2007, BMC Evolutionary Biology.
[29] D. Posada. jModelTest: phylogenetic model averaging. , 2008, Molecular biology and evolution.
[30] E. Kellogg,et al. When Genes Tell Different Stories: the Diploid Genera of Triticeae (Gramineae) , 1996 .