Profibrotic Transcriptome Signature Macrophage Epoxygenase Determines a

Epoxygenases belong to the cytochrome P450 family. They generate epoxyeicosatrienoic acids, which are known to have anti-inflammatory effects, but little is known about their role in macrophage function. By high-throughput sequencing of RNA in primary macrophages derived from rodents and humans, we establish the relative expression of epoxygenases in these cells. Zinc-finger nuclease-mediated targeted gene deletion of the major rat macrophage epoxygenase Cyp2j4 (ortholog of human CYP2J2 ) resulted in reduced epoxyeicosatrienoic acid synthesis. Cyp2j4 2 / 2 macrophages have relatively increased peroxisome proliferator-activated receptor- g levels and show a profibrotic transcriptome, displaying overexpression of a specific subset of genes (260 transcripts) primarily involved in extracellular matrix, with fibronectin being the most abundantly expressed transcript. Fibro-nectin expression is under the control of epoxygenase activity in human and rat primary macrophages. In keeping with the in vitro findings, Cyp2j4 2 / 2 rats show upregulation of type I collagen following unilateral ureter obstruction of the kidney, and quantitative proteomics analysis (liquid chromatography–tandem mass spectrometry) showed increased renal type I collagen and fibronectin protein abundance resulting from experimentally induced crescentic glomerulonephritis in these rats. Taken together, these results identify the rat epoxygenase Cyp2j4 as a determinant of a profibrotic RNA sequencing (RNA-seq). We show that rodent macrophages predominantly express the human CYP2J2 ortholog ( Cyp2j4 in rats; Cyp2j6 in mice). By using zinc-finger nuclease (ZFN) technology in the rat, we generated an inbred rat strain deficient for functional Cyp2j4 . We show that Cyp2j4 2 / 2 bone marrow–derived macrophages (BMDMs) have reduced EET production (11,12- and 14,15-EETs) and adopt a profibrotic phenotype with transcriptional activation of extracellular among which fibronectin is the most Epoxygenase-derived EETs regulate fibronectin in and human macrophages. Cyp2j4 2 / 2 show enhanced , , and and following left kidney. In quantitative mass [LC-MS/ MS]) in control and kidneys increase in renal I collagen and fibronectin in / 2 compared controls in a model glomerular inflammation.

[1]  Enrico Petretto,et al.  Integrating Phosphoproteome and Transcriptome Reveals New Determinants of Macrophage Multinucleation* , 2014, Molecular & Cellular Proteomics.

[2]  G. Siest,et al.  Human cytochrome P450 epoxygenases: variability in expression and role in inflammation-related disorders. , 2014, Pharmacology & therapeutics.

[3]  I. Fleming The Pharmacology of the Cytochrome P450 Epoxygenase/Soluble Epoxide Hydrolase Axis in the Vasculature and Cardiovascular Disease , 2014, Pharmacological Reviews.

[4]  Xiao-ming Meng,et al.  Inflammatory processes in renal fibrosis , 2014, Nature Reviews Nephrology.

[5]  Jun Li,et al.  Kcnn4 Is a Regulator of Macrophage Multinucleation in Bone Homeostasis and Inflammatory Disease , 2014, Cell reports.

[6]  J. Wess,et al.  Genome‐wide association mapping of acute lung injury in neonatal inbred mice , 2014, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[7]  S. Gordon,et al.  The M1 and M2 paradigm of macrophage activation: time for reassessment , 2014, F1000prime reports.

[8]  D. Zeldin,et al.  CYP2J2-Derived Epoxyeicosatrienoic Acids Suppress Endoplasmic Reticulum Stress in Heart Failure , 2014, Molecular Pharmacology.

[9]  Naifang Lu,et al.  Deletion of the Murine Cytochrome P450 Cyp2j Locus by Fused BAC-Mediated Recombination Identifies a Role for Cyp2j in the Pulmonary Vascular Response to Hypoxia , 2013, PLoS genetics.

[10]  J. Falck,et al.  Orally Active Epoxyeicosatrienoic Acid Analog Attenuates Kidney Injury in Hypertensive Dahl Salt–Sensitive Rat , 2013, Hypertension.

[11]  D. Gilroy,et al.  Inducible CYP2J2 and Its Product 11,12-EET Promotes Bacterial Phagocytosis: A Role for CYP2J2 Deficiency in the Pathogenesis of Crohn’s Disease? , 2013, PloS one.

[12]  G. Favero,et al.  Abstract 34: CYP2J2 Targeting to Endothelial Cells Attenuates Adiposity and Vascular Dysfunction in Mice Fed a High Fat Diet by Reprogramming Adipocyte Phenotype , 2013 .

[13]  T. Aitman,et al.  Experimental crescentic glomerulonephritis: a new bicongenic rat model , 2013, Disease Models & Mechanisms.

[14]  Hau D. Le,et al.  Epoxyeicosanoids promote organ and tissue regeneration , 2013, Proceedings of the National Academy of Sciences.

[15]  Rui Li,et al.  Cardiac-specific overexpression of CYP2J2 attenuates diabetic cardiomyopathy in male streptozotocin-induced diabetic mice. , 2013, Endocrinology.

[16]  Wanjun Liu,et al.  CYP2J2 overexpression increases EETs and protects against angiotensin II-induced abdominal aortic aneurysm in mice[S] , 2013, Journal of Lipid Research.

[17]  E. Petretto,et al.  Combined ChIP-Seq and transcriptome analysis identifies AP-1/JunD as a primary regulator of oxidative stress and IL-1β synthesis in macrophages , 2013, BMC Genomics.

[18]  C. Serhan,et al.  Specific lipid mediator signatures of human phagocytes: microparticles stimulate macrophage efferocytosis and pro-resolving mediators. , 2012, Blood.

[19]  C. Chen,et al.  Delivery of AAV2-CYP2J2 protects remnant kidney in the 5/6-nephrectomized rat via inhibition of apoptosis and fibrosis. , 2012, Human gene therapy.

[20]  T. Wynn,et al.  Protective and pathogenic functions of macrophage subsets , 2011, Nature Reviews Immunology.

[21]  K. Tomer,et al.  Endothelial CYP epoxygenase overexpression and soluble epoxide hydrolase disruption attenuate acute vascular inflammatory responses in mice , 2011, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[22]  A. Seluanov,et al.  Establishing primary adult fibroblast cultures from rodents. , 2010, Journal of visualized experiments : JoVE.

[23]  T. Aitman,et al.  Genetic loci modulate macrophage activity and glomerular damage in experimental glomerulonephritis. , 2010, Journal of the American Society of Nephrology : JASN.

[24]  Davis J. McCarthy,et al.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..

[25]  Bruce D. Hammock,et al.  Soluble epoxide hydrolase as a therapeutic target for cardiovascular diseases , 2009, Nature Reviews Drug Discovery.

[26]  B. Hammock,et al.  Soluble epoxide hydrolase gene deletion attenuates renal injury and inflammation with DOCA-salt hypertension. , 2009, American journal of physiology. Renal physiology.

[27]  Y. Barak,et al.  Peroxisome proliferator‐activated receptor‐γ abrogates Smad‐dependent collagen stimulation by targeting the p300 transcriptional coactivator , 2009, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[28]  Jonathan Schug,et al.  PPARgamma and C/EBP factors orchestrate adipocyte biology via adjacent binding on a genome-wide scale. , 2008, Genes & development.

[29]  J. Pollard Macrophages define the invasive microenvironment in breast cancer , 2008, Journal of leukocyte biology.

[30]  K. Node,et al.  Expression of the cytochrome P450 epoxygenase CYP2J2 in human monocytic leukocytes. , 2008, Life sciences.

[31]  Mahavir Singh,et al.  Cytochrome P450 (CYP) 2J2 gene transfection attenuates MMP‐9 via inhibition of NF‐κβ in hyperhomocysteinemia , 2008, Journal of cellular physiology.

[32]  L. Game,et al.  Jund is a determinant of macrophage activation and is associated with glomerulonephritis susceptibility , 2008, Nature Genetics.

[33]  S. Lorkowski,et al.  Production of Type VI Collagen by Human Macrophages: A New Dimension in Macrophage Functional Heterogeneity1 2 , 2008, The Journal of Immunology.

[34]  Alberto Mantovani,et al.  Transcriptional Profiling of the Human Monocyte-to-Macrophage Differentiation and Polarization: New Molecules and Patterns of Gene Expression1 , 2006, The Journal of Immunology.

[35]  Michael Lehrke,et al.  The Many Faces of PPARγ , 2005, Cell.

[36]  J. Shyy,et al.  The antiinflammatory effect of laminar flow: the role of PPARgamma, epoxyeicosatrienoic acids, and soluble epoxide hydrolase. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[37]  Kevin R. Smith,et al.  Attenuation of tobacco smoke-induced lung inflammation by treatment with a soluble epoxide hydrolase inhibitor. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[38]  Andrew Leask,et al.  TGF‐β signaling and the fibrotic response , 2004, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[39]  A. Ghosh,et al.  Disruption of transforming growth factor β signaling and profibrotic responses in normal skin fibroblasts by peroxisome proliferator–activated receptor γ , 2004 .

[40]  D. Zeldin Epoxygenase Pathways of Arachidonic Acid Metabolism* , 2001, The Journal of Biological Chemistry.

[41]  K. Ley,et al.  Anti-inflammatory properties of cytochrome P450 epoxygenase-derived eicosanoids. , 1999, Science.

[42]  C. Pusey,et al.  Development of scarring and renal failure in a rat model of crescentic glomerulonephritis. , 1999, Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association.

[43]  M. Barrios-Rodiles,et al.  Novel regulation of cyclooxygenase-2 expression and prostaglandin E2 production by IFN-gamma in human macrophages. , 1998, Journal of immunology.

[44]  K. Tomer,et al.  Molecular Cloning and Expression of CYP2J2, a Human Cytochrome P450 Arachidonic Acid Epoxygenase Highly Expressed in Heart (*) , 1996, The Journal of Biological Chemistry.

[45]  R. Crystal,et al.  Modulation of fibronectin gene expression in human mononuclear phagocytes. , 1987, The Journal of clinical investigation.

[46]  R. Crystal,et al.  Production of fibronectin by the human alveolar macrophage: mechanism for the recruitment of fibroblasts to sites of tissue injury in interstitial lung diseases. , 1981, Proceedings of the National Academy of Sciences of the United States of America.

[47]  M. Mayr,et al.  Cytochrome P4502S1: a novel monocyte/macrophage fatty acid epoxygenase in human atherosclerotic plaques , 2012, Basic Research in Cardiology.

[48]  John D Imig,et al.  Epoxides and soluble epoxide hydrolase in cardiovascular physiology. , 2012, Physiological reviews.

[49]  Michael Lehrke,et al.  The many faces of PPARgamma. , 2005, Cell.

[50]  A. Ghosh,et al.  Disruption of transforming growth factor beta signaling and profibrotic responses in normal skin fibroblasts by peroxisome proliferator-activated receptor gamma. , 2004, Arthritis and rheumatism.

[51]  B. Spiegelman,et al.  C/EBPalpha induces adipogenesis through PPARgamma: a unified pathway. , 2002, Genes & development.

[52]  N. Abraham,et al.  Cytochrome P450-dependent arachidonic acid metabolism in human kidney. , 1990, Kidney international.