Development of a 63K SNP Array for Cotton and High-Density Mapping of Intraspecific and Interspecific Populations of Gossypium spp.
暂无分享,去创建一个
Don C. Jones | C. Lawley | M. Ganal | M. Gore | J. Poland | M. Giband | J. Lacape | H. Ashrafi | D. Llewellyn | Sunil Kumar Singh | S. Hague | J. Jenkins | J. Udall | R. Percy | A. Spriggs | S. Sawant | I. Wilson | J. Frelichowski | D. Stelly | M. Ulloa | A. Pepper | M. Claverie | Ramesh Buyyarapu | Scott M. Yourstone | A. Van Deynze | J. Scheffler | D. Fang | Amanda M. Hulse-Kemp | M. Islam | R. Byers | Archana Bhardwaj | L. Hinze | J. Burke | P. Riggs | J. Plieske | K. J. Kochan | Jana Lemm | Xiuting Zheng | Sumit K Bag | D. Harker | Qianhao Zhu | Fei Wang | Jen M. Taylor | Shirley S Wang | Krishan Mohan Rai | K. Kochan
[1] Don C. Jones,et al. A Long‐Read Transcriptome Assembly of Cotton (Gossypium hirsutum L.) and Intraspecific Single Nucleotide Polymorphism Discovery , 2015, The plant genome.
[2] Yuzhen Shi,et al. Constructing a high-density linkage map for Gossypium hirsutum × Gossypium barbadense and identifying QTLs for lint percentage. , 2015, Journal of integrative plant biology.
[3] Z. Chen,et al. BAC-End Sequence-Based SNP Mining in Allotetraploid Cotton (Gossypium) Utilizing Resequencing Data, Phylogenetic Inferences, and Perspectives for Genetic Mapping , 2015, G3: Genes, Genomes, Genetics.
[4] J. Jenkins,et al. Detection, Validation, and Application of Genotyping‐by‐Sequencing Based Single Nucleotide Polymorphisms in Upland Cotton , 2015, The plant genome.
[5] John Z. Yu,et al. Molecular characterization of the Gossypium Diversity Reference Set of the US National Cotton Germplasm Collection , 2014, Theoretical and Applied Genetics.
[6] J. Poland,et al. A SNP Genotyping Array for Hexaploid Oat , 2014 .
[7] Don C. Jones,et al. Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts , 2014, BMC Genomics.
[8] Riccardo Velasco,et al. Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh) , 2014, PloS one.
[9] C. Lawley,et al. A high-throughput SNP array in the amphidiploid species Brassica napus shows diversity in resistance genes , 2014, Functional & Integrative Genomics.
[10] Jennifer M. Taylor,et al. Transcriptome and Complexity-Reduced, DNA-Based Identification of Intraspecies Single-Nucleotide Polymorphisms in the Polyploid Gossypium hirsutum L. , 2014, G3: Genes, Genomes, Genetics.
[11] Xun Xu,et al. Genome sequence of the cultivated cotton Gossypium arboreum , 2014, Nature Genetics.
[12] Morten Lillemo,et al. Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array , 2014, Plant biotechnology journal.
[13] M. Gore,et al. Linkage Map Construction and Quantitative Trait Locus Analysis of Agronomic and Fiber Quality Traits in Cotton , 2014 .
[14] Xing Wang Deng,et al. A high-density SNP genotyping array for rice biology and molecular breeding. , 2014, Molecular plant.
[15] M. Gore,et al. Genetic diversity and population structure in the US Upland cotton (Gossypium hirsutum L.) , 2014, Theoretical and Applied Genetics.
[16] Ping Zheng,et al. CottonGen: a genomics, genetics and breeding database for cotton research , 2013, Nucleic Acids Res..
[17] Sunil Kumar Singh,et al. Large-scale resource development in Gossypium hirsutum L. by 454 sequencing of genic-enriched libraries from six diverse genotypes. , 2013, Plant biotechnology journal.
[18] H. V. van Leeuwen,et al. An Ultra-High-Density, Transcript-Based, Genetic Map of Lettuce , 2013, G3: Genes, Genomes, Genetics.
[19] Randall L. Nelson,et al. Development and Evaluation of SoySNP50K, a High-Density Genotyping Array for Soybean , 2013, PloS one.
[20] UlloaMauricio,et al. Genetic diversity and population structure of cotton (Gossypium spp.) of the New World assessed by SSR markers , 2013 .
[21] M. Giband,et al. Deep Sequencing Reveals Differences in the Transcriptional Landscapes of Fibers from Two Cultivated Species of Cotton , 2012, PloS one.
[22] M. Ganal,et al. Large SNP arrays for genotyping in crop plants , 2012, Journal of Biosciences.
[23] J. Lacape,et al. A High Density Consensus Genetic Map of Tetraploid Cotton That Integrates Multiple Component Maps through Molecular Marker Redundancy Check , 2012, PloS one.
[24] John Z. Yu,et al. The draft genome of a diploid cotton Gossypium raimondii , 2012, Nature Genetics.
[25] Shiyi Tang,et al. Genetic mapping and quantitative trait locus analysis of fiber quality traits using a three-parent composite population in upland cotton (Gossypium hirsutum L.) , 2012, Molecular Breeding.
[26] J. Udall,et al. Development and mapping of SNP assays in allotetraploid cotton , 2012, Theoretical and Applied Genetics.
[27] John Z. Yu,et al. A High-Density Simple Sequence Repeat and Single Nucleotide Polymorphism Genetic Map of the Tetraploid Cotton Genome , 2012, G3: Genes | Genomes | Genetics.
[28] O. Martin,et al. A Large Maize (Zea mays L.) SNP Genotyping Array: Development and Germplasm Genotyping, and Genetic Mapping to Compare with the B73 Reference Genome , 2011, PloS one.
[29] C. Buell,et al. Single nucleotide polymorphism discovery in elite north american potato germplasm , 2011, BMC Genomics.
[30] A. Nekrutenko,et al. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences , 2010, Genome Biology.
[31] Jianbing Yan,et al. Genetic Characterization and Linkage Disequilibrium Estimation of a Global Maize Collection Using SNP Markers , 2009, PloS one.
[32] John Z. Yu,et al. Sampling nucleotide diversity in cotton , 2009, BMC Plant Biology.
[33] Jing Zheng,et al. Construction of a comprehensive PCR-based marker linkage map and QTL mapping for fiber quality traits in upland cotton (Gossypium hirsutum L.) , 2009, Molecular Breeding.
[34] Tianzhen Zhang,et al. Genetic mapping of quantitative trait loci for fiber quality and yield trait by RIL approach in Upland cotton , 2007, Euphytica.
[35] O. L. May,et al. Chromosome structural changes in diploid and tetraploid A genomes of Gossypium. , 2006, Genome.
[36] Vipin K. Rastogi,et al. A 3347-Locus Genetic Recombination Map of Sequence-Tagged Sites Reveals Features of Genome Organization, Transmission and Evolution of Cotton (Gossypium) , 2004, Genetics.
[37] Trung B. Nguyen,et al. A combined RFLP-SSR-AFLP map of tetraploid cotton based on a Gossypium hirsutum x Gossypium barbadense backcross population. , 2003, Genome.
[38] K. Manly,et al. Map Manager QTX, cross-platform software for genetic mapping , 2001, Mammalian Genome.
[39] M. S. Brown,et al. Identification of the chromosomes of Gossypium hirsutum L. by means of translocations , 1980 .
[40] R. Kohel,et al. Texas Marker-1. Description of a Genetic Standard for Gossypium hirsutum L. 1 , 1970 .
[41] J. Wendel,et al. Molecular confirmation of species status for the allopolyploid cotton species, Gossypium ekmanianum Wittmack , 2014, Genetic Resources and Crop Evolution.
[42] A. Paterson,et al. Construction of genetic map and QTL analysis of fiber quality traits for Upland cotton (Gossypium hirsutum L.) , 2014, Euphytica.
[43] N. Tinker,et al. Centromeric position and genomic allocation of a repetitive sequence isolated from chromosome 18D of hexaploid oat, Avena sativa L. , 2014, Genetic Resources and Crop Evolution.
[44] M. Gore,et al. Registration of the TM-1/NM24016 Cotton Recombinant Inbred Mapping Population , 2012 .
[45] J. Stewart,et al. Evolution and natural history of the cotton genus. , 2009 .
[46] J. Ooijen,et al. JoinMap® 4, Software for the calculation of genetic linkage maps in experimental populations , 2006 .
[47] R. Voorrips. MapChart: software for the graphical presentation of linkage maps and QTLs. , 2002, The Journal of heredity.
[48] Justin T. Page,et al. Ecology, Evolution and Organismal Biology Publications Ecology, Evolution and Organismal Biology Repeated Polyploidization of Gossypium Genomes and the Evolution of Spinnable Cotton Fibres , 2022 .