Application of the Kalman Filter for Faster Strong Coupling of Cardiovascular Simulations

In this paper, we propose a method for reducing the computational cost of strong coupling for multiscale cardiovascular simulation models. In such a model, individual model modules of myocardial cell, left ventricular structural dynamics, and circulatory hemodynamics are coupled. The strong coupling method enables stable and accurate calculation, but requires iterative calculations which are computationally expensive. The iterative calculations can be reduced, if accurate initial approximations are made available by predictors. The proposed method uses the Kalman filter to estimate accurate predictions by filtering out noise included in past values. The performance of the proposed method was assessed with an application to a previously published multiscale cardiovascular model. The proposed method reduced the number of iterations by 90% and 62% compared with no prediction and Lagrange extrapolation, respectively. Even when the parameters were varied and number of elements of the left ventricular finite-element model increased, the number of iterations required by the proposed method was significantly lower than that without prediction. These results indicate the robustness, scalability, and validity of the proposed method.

[1]  Satoshi Matsuoka,et al.  Simulation analysis of intracellular Na+ and Cl- homeostasis during beta 1-adrenergic stimulation of cardiac myocyte. , 2008, Progress in biophysics and molecular biology.

[2]  J A Negroni,et al.  A cardiac muscle model relating sarcomere dynamics to calcium kinetics. , 1996, Journal of molecular and cellular cardiology.

[3]  Tetsuya Matsuda,et al.  A study on prediction methods for a cardiovascular strong-coupling simulation , 2011, 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[4]  Akira Amano,et al.  An approximation model of myocardial crossbridge for weak coupling calculation of left ventricle model and circulation model , 2008, 2008 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[5]  Satoshi Matsuoka,et al.  simBio: a Java package for the development of detailed cell models. , 2006, Progress in biophysics and molecular biology.

[6]  Giuseppe Tarantini,et al.  Letter by Razzolini and Tarantini regarding article, "Restrictive left ventricular filling pattern does not result from increased left atrial pressure alone". , 2008, Circulation.

[7]  P. Hunter,et al.  New developments in a strongly coupled cardiac electromechanical model. , 2005, Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology.

[8]  Akira Amano,et al.  DynaBioS: A platform for cell/biodynamics simulators , 2007 .

[9]  Xavier Tricoche,et al.  Intramural activation and repolarization sequences in canine ventricles. Experimental and simulation studies. , 2005, Journal of electrocardiology.

[10]  Steven Niederer,et al.  Efficient Computational Methods for Strongly Coupled Cardiac Electromechanics , 2012, IEEE Transactions on Biomedical Engineering.

[11]  Jonathan P. Whiteley,et al.  A Numerical Method for Cardiac Mechanoelectric Simulations , 2009, Annals of Biomedical Engineering.

[12]  Tetsuya Matsuda,et al.  A coupling method for a cardiovascular simulation model which includes the Kalman Filter , 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[13]  D. Simon Optimal State Estimation: Kalman, H Infinity, and Nonlinear Approaches , 2006 .

[14]  S. Masutani,et al.  Restrictive Left Ventricular Filling Pattern Does Not Result From Increased Left Atrial Pressure Alone , 2008, Circulation.

[15]  Roy C. P. Kerckhoffs,et al.  Computational Methods for Cardiac Electromechanics , 2006, Proceedings of the IEEE.

[16]  Serge Piperno,et al.  Explicit/implicit fluid/structure staggered procedures with a structural predictor and fluid subcycling for 2D inviscid aeroelastic simulations , 1997 .

[17]  Martin J Bishop,et al.  Soft Tissue Modelling of Cardiac Fibres for Use in Coupled Mechano-Electric Simulations , 2007, Bulletin of mathematical biology.

[18]  Thor Edvardsen,et al.  Determinants of Left Ventricular Early-Diastolic Lengthening Velocity: Independent Contributions From Left Ventricular Relaxation, Restoring Forces, and Lengthening Load , 2009, Circulation.

[19]  S. Niederer,et al.  An improved numerical method for strong coupling of excitation and contraction models in the heart. , 2008, Progress in biophysics and molecular biology.