EEG signal enhancement using cascaded S-Golay filter

Abstract Electroencephalogram (EEG) is the most popular signal used for diagnosis of brain disorders. A good quality EEG signal provides the proper interpretation and identification of physiological and pathological phenomena. However, these recordings are often corrupted by different kinds of noise. As Savitzky Golay smoothing filter (SGSF) preserves the peaks and minimize the signal distortion, its use in cascade may further enhance this capability. Therefore in the present work cascaded SGSF (CSGSF) is proposed to filter the noisy EEG signals. The CSGSF combines two successive Savitzky Golay filters. For comparative analysis, other cascaded arrangements like cascaded moving average filter (CMAF), MAF-SGSF, SGSF-Binomial and single stage SGSF are also designed. These filters are tested on artificial EEG signals added with white Gaussian noise and non Gaussian noise. These filters are also tested on real time EEG signals. The filtered signals are assessed through signal to noise ratio (SNR), signal to signal plus noise ratio (SSNR), SNR improvement (SNRI), mean square error (MSE) and correlation coefficient (COR). It is revealed from the results that CSGSF outperforms the other designed filters in case of artificial and real time EEG signals.

[1]  Selina Husna Banu,et al.  EEG in ICU: A monitoring tool for critically ill patient , 2014 .

[2]  R G Mark,et al.  Robust heart rate estimation from multiple asynchronous noisy sources using signal quality indices and a Kalman filter , 2008, Physiological measurement.

[3]  Miroslav Zivanovic,et al.  Wavelet-based unsupervised learning method for electrocardiogram suppression in surface electromyograms. , 2016, Medical engineering & physics.

[4]  Nor Ashidi Mat Isa,et al.  Denoising-Based Cascaded Algorithms for Smoothing of Different Level Additive White Gaussian Noise-Corrupted Spectra , 2011 .

[5]  Erich Schröger,et al.  Digital filter design for electrophysiological data – a practical approach , 2015, Journal of Neuroscience Methods.

[6]  R. Wyatt,et al.  A two-stage filter for smoothing multivariate noisy data on unstructured grids☆ , 2004 .

[7]  J. Y. Wang A new method for evaluating ECG signal quality for multi-lead arrhythmia analysis , 2002, Computers in Cardiology.

[8]  F. J. Alonso,et al.  An automatic SSA-based de-noising and smoothing technique for surface electromyography signals , 2015, Biomed. Signal Process. Control..

[9]  Xiao Hu,et al.  Pulse onset detection using neighbor pulse-based signal enhancement. , 2009, Medical engineering & physics.

[10]  B. Boashash,et al.  Preprocessing and time-frequency analysis of newborn EEG seizures , 2001, IEEE Engineering in Medicine and Biology Magazine.

[11]  H Hinrichs,et al.  A trend-detection algorithm for intraoperative EEG monitoring. , 1996, Medical engineering & physics.

[12]  Phillip I. Good,et al.  Analyzing the Large Number of Variables in Biomedical and Satellite Imagery , 2011 .

[13]  S. Hargittai Savitzky-Golay least-squares polynomial filters in ECG signal processing , 2005, Computers in Cardiology, 2005.

[14]  Roy D. Wallen,et al.  System Theory and Practical Applications of Biomedical Signals , 2004 .

[15]  Yessi Jusman,et al.  Cascaded Binomial Filter Algorithms for Noisy FTIR Spectra , 2011 .

[16]  Lei Shi,et al.  Detrending knee joint vibration signals with a cascade moving average filter , 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[17]  M. Awal,et al.  An adaptive level dependent wavelet thresholding for ECG denoising , 2014 .

[18]  Ali H. Shoeb,et al.  Application of Machine Learning To Epileptic Seizure Detection , 2010, ICML.

[19]  Kyungmin Su,et al.  The PREP pipeline: standardized preprocessing for large-scale EEG analysis , 2015, Front. Neuroinform..

[20]  Kyawt Na Thar Min. Speech enhancement employing Laplacian-Gaussian mixture. , 2011 .

[21]  Chandra Sekhar Seelamantula,et al.  Robust Savitzky-Golay filters , 2014, 2014 19th International Conference on Digital Signal Processing.

[22]  Saleh A. Alshebeili,et al.  Enhancing the reliability of epileptic seizure alarms for scalp EEG signals , 2015, 2015 IEEE Global Conference on Signal and Information Processing (GlobalSIP).

[23]  Vijander Singh,et al.  Prospects and limitations of non-invasive blood glucose monitoring using near-infrared spectroscopy , 2015, Biomed. Signal Process. Control..

[24]  Ronald W. Schafer,et al.  What Is a Savitzky-Golay Filter? [Lecture Notes] , 2011, IEEE Signal Processing Magazine.

[25]  Qiao Li,et al.  ECG Signal Quality During Arrhythmia and Its Application to False Alarm Reduction , 2013, IEEE Transactions on Biomedical Engineering.

[26]  Cagatay Candan,et al.  A unified framework for derivation and implementation of Savitzky-Golay filters , 2014, Signal Process..

[27]  Jeffrey M. Hausdorff,et al.  Physionet: Components of a New Research Resource for Complex Physiologic Signals". Circu-lation Vol , 2000 .

[28]  Hamed Azami,et al.  A New Signal Segmentation Approach Based on Singular Value Decomposition and Intelligent Savitzky-Golay Filter , 2013 .

[29]  Maria Piotrkiewicz,et al.  Method of automatic recognition and other solutions used in new computer program for full decomposition of EMG signals , 2015 .

[30]  Qiao Li,et al.  Artificial arterial blood pressure artifact models and an evaluation of a robust blood pressure and heart rate estimator , 2009, Biomedical engineering online.

[31]  A. Savitzky,et al.  Smoothing and Differentiation of Data by Simplified Least Squares Procedures. , 1964 .

[32]  M. S. Mohammed,et al.  Performance evaluation of the digital smoothing polynomial filter in ultrasonic IRIS applications , 2013, Russian Journal of Nondestructive Testing.

[33]  Joon Lee,et al.  Signal Quality Estimation With Multichannel Adaptive Filtering in Intensive Care Settings , 2012, IEEE Transactions on Biomedical Engineering.

[34]  Guido Righini,et al.  Spectral noise removal by new digital smoothing routine , 1995 .

[35]  Olivier Caspary,et al.  Denoising Depth EEG Signals During DBS Using Filtering and Subspace Decomposition , 2013, IEEE Transactions on Biomedical Engineering.

[36]  Yuehua Li,et al.  Two-stage non-local means filtering with adaptive smoothing parameter , 2014 .

[37]  M. Chambrin Alarms in the intensive care unit: how can the number of false alarms be reduced? , 2001, Critical care.

[38]  N H Lovell,et al.  Signal quality measures for pulse oximetry through waveform morphology analysis , 2011, Physiological measurement.

[39]  B. Stigsby,et al.  Median somatosensory evoked potential intraoperative monitoring: Recommendations based on signal-to-noise ratio analysis , 2009, Clinical Neurophysiology.

[40]  Joanna Górecka,et al.  Artifacts Extraction from EEG Data Using the Infomax Approach , 2011 .

[41]  Daniel Friedman,et al.  Continuous Electroencephalogram Monitoring in the Intensive Care Unit , 2009, Anesthesia and analgesia.

[42]  Uday B. Desai,et al.  A Novel Algorithm for Bluetooth ECG , 2012, IEEE Transactions on Biomedical Engineering.

[43]  Mahsa Raeiatibanadkooki,et al.  Real Time Processing and Transferring ECG Signal by a Mobile Phone , 2014, Acta informatica medica : AIM : journal of the Society for Medical Informatics of Bosnia & Herzegovina : casopis Drustva za medicinsku informatiku BiH.

[44]  Vaidotas Marozas,et al.  Ensemble empirical mode decomposition based feature enhancement of cardio signals. , 2013, Medical engineering & physics.

[45]  M. Bromba,et al.  Efficient computation of polynomial smoothing digital filters , 1979 .

[46]  A. Proctor,et al.  Smoothing of digital x-ray photoelectron spectra by an extended sliding least-squares approach , 1980 .

[47]  Vijander Singh,et al.  Wrapper based wavelet feature optimization for EEG signals , 2012 .

[48]  Volkan Y. Senyurek,et al.  Performance Comparison of Artificial Neural Network and Gaussian Mixture Model in Classifying Hand Motions by Using sEMG Signals , 2013 .

[49]  Vijander Singh,et al.  Performance Evaluation and Implementation of FPGA Based SGSF in Smart Diagnostic Applications , 2016, Journal of Medical Systems.