Anti-Markovnikov alkene oxidation by metal-oxo–mediated enzyme catalysis

Teaching an enzyme to switch sites There has been a recent flurry of activity in modifying enzymes to conduct unnatural chemical reactions more cleanly or selectively than synthetic chemical catalysts. Hammer et al. now report application of a cytochrome P450 variant to an oxidation that has largely eluded efficient catalysis. They used directed evolution to mutate the enzyme so that it placed oxygen at the less substituted carbon of the C=C double bond in styrenes, forming aldehyde products. They thereby attained opposite site selectivity to that of the widely used palladium-catalyzed Wacker-Tsuji oxidation. Science, this issue p. 215 Directed evolution modifies cytochrome P450 to catalyze an unnatural reaction that has bedeviled chemical catalysis. Catalytic anti-Markovnikov oxidation of alkene feedstocks could simplify synthetic routes to many important molecules and solve a long-standing challenge in chemistry. Here we report the engineering of a cytochrome P450 enzyme by directed evolution to catalyze metal-oxo–mediated anti-Markovnikov oxidation of styrenes with high efficiency. The enzyme uses dioxygen as the terminal oxidant and achieves selectivity for anti-Markovnikov oxidation over the kinetically favored alkene epoxidation by trapping high-energy intermediates and catalyzing an oxo transfer, including an enantioselective 1,2-hydride migration. The anti-Markovnikov oxygenase can be combined with other catalysts in synthetic metabolic pathways to access a variety of challenging anti-Markovnikov functionalization reactions.

[1]  Frances H. Arnold,et al.  Design and Evolution of Enzymes for Non-natural Chemistry , 2017 .

[2]  Frances H Arnold,et al.  Unlocking Reactivity of TrpB: A General Biocatalytic Platform for Synthesis of Tryptophan Analogues , 2017, Journal of the American Chemical Society.

[3]  Shuke Wu,et al.  Biocatalytic Formal Anti-Markovnikov Hydroamination and Hydration of Aryl Alkenes , 2017 .

[4]  Mahima Sharma,et al.  A reductive aminase from Aspergillus oryzae , 2017, Nature Chemistry.

[5]  S. Shima,et al.  A conserved threonine prevents self-intoxication of enoyl-thioester reductases. , 2017, Nature chemical biology.

[6]  Matthew D Truppo,et al.  Biocatalysis in the Pharmaceutical Industry: The Need for Speed. , 2017, ACS medicinal chemistry letters.

[7]  Patrik R. Jones,et al.  Synthetic metabolism: metabolic engineering meets enzyme design. , 2017, Current opinion in chemical biology.

[8]  Nicholas J Turner,et al.  Imine reductases (IREDs). , 2017, Current opinion in chemical biology.

[9]  A. Lei,et al.  Visible-Light-Mediated Anti-Markovnikov Hydration of Olefins , 2017 .

[10]  Lorna J. Hepworth,et al.  Constructing Biocatalytic Cascades: In Vitro and in Vivo Approaches to de Novo Multi-Enzyme Pathways , 2017 .

[11]  Jieping Zhu,et al.  Organocatalytic Enantioselective Vinylogous Pinacol Rearrangement Enabled by Chiral Ion Pairing. , 2016, Angewandte Chemie.

[12]  M. Beller,et al.  Hydrogenation of Esters to Alcohols Catalyzed by Defined Manganese Pincer Complexes. , 2016, Angewandte Chemie.

[13]  R. Grubbs,et al.  Catalytic Anti-Markovnikov Transformations of Hindered Terminal Alkenes Enabled by Aldehyde-Selective Wacker-Type Oxidation. , 2016, Journal of the American Chemical Society.

[14]  F. Arnold,et al.  A Panel of TrpB Biocatalysts Derived from Tryptophan Synthase through the Transfer of Mutations that Mimic Allosteric Activation. , 2016, Angewandte Chemie.

[15]  Ashutosh Kumar Singh,et al.  Anti-Markovnikov Oxidation of β-Alkyl Styrenes with H2O as the Terminal Oxidant. , 2016, Journal of the American Chemical Society.

[16]  R. Grubbs,et al.  Direct Access to β-Fluorinated Aldehydes by Nitrite-Modified Wacker Oxidation. , 2016, Angewandte Chemie.

[17]  Xiaoyong Du,et al.  Base-Metal-Catalyzed Regiodivergent Alkene Hydrosilylations. , 2016, Angewandte Chemie.

[18]  T. Oh,et al.  Crystal Structure of Cytochrome P450 (CYP105P2) from Streptomyces peucetius and Its Conformational Changes in Response to Substrate Binding , 2016, International journal of molecular sciences.

[19]  Y. Ura,et al.  Maleimide-assisted anti-Markovnikov Wacker-type oxidation of vinylarenes using molecular oxygen as a terminal oxidant. , 2016, Chemical communications.

[20]  F. Arnold,et al.  Chemomimetic biocatalysis: exploiting the synthetic potential of cofactor-dependent enzymes to create new catalysts. , 2015, Journal of the American Chemical Society.

[21]  Zheng Huang,et al.  A General, Practical Triethylborane-Catalyzed Reduction of Carbonyl Functions to Alcohols. , 2015, Chemistry.

[22]  M. Beller,et al.  Direct Ruthenium-Catalyzed Hydrogenation of Carboxylic Acids to Alcohols. , 2015, Angewandte Chemie.

[23]  Desiree Pressnitz,et al.  Biocatalysts for the formation of three- to six-membered carbo- and heterocycles. , 2015, Biotechnology advances.

[24]  S. Leimkühler,et al.  Enzyme cascade reactions: synthesis of furandicarboxylic acid (FDCA) and carboxylic acids using oxidases in tandem , 2015 .

[25]  Michael J E Sternberg,et al.  The Phyre2 web portal for protein modeling, prediction and analysis , 2015, Nature Protocols.

[26]  H. Adolfsson,et al.  Highly efficient and chemoselective zinc-catalyzed hydrosilylation of esters under mild conditions. , 2015, Chemistry.

[27]  M. Reetz,et al.  Expanding the toolbox of organic chemists: directed evolution of P450 monooxygenases as catalysts in regio- and stereoselective oxidative hydroxylation. , 2015, Chemical communications.

[28]  B. Feringa,et al.  Palladium-catalyzed anti-Markovnikov oxidation of terminal alkenes. , 2015, Angewandte Chemie.

[29]  Yang Zhang,et al.  The I-TASSER Suite: protein structure and function prediction , 2014, Nature Methods.

[30]  B. Feringa,et al.  Palladium-Catalyzed Anti-Markovnikov Oxidation of Allylic Amides to Protected β-Amino Aldehydes. , 2014, Journal of the American Chemical Society.

[31]  Huilei Yu,et al.  Unusually Broad Substrate Profile of Self‐Sufficient Cytochrome P450 Monooxygenase CYP116B4 from Labrenzia aggregata , 2014, Chembiochem : a European journal of chemical biology.

[32]  A. Nelson,et al.  Engineering aldolases as biocatalysts☆ , 2014, Current opinion in chemical biology.

[33]  Bernhard Hauer,et al.  New generation of biocatalysts for organic synthesis. , 2014, Angewandte Chemie.

[34]  R. Grubbs,et al.  Catalyst-controlled Wacker-type oxidation: facile access to functionalized aldehydes. , 2014, Journal of the American Chemical Society.

[35]  R. Grubbs,et al.  Aldehyde-selective Wacker-type oxidation of unbiased alkenes enabled by a nitrite co-catalyst. , 2013, Angewandte Chemie.

[36]  B. Feringa,et al.  Palladium-catalyzed selective anti-Markovnikov oxidation of allylic esters. , 2013, Angewandte Chemie.

[37]  A. Munro,et al.  Unusual Cytochrome P450 Enzymes and Reactions* , 2013, The Journal of Biological Chemistry.

[38]  G. Sprenger,et al.  CC bond formation using ThDP-dependent lyases. , 2013, Current opinion in chemical biology.

[39]  Manfred T Reetz,et al.  Reducing codon redundancy and screening effort of combinatorial protein libraries created by saturation mutagenesis. , 2013, ACS synthetic biology.

[40]  I. Arends,et al.  Enantioselective oxidation of aldehydes catalyzed by alcohol dehydrogenase. , 2012, Angewandte Chemie.

[41]  R. Grubbs,et al.  Efficient and highly aldehyde selective Wacker oxidation. , 2012, Organic letters.

[42]  A. Chowdhury,et al.  An iron catalyzed regioselective oxidation of terminal alkenes to aldehydes. , 2012, Chemical communications.

[43]  C. Che,et al.  Selective oxidation of terminal aryl and aliphatic alkenes to aldehydes catalyzed by iron(III) porphyrins with triflate as a counter anion. , 2011, Chemical communications.

[44]  R. Grubbs,et al.  Primary Alcohols from Terminal Olefins: Formal Anti-Markovnikov Hydration via Triple Relay Catalysis , 2011, Science.

[45]  A. Bommarius,et al.  Enantioenriched compounds via enzyme-catalyzed redox reactions. , 2011, Chemical reviews.

[46]  D. Gamenara,et al.  C-C bond-forming lyases in organic synthesis. , 2011, Chemical reviews.

[47]  Manfred T Reetz,et al.  Laboratory evolution of stereoselective enzymes: a prolific source of catalysts for asymmetric reactions. , 2011, Angewandte Chemie.

[48]  Eric N. Jacobsen,et al.  Attractive noncovalent interactions in asymmetric catalysis: Links between enzymes and small molecule catalysts , 2010, Proceedings of the National Academy of Sciences.

[49]  D. Sherman,et al.  Selective oxidation of carbolide C–H bonds by an engineered macrolide P450 mono-oxygenase , 2009, Proceedings of the National Academy of Sciences.

[50]  F. Guengerich,et al.  Measurement of cytochrome P450 and NADPH–cytochrome P450 reductase , 2009, Nature Protocols.

[51]  B. Feringa,et al.  Aldehyde selective Wacker oxidations of phthalimide protected allylic amines: a new catalytic route to beta3-amino acids. , 2009, Journal of the American Chemical Society.

[52]  D. G. Gibson,et al.  Enzymatic assembly of DNA molecules up to several hundred kilobases , 2009, Nature Methods.

[53]  Stephen P. Thomas,et al.  Asymmetric hydroboration of 1,1-disubstituted alkenes. , 2009, Angewandte Chemie.

[54]  C. Che,et al.  Ruthenium porphyrin-catalyzed aerobic oxidation of terminal aryl alkenes to aldehydes by a tandem epoxidation-isomerization pathway. , 2008, Angewandte Chemie.

[55]  Manfred T Reetz,et al.  Iterative saturation mutagenesis (ISM) for rapid directed evolution of functional enzymes , 2007, Nature Protocols.

[56]  B. Golding,et al.  Radical enzymes in anaerobes. , 2006, Annual review of microbiology.

[57]  Karl Matos,et al.  Boron reagents in process chemistry: Excellent tools for selective reductions. , 2006, Chemical reviews.

[58]  Joseph A. Wright,et al.  Novel anti-Markovnikov regioselectivity in the Wacker reaction of styrenes. , 2006, Chemistry.

[59]  J. Iqbal,et al.  Recent advances in transition metal catalyzed oxidation of organic substrates with molecular oxygen. , 2005, Chemical reviews.

[60]  Huimin Zhao,et al.  Directed evolution of specific receptor-ligand pairs for use in the creation of gene switches. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[61]  C. Che,et al.  A practical and mild method for the highly selective conversion of terminal alkenes into aldehydes through epoxidation-isomerization with ruthenium(IV)-porphyrin catalysts. , 2004, Angewandte Chemie.

[62]  S. Shaik,et al.  How do aldehyde side products occur during alkene epoxidation by cytochrome P450? Theory reveals a state-specific multi-state scenario where the high-spin component leads to all side products. , 2004, Journal of inorganic biochemistry.

[63]  M. Beller,et al.  Catalytic Markovnikov and anti-Markovnikov functionalization of alkenes and alkynes: recent developments and trends. , 2004, Angewandte Chemie.

[64]  W. Charman,et al.  Structure-activity relationships of the antimalarial agent artemisinin. 7. Direct modification of (+)-artemisinin and in vivo antimalarial screening of new, potential preclinical antimalarial candidates. , 2002, Journal of medicinal chemistry.

[65]  W. Engel Detection of a "nonaromatic" NIH shift during in vivo metabolism of the monoterpene carvone in humans. , 2002, Journal of agricultural and food chemistry.

[66]  B. Trost,et al.  A catalytic asymmetric Wagner-Meerwein shift. , 2001, Journal of the American Chemical Society.

[67]  S. Shaik,et al.  Multi-state epoxidation of ethene by cytochrome P450: a quantum chemical study. , 2001, Journal of the American Chemical Society.

[68]  G. Schulz,et al.  Enzyme Mechanisms for Polycyclic Triterpene Formation. , 2000, Angewandte Chemie.

[69]  F. Arnold Design by Directed Evolution , 1998 .

[70]  Joseph Haggin,et al.  Chemists Seek Greater Recognition for Catalysis , 1993 .

[71]  P. Ortiz de Montellano,et al.  Cytochrome P450cam-catalyzed oxidation of a hypersensitive radical probe. , 1992, Archives of biochemistry and biophysics.

[72]  T. C. Bruice,et al.  Mechanism of alkene epoxidation by iron, chromium, and manganese higher valent oxo-metalloporphyrins , 1992 .

[73]  Scott R. Wilson,et al.  Enantioselective Epoxidation of Unfunctionalized Olefins Catalyzed by (salen)Manganese Complexes , 1990 .

[74]  K. A. Joergensen Transition-metal-catalyzed epoxidations , 1989 .

[75]  Richard H. Holm,et al.  Metal-centered oxygen atom transfer reactions , 1987 .

[76]  D. Mansuy,et al.  Oxidation of monosubstituted olefins by cytochromes P-450 and heme models: evidence for the formation of aldehydes in addition to epoxides and allylic alcohols. , 1984, Biochemical and biophysical research communications.

[77]  J. Groves,et al.  Catalytic asymmetric epoxidations with chiral iron porphyrins , 1983 .

[78]  David J. Miller,et al.  Sesquiterpene synthases: passive catalysts or active players? , 2012, Natural product reports.

[79]  T. Schwede,et al.  Protein structure homology modeling using SWISS-MODEL workspace , 2008, Nature Protocols.