Genome-Wide Identi cation and Expression Pro le Analysis of WRKY Family Genes in Teak (Tectona Grandis)

[1]  Sean R. Johnson,et al.  A chromosomal-scale genome assembly of Tectona grandis reveals the importance of tandem gene duplication and enables discovery of genes in natural product biosynthetic pathways , 2019, GigaScience.

[2]  Xia He,et al.  Genome-wide Analysis of the WRKY Gene Family and its Response to Abiotic Stress in Buckwheat (Fagopyrum Tataricum) , 2019, Open life sciences.

[3]  I. Somssich,et al.  Principles and characteristics of the Arabidopsis WRKY regulatory network during early MAMP-triggered immunity. , 2018, The Plant journal : for cell and molecular biology.

[4]  Yehua He,et al.  Genome-wide investigation of WRKY gene family in pineapple: evolution and expression profiles during development and stress , 2018, BMC Genomics.

[5]  R. Vasudeva,et al.  Draft genome of a high value tropical timber tree, Teak (Tectona grandis L. f): insights into SSR diversity, phylogeny and conservation , 2018, DNA research : an international journal for rapid publication of reports on genes and genomes.

[6]  Lina Jiang,et al.  Overexpression of TaWRKY146 Increases Drought Tolerance through Inducing Stomatal Closure in Arabidopsis thaliana , 2017, Front. Plant Sci..

[7]  Yuan Qin,et al.  The WRKY Transcription Factor Family in Model Plants and Crops , 2017 .

[8]  Linhai Wang,et al.  Genome-wide analysis of WRKY gene family in the sesame genome and identification of the WRKY genes involved in responses to abiotic stresses , 2017, BMC Plant Biology.

[9]  Kazutaka Katoh,et al.  MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization , 2017, Briefings Bioinform..

[10]  Liwang Liu,et al.  Genome-wide characterization of the WRKY gene family in radish (Raphanus sativus L.) reveals its critical functions under different abiotic stresses , 2017, Plant Cell Reports.

[11]  M. H. Bodanese-Zanettini,et al.  The differential expression of soybean [Glycine max (L.) Merrill] WRKY genes in response to water deficit. , 2016, Plant physiology and biochemistry : PPB.

[12]  Lior Pachter,et al.  Near-optimal probabilistic RNA-seq quantification , 2016, Nature Biotechnology.

[13]  Yan Yan,et al.  Genome-Wide Identification and Expression Analysis of the WRKY Gene Family in Cassava , 2016, Front. Plant Sci..

[14]  Bo Hu,et al.  GSDS 2.0: an upgraded gene feature visualization server , 2014, Bioinform..

[15]  Guy Baele,et al.  Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous–Paleogene boundary , 2014, Genome research.

[16]  Shuxun Yu,et al.  Genome-wide analysis of the WRKY gene family in cotton , 2014, Molecular Genetics and Genomics.

[17]  Mario Pezzotti,et al.  Genome and transcriptome analysis of the grapevine (Vitis vinifera L.) WRKY gene family , 2014, Horticulture Research.

[18]  Yeting Zhang,et al.  A genome triplication associated with early diversification of the core eudicots , 2012, Genome Biology.

[19]  D. Xie,et al.  Molecular Phylogenetic and Expression Analysis of the Complete WRKY Transcription Factor Family in Maize , 2012, DNA research : an international journal for rapid publication of reports on genes and genomes.

[20]  Sanwen Huang,et al.  Genome-wide analysis of WRKY gene family in Cucumis sativus , 2011, BMC Genomics.

[21]  Parinita Agarwal,et al.  WRKY: its structure, evolutionary relationship, DNA-binding selectivity, role in stress tolerance and development of plants , 2011, Molecular Biology Reports.

[22]  Robert D. Finn,et al.  HMMER web server: interactive sequence similarity searching , 2011, Nucleic Acids Res..

[23]  Han Chen,et al.  Roles of arabidopsis WRKY18, WRKY40 and WRKY60 transcription factors in plant responses to abscisic acid and abiotic stress , 2010, BMC Plant Biology.

[24]  Jun Yu,et al.  KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies , 2010, Genom. Proteom. Bioinform..

[25]  Steven J. M. Jones,et al.  Circos: an information aesthetic for comparative genomics. , 2009, Genome research.

[26]  Mikael Bodén,et al.  MEME Suite: tools for motif discovery and searching , 2009, Nucleic Acids Res..

[27]  S. Chen,et al.  Soybean WRKY-type transcription factor genes, GmWRKY13, GmWRKY21, and GmWRKY54, confer differential tolerance to abiotic stresses in transgenic Arabidopsis plants. , 2008, Plant biotechnology journal.

[28]  M. V. Van Verk,et al.  A Novel WRKY Transcription Factor Is Required for Induction of PR-1a Gene Expression by Salicylic Acid and Bacterial Elicitors[C][W] , 2008, Plant Physiology.

[29]  Christian A. Ross,et al.  The WRKY Gene Family in Rice (Oryza sativa) , 2007 .

[30]  M. Kanninen,et al.  Stand growth scenarios for Tectona grandis plantations in Costa Rica , 2005 .

[31]  Steven B Cannon,et al.  The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana , 2004, BMC Plant Biology.

[32]  Imre E Somssich,et al.  Members of the Arabidopsis WRKY group III transcription factors are part of different plant defense signaling pathways. , 2003, Molecular plant-microbe interactions : MPMI.

[33]  Z. Gu,et al.  Extent of gene duplication in the genomes of Drosophila, nematode, and yeast. , 2002, Molecular biology and evolution.

[34]  E. Holub The arms race is ancient history in Arabidopsis, the wildflower , 2001, Nature Reviews Genetics.

[35]  M. A. Koch,et al.  Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae). , 2000, Molecular biology and evolution.

[36]  T. Eulgem,et al.  The WRKY superfamily of plant transcription factors. , 2000, Trends in plant science.

[37]  S. Ishiguro,et al.  Characterization of a cDNA encoding a novel DNA-binding protein, SPF1, that recognizes SP8 sequences in the 5′ upstream regions of genes coding for sporamin and β-amylase from sweet potato , 1994, Molecular and General Genetics MGG.

[38]  M. Kleine,et al.  The Global Teak Study Analysis , Evaluation and Future Potential of Teak Resources , 2017 .

[39]  Wangdan Xiong,et al.  Genome-wide analysis of the WRKY gene family in physic nut (Jatropha curcas L.). , 2013, Gene.

[40]  Jing Li,et al.  The WRKY family of transcription factors in rice and Arabidopsis and their origins. , 2005, DNA research : an international journal for rapid publication of reports on genes and genomes.

[41]  Zhixiang Chen,et al.  Expression profiles of the Arabidopsis WRKY gene superfamily during plant defense response , 2004, Plant Molecular Biology.

[42]  D. Pandey,et al.  Teak: a global overview , 2000 .