The effects of cytosine methylation on general transcription factors
暂无分享,去创建一个
[1] J. Ecker,et al. Exceptional epigenetics in the brain , 2015, Science.
[2] Wei Li,et al. MeCP2 binds to non-CG methylated DNA as neurons mature, influencing transcription and the timing of onset for Rett syndrome , 2015, Proceedings of the National Academy of Sciences.
[3] Harrison W. Gabel,et al. Disruption of DNA methylation-dependent long gene repression in Rett syndrome , 2015, Nature.
[4] X. Su,et al. High-accuracy mapping of protein binding stability on nucleosomal DNA using a single-molecule method. , 2014, Journal of molecular cell biology.
[5] L. Hesson,et al. The evidence for functional non-CpG methylation in mammalian cells , 2014, Epigenetics.
[6] Ruiqiang Li,et al. Whole-genome analysis of 5-hydroxymethylcytosine and 5-methylcytosine at base resolution in the human brain , 2014, Genome Biology.
[7] Hao Wu,et al. Reversing DNA Methylation: Mechanisms, Genomics, and Biological Functions , 2014, Cell.
[8] Guoping Fan,et al. Distribution, recognition and regulation of non-CpG methylation in the adult mammalian brain , 2013, Nature Neuroscience.
[9] R. Gordân,et al. Protein–DNA binding: complexities and multi-protein codes , 2013, Nucleic acids research.
[10] J. Cidlowski,et al. The biology of the glucocorticoid receptor: new signaling mechanisms in health and disease. , 2013, The Journal of allergy and clinical immunology.
[11] Matthew D. Schultz,et al. Global Epigenomic Reconfiguration During Mammalian Brain Development , 2013, Science.
[12] Saurabh Sinha,et al. Program in Gene Function and Expression Publications and Presentations Program in Gene Function and Expression 9-2013 Widespread evidence of cooperative DNA binding by transcription factors in Drosophila development , 2014 .
[13] H. Sasaki,et al. Mouse Oocyte Methylomes at Base Resolution Reveal Genome-Wide Accumulation of Non-CpG Methylation and Role of DNA Methyltransferases , 2013, PLoS genetics.
[14] Lijiang Yang,et al. Probing Allostery Through DNA , 2013, Science.
[15] D. Crothers. Fine Tuning Gene Regulation , 2013, Science.
[16] P. Waddell,et al. Effects of DNA methylation on nucleosome stability , 2013, Nucleic acids research.
[17] P. Defossez,et al. On how mammalian transcription factors recognize methylated DNA , 2013, Epigenetics.
[18] Lan-fen Li,et al. Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic helix-loop-helix domains with E-box DNA , 2012, Cell Research.
[19] H. Sasaki,et al. Accumulation and loss of asymmetric non-CpG methylation during male germ-cell development , 2012, Nucleic acids research.
[20] Xiaodong Cheng,et al. An atomic model of Zfp57 recognition of CpG methylation within a specific DNA sequence. , 2012, Genes & development.
[21] N. Datson,et al. A genome-wide signature of glucocorticoid receptor binding in neuronal PC12 cells , 2012, BMC Neuroscience.
[22] H. Dyson,et al. Molecular basis for recognition of methylated and specific DNA sequences by the zinc finger protein Kaiso , 2012, Proceedings of the National Academy of Sciences.
[23] Christoph Bock,et al. Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk , 2012, Genome research.
[24] M. Robinson,et al. Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA , 2012, Genome research.
[25] B. Ren,et al. Base-Resolution Analyses of Sequence and Parent-of-Origin Dependent DNA Methylation in the Mouse Genome , 2012, Cell.
[26] Ju Yeon Lee,et al. Effects of DNA methylation on the structure of nucleosomes. , 2012, Journal of the American Chemical Society.
[27] Vijay K. Tiwari,et al. DNA-binding factors shape the mouse methylome at distal regulatory regions , 2011, Nature.
[28] J. Stamatoyannopoulos,et al. DNA methylation status predicts cell type‐specific enhancer activity , 2011, The EMBO journal.
[29] Felix Krueger,et al. Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications , 2011, Bioinform..
[30] R. Stewart,et al. Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells , 2011, Nature.
[31] Julie A. Law,et al. A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo. , 2011, Genes & development.
[32] Chia-Lin Wei,et al. Dynamic changes in the human methylome during differentiation. , 2010, Genome research.
[33] Julie A. Law,et al. Establishing, maintaining and modifying DNA methylation patterns in plants and animals , 2010, Nature Reviews Genetics.
[34] Lee E. Edsall,et al. Human DNA methylomes at base resolution show widespread epigenomic differences , 2009, Nature.
[35] K. Yamamoto,et al. DNA Binding Site Sequence Directs Glucocorticoid Receptor Structure and Activity , 2009, Science.
[36] Yusuke Nakamura,et al. Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism , 2008, Nature.
[37] R. Lister,et al. Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis , 2008, Cell.
[38] B. McEwen,et al. Steroid hormone receptor expression and function in microglia , 2008, Glia.
[39] N. Datson,et al. Central corticosteroid actions: Search for gene targets. , 2008, European journal of pharmacology.
[40] S. Nelson,et al. Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning , 2008, Nature.
[41] A. Bird,et al. MeCP2 binding to DNA depends upon hydration at methyl-CpG. , 2008, Molecular cell.
[42] Y. Matsui,et al. Epigenetic events in mammalian germ-cell development: reprogramming and beyond , 2008, Nature Reviews Genetics.
[43] E. Schröder,et al. Stacking interactions and the twist of DNA. , 2008, Journal of the American Chemical Society.
[44] Kevin Cowtan,et al. research papers Acta Crystallographica Section D Biological , 2005 .
[45] K. Yamamoto,et al. Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA , 2003, Nature.
[46] W. Olson,et al. 3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures. , 2003, Nucleic acids research.
[47] M. Morimoto,et al. Distribution of glucocorticoid receptor immunoreactivity and mRNA in the rat brain: an immunohistochemical and in situ hybridization study , 1996, Neuroscience Research.
[48] John W. R. Schwabe,et al. The crystal structure of the estrogen receptor DNA-binding domain bound to DNA: How receptors discriminate between their response elements , 1993, Cell.
[49] C. Hunter,et al. Sequence-dependent DNA structure. The role of base stacking interactions. , 1993, Journal of molecular biology.
[50] J. Levine,et al. Type II glucocorticoid receptors are expressed in oligodendrocytes and astrocytes , 1990, Journal of neuroscience research.
[51] T. Straatsma,et al. THE MISSING TERM IN EFFECTIVE PAIR POTENTIALS , 1987 .
[52] H. Berendsen,et al. Molecular dynamics with coupling to an external bath , 1984 .
[53] G. Fan,et al. DNA Methylation and Its Basic Function , 2013, Neuropsychopharmacology.
[54] Carmel Reilly,et al. A determining influence for CpG dinucleotides on nucleosome positioning in vitro. , 2004, Nucleic acids research.
[55] Sara Abdulla,et al. Circadian clocks , 1999, Nature.