Smoothing lung segmentation surfaces in three-dimensional X-ray CT images using anatomic guidance.

RATIONALE AND OBJECTIVES Automatic lung segmentation in volumetric computed tomography (CT) images has been extensively investigated, and several methods have been proposed. Most methods distinguish the lung parenchyma from the surrounding anatomy based on the difference in CT attenuation values. This leads to an irregular and inconsistent lung boundary for the regions near the mediastinum, which can cause inconsistent boundaries both across subjects and within subjects scanned at different intervals of time. Processes like lung image registration and lung atlas construction can be affected by such inconsistencies. Therefore there is a need for a more consistent lung surface near the mediastinum. MATERIALS AND METHODS This paper presents a fully automatic method for the three-dimensional smoothing of the lung boundary using information from the segmented human airway tree. First, using the segmented airway tree, we define a bounding box around the mediastinum for each lung, within which all operations are performed. We then define all generations of the airway tree distal to the right and left main stem bronchi to be part of the respective lungs and exclude all other segments. Finally, we perform a fast morphological closing with an ellipsoidal kernel to smooth the surface of the lung. RESULTS This method has been tested by processing the segmented lungs from eight normal datasets. The mean value of the magnitude of curvedness of the lung contours, averaged over all the datasets, is 0.13 postsmoothing, compared with 4.91 before smoothing. The accuracy of the lung contours after smoothing is assessed by comparing the automatic results to manually traced smooth lung borders by a human analyst. Averaged over all volumes, the root mean square difference between human and computer borders is 0.8691 mm after smoothing, compared with 1.3012 mm before smoothing. The mean similarity index, which is an area overlap measure based on the kappa statistic, is 0.9958 (SD 0.0032), after smoothing. CONCLUSIONS We have described a novel scheme for smoothing the lung contour around the mediastinum. The method is based on using anatomic information from the segmented airway tree. The validation results show that there is good agreement between manual and computer results. Because there are no accepted criteria for defining the lung boundary near the mediastinum, we believe our method of defining the boundary based on the structure of the airway tree provides a good basis for three-dimensional smoothing.

[1]  Milan Sonka,et al.  Quantitative Analysis of Intrathoracic Airway Trees: Methods and Validation , 2003, IPMI.

[2]  D. Altman,et al.  STATISTICAL METHODS FOR ASSESSING AGREEMENT BETWEEN TWO METHODS OF CLINICAL MEASUREMENT , 1986, The Lancet.

[3]  Yongmin Kim,et al.  A methodology for evaluation of boundary detection algorithms on medical images , 1997, IEEE Transactions on Medical Imaging.

[4]  Eric A. Hoffman,et al.  Automatic lung segmentation for accurate quantitation of volumetric X-ray CT images , 2001, IEEE Transactions on Medical Imaging.

[5]  Michael F. McNitt-Gray,et al.  Method for segmenting chest CT image data using an anatomical model: preliminary results , 1997, IEEE Transactions on Medical Imaging.

[6]  Joseph M. Reinhardt,et al.  Smoothing lung segmentation surfaces in 3D x-ray CT images using anatomic guidance , 2004, SPIE Medical Imaging.

[7]  A. Beckett,et al.  AKUFO AND IBARAPA. , 1965, Lancet.

[8]  M. Kallergi,et al.  Improved method for automatic identification of lung regions on chest radiographs. , 2001 .

[9]  S. Armato,et al.  Computerized detection of pulmonary nodules on CT scans. , 1999, Radiographics : a review publication of the Radiological Society of North America, Inc.

[10]  Andrea J. van Doorn,et al.  Surface shape and curvature scales , 1992, Image Vis. Comput..

[11]  Benoit M. Dawant,et al.  Automatic 3-D segmentation of internal structures of the head in MR images using a combination of similarity and free-form transformations. I. Methodology and validation on normal subjects , 1999, IEEE Transactions on Medical Imaging.

[12]  Benoit M. Dawant,et al.  Automatic 3D segmentation of internal structures of the head in MR images using a combination of similarity and free-form transformations , 1998, Medical Imaging.