Application of the sequential t-test algorithm for analysing regime shifts to the southern Benguela ecosystem

Long-term ecosystem changes, such as regime shifts, have occurred in several marine ecosystems world-wide. Multivariate statistical methods have been used to detect such changes. A new method known as the sequential t-test algorithm for analysing regime shifts (STARS) is applied to a set of biological state variables as well as environmental and anthropogenic forcing variables in the southern Benguela. The method is able to correct for auto-correlation within time-series by a process known as prewhitening. All variables were tested with and without prewhitening. Shifts that were detected with both methods were termed robust. The STARS method detected shifts in relatively short time-series and identified when these shifts occurred without a priori hypotheses. Shifts were generally well detected at the end of time-series, but further development of the method is needed to enhance its performance for auto-correlated time-series. Since 1950, two major long-term ecosystem changes were identified for the southern Benguela. The first change occurred during the 1960s, caused predominantly by heavy fishing pressure but with some environmental forcing. The second change occurred in the early 2000s, caused mainly by environmental forcing. To strengthen these findings, further analyses should be carried out using different methods.

[1]  P. A. Larkin Concepts and issues in marine ecosystem management , 1996, Reviews in Fish Biology and Fisheries.

[2]  Cd van der Lingen,et al.  Diet of sardine Sardinops sagax in the southern Benguela upwelling ecosystem , 2002 .

[3]  G. Daskalov,et al.  Relating sardine Sardinops sagax abundance to environmental indices in northern Benguela [review article] , 2003 .

[4]  Claude Roy,et al.  Extreme oceanographic events recorded in the Southern Benguela during the 1999-2000 summer season , 2001 .

[5]  Ruth P. Mack,et al.  Long-Term Trends , 2011 .

[6]  L. Shannon Trophic models of the Benguela upwelling system : towards an ecosystem approach to fisheries management , 2000 .

[7]  C. van der Lingen,et al.  Comparative trophodynamics of anchovy Engraulis encrasicolus and sardine Sardinops sagax in the southern Benguela: are species alternations between small pelagic fish trophodynamically mediated? , 2006 .

[8]  A. Jarre,et al.  Regime Shifts, Ecological Aspects , 2008 .

[9]  L. Shannon Benguela : predicting a large marine ecosystem , 2006 .

[10]  L. Shannon,et al.  Ecosystem approach to fisheries management in the northern Benguela: the Namibian experience , 2004 .

[11]  I. Hampton,et al.  An overview of the living marine resources of Namibia , 2001 .

[12]  Stuart,et al.  Ecosystem approach to fisheries , 2009 .

[13]  S. Carpenter,et al.  Catastrophic shifts in ecosystems , 2001, Nature.

[14]  C. van der Lingen,et al.  Abrupt environmental shift associated with changes in the distribution of Cape anchovy Engraulis encrasicolus spawners in the southern Benguela , 2007 .

[15]  Michael J. Miller,et al.  Oceanic changes in the Sargasso Sea and declines in recruitment of the European eel , 2007 .

[16]  K. Broad,et al.  Environmental ‘loopholes’ and fish population dynamics: comparative pattern recognition with focus on El Niño effects in the Pacific , 2003 .

[17]  C. Reason,et al.  10 Influences of large scale climate modes and agulhas system variability on the BCLME region , 2006 .

[18]  S. Rodionov A sequential algorithm for testing climate regime shifts , 2004 .

[19]  Ginger A. Rebstock Climatic regime shifts and decadal‐scale variability in calanoid copepod populations off southern California , 2002 .

[20]  A. J. Williams,et al.  Seabird consumption and production in the Benguela and Western Agulhas ecosystems , 1991 .

[21]  Patricia A. Livingston,et al.  Ecosystem Change and the Decline of Marine Mammals in the Eastern Bering Sea : Testing the Ecosystem Shift and Commercial Whaling Hypotheses , 1999 .

[22]  A. Maccall,et al.  World-wide fluctuations of sardine and anchovy stocks: the regime problem , 1989 .

[23]  C. van der Lingen,et al.  Density-dependent changes in reproductive parameters and condition of southern Benguela sardine Sardinops sagax , 2006 .

[24]  Michael A. Litzow Climate regime shifts and community reorganization in the Gulf of Alaska: how do recent shifts compare with 1976/1977? , 2006 .

[25]  P. Glynn EL NIÑO—SOUTHERN OSCILLATION 1982-1983: NEARSHORE POPULATION, COMMUNITY, AND ECOSYSTEM RESPONSES , 1988 .

[26]  K. Cochrane,et al.  The 1980s – a decade of change in the Benguela ecosystem , 1992 .

[27]  Grégory Beaugrand,et al.  The North Sea regime shift: Evidence, causes, mechanisms and consequences , 2004 .

[28]  Thomas M. Smith,et al.  Improved Extended Reconstruction of SST (1854–1997) , 2004 .

[29]  L. Hutchings Fish harvesting in a variable, productive environment — searching for rules or searching for exceptions? , 1992 .

[30]  Anthony J. Richardson,et al.  Long-term trends in the abundance and community structure of Coastal Zooplankton in the Southern Benguela system, 1951–1996 , 1998 .

[31]  J. Overland,et al.  Application of a sequential regime shift detection method to the Bering Sea ecosystem , 2005 .

[32]  P. C. Reid,et al.  Plankton effect on cod recruitment in the North Sea , 2003, Nature.

[33]  K. S. Chan,et al.  Cod and climate: effect of the North Atlantic Oscillation on recruitment in the North Atlantic , 2006 .

[34]  Astrid Jarre,et al.  Small pelagics in upwelling systems: patterns of interaction and structural changes in "wasp-waist" ecosystems , 2000 .

[35]  F. H. C. Marriott,et al.  BIAS IN THE ESTIMATION OF AUTOCORRELATIONS , 1954 .

[36]  D. Hedgecock,et al.  Sardine and anchovy regime fluctuations of abundance in four regions of the world oceans: a workshop report , 1992 .

[37]  John G. Field,et al.  Simulating anchovy-sardine regime shifts in the southern Benguela ecosystem , 2004 .

[38]  R. J. M. Crawford,et al.  Food and population variability in five regions supporting large stocks of anchovy, sardine and horse mackerel , 1987 .

[39]  G. Hays,et al.  Climate change and marine plankton. , 2005, Trends in ecology & evolution.

[40]  Claude Roy,et al.  Worldwide large-scale fluctuations of sardine and anchovy populations , 1999 .

[41]  L. Shannon,et al.  On the existence of an El Niño-type phenomenon in the Benguela System , 1986 .

[42]  J. McWilliams,et al.  Linking wind and interannual upwelling variability in a regional model of the southern Benguela , 2002 .

[43]  J. Coetzee,et al.  Has fishing pressure caused a major shift in the distribution of South African Sardine? ICES CM 2006/B:11 , 2006 .

[44]  M. Armstrong,et al.  Long-term trends in patterns of maturity in the southern Benguela pilchard population: evidence for density-dependence? , 1989 .

[45]  M. Barangé,et al.  Multiple factors affecting South African anchovy recruitment in the spawning, transport and nursery areas , 1998 .

[46]  Astrid Jarre,et al.  Trophic flows in the southern Benguela during the 1980s and 1990s , 2003 .

[47]  W. Sydeman,et al.  Rockfish response to low-frequency ocean climate change as revealed by the diet of a marine bird over multiple time scales , 2004 .

[48]  K. Cochrane,et al.  SOUTH AFRICA'S OFFSHORE LIVING MARINE RESOURCES: THE SCIENTIFIC BASIS FOR MANAGEMENT OF THE FISHERIES , 1997 .

[49]  Donald B. Percival,et al.  Regime shifts and red noise in the North Pacific , 2006 .

[50]  T. Gammelsrød,et al.  Intrusion of warm surface water along the Angolan-Namibian coast in February–March 1995: the 1995 Benguela Nino , 1998 .

[51]  J. Jahncke,et al.  Comparison of trends in abundance of guano-producing seabirds in Peru and Southern Africa , 1999 .

[52]  Nathan J. Mantua,et al.  Methods for detecting regime shifts in large marine ecosystems: a review with approaches applied to North Pacific data , 2004 .

[53]  Steven R. Hare,et al.  Empirical evidence for North Pacific regime shifts in 1977 and 1989 , 2000 .

[54]  J. G. Field,et al.  Contributions of the Benguela ecology programme to pelagic fisheries management in South Africa , 2004 .

[55]  Miguel Ñiquen,et al.  Regime shifts in the Humboldt Current ecosystem , 2004 .

[56]  Sergei N. Rodionov,et al.  Use of prewhitening in climate regime shift detection , 2006 .

[57]  F. L. Clus Impact and implications of large-scale environmental anomalies on the spatial distribution of spawning of the Namibian pilchard and anchovy populations , 1990 .