Anaerospora hongkongensis Gen. Nov. Sp. Nov., a Novel Genus and Species with Ribosomal DNA Operon Heterogeneity Isolated from an Intravenous Drug Abuser with Pseudobacteremia

A bacterium was isolated from the blood culture of an intravenous drug abuser with pseudobacteremia. The cells were strictly anaerobic, straight or slightly curved, sporulating, Gram‐negative rods. It grew on sheep blood agar as non‐hemolytic, pinpoint colonies after 48 hr of incubation at 37 C in an anaerobic environment. It was motile but did not produce catalase or cytochrome oxidase. 16S ribosomal DNA (rDNA) sequencing revealed three different copies of 16S rDNA sequences. More than 90% of the differences among them were due to differences in the lengths of the sequences. Phylogenetically, the bacterium is clustered with Dendrosporobacter, Sporomusa, and Propionispora, the other three genera of anaerobic, sporulating, Gram‐negative rods. There were 8.6–11.1% differences between the 16S rDNA sequences of the bacterium and that of D. quercicolus, 4.7–15.1% differences between the 16S rDNA sequences of it and those of S. acidovorans, S. aerivorans, S. malonica, S. ovata, S. paucivorans, S. silvacetica, S. spaeroides, and S. termitida, and 7.6–13.1% differences between the 16S rDNA sequences of it and those of P. hippei and P. vibrioides. The G+C content of the bacterium (mean±SD) was 46.8±3.2%. For these reasons, a new genus and species, Anaerospora hongkongensis gen. nov. sp. nov., is proposed, for which HKU15T is the type strain.

[1]  B. J. Cosenza,et al.  Clostridium quercicolum sp.n., isolated from discolored tissues in living oak trees , 2005, Antonie van Leeuwenhoek.

[2]  P. Woo,et al.  Streptococcus sinensis may react with Lancefield group F antiserum. , 2004, Journal of medical microbiology.

[3]  P. Woo,et al.  Bacteremia in a patient with colonic carcinoma caused by a novel Sedimentibacter species: Sedimentibacter hongkongensis sp. nov. , 2004, Diagnostic microbiology and infectious disease.

[4]  K. Yuen,et al.  Eggerthella hongkongensis sp. nov. and eggerthella sinensis sp. nov., two novel Eggerthella species, account for half of the cases of Eggerthella bacteremia. , 2004, Diagnostic microbiology and infectious disease.

[5]  P. Woo,et al.  Association of Laribacter hongkongensis in community-acquired gastroenteritis with travel and eating fish: a multicentre case-control study , 2004, The Lancet.

[6]  K. Nishimura,et al.  Nocardia testaceus Sp. Nov. and Nocardia senatus Sp. Nov., Isolated from Patients in Japan , 2004, Microbiology and immunology.

[7]  P. Woo,et al.  Tsukamurella Conjunctivitis: a Novel Clinical Syndrome , 2003, Journal of Clinical Microbiology.

[8]  Susanna K. P. Lau,et al.  Usefulness of the MicroSeq 500 16S Ribosomal DNA-Based Bacterial Identification System for Identification of Clinically Significant Bacterial Isolates with Ambiguous Biochemical Profiles , 2003, Journal of Clinical Microbiology.

[9]  B. Gay,et al.  Phylogenetic analysis of some Sporomusa sub-branch members isolated from human clinical specimens: description of Megasphaera micronuciformis sp. nov. , 2003, International journal of systematic and evolutionary microbiology.

[10]  K. Yuen,et al.  Pseudobacteraemia in a patient with neutropenic fever caused by a novel paenibacillus species: Paenibacillus hongkongensis sp. nov. , 2003, Molecular Pathology.

[11]  P. Woo,et al.  Actinomyces hongkongensis sp. nov. a novel Actinomyces species isolated from a patient with pelvic actinomycosis. , 2003, Systematic and applied microbiology.

[12]  P. Woo,et al.  Streptococcus sinensis sp. nov., a Novel Species Isolated from a Patient with Infective Endocarditis , 2002, Journal of Clinical Microbiology.

[13]  Susanna K. P. Lau,et al.  Identification by 16S rRNA Gene Sequencing of Lactobacillus salivarius Bacteremic Cholecystitis , 2002, Journal of Clinical Microbiology.

[14]  K. Yuen,et al.  Laribacterhongkongensis gen. nov., sp. nov., a Novel Gram-Negative Bacterium Isolated from a Cirrhotic Patient with Bacteremia and Empyema , 2001, Journal of Clinical Microbiology.

[15]  P. Woo,et al.  Cell-wall-deficient bacteria and culture-negative febrile episodes in bone-marrow-transplant recipients , 2001, The Lancet.

[16]  P. Woo,et al.  Acupuncture mycobacteriosis. , 2001, The New England journal of medicine.

[17]  R. Amann,et al.  Direct proof for the presence and expression of two 5% different 16S rRNA genes in individual cells of Haloarcula marismortui , 2000, Extremophiles.

[18]  H. Biebl,et al.  Propionispora vibrioides, nov. gen., nov. sp., a new gram-negative, spore-forming anaerobe that ferments sugar alcohols , 2000, Archives of Microbiology.

[19]  K. Yuen,et al.  Identification of Mycobacterium neoaurumIsolated from a Neutropenic Patient with Catheter-Related Bacteremia by 16S rRNA Sequencing , 2000, Journal of Clinical Microbiology.

[20]  T. Ezaki,et al.  Burkholderia uboniae Sp. Nov., l‐Arabinose‐Assimilating but Different from Burkholderia thailandensis and Burkholderia vietnamiensis , 2000, Microbiology and immunology.

[21]  Y. Benno,et al.  Phylogenic and Phenotypic Characterization of Some Eubacterium‐Like Isolates from Human Feces: Description of Solobacterium moorei Gen. Nov., Sp. Nov. , 2000, Microbiology and immunology.

[22]  Y. Benno,et al.  Coprobacillus catenaformis Gen. Nov., Sp. Nov., a New Genus and Species Isolated from Human Feces , 2000, Microbiology and immunology.

[23]  B. Tindall,et al.  Reclassification of Clostridium quercicolum as Dendrosporobacter quercicolus gen. nov., comb. nov. , 2000, International journal of systematic and evolutionary microbiology.

[24]  P. Janssen,et al.  Succinispira mobilis gen. nov., sp. nov., a succinate-decarboxylating anaerobic bacterium. , 1999, International journal of systematic bacteriology.

[25]  H. Drake,et al.  Sporomusa silvacetica sp, nov., an acetogenic bacterium isolated from aggregated forest soil. , 1997, International journal of systematic bacteriology.

[26]  R. Amann,et al.  Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis , 1996, Journal of bacteriology.

[27]  J. Thompson,et al.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.

[28]  Henry D. Isenberg,et al.  Manual of Clinical Microbiology , 1991 .

[29]  G. L. Lombard,et al.  Practical procedure for demonstrating bacterial flagella , 1982, Journal of clinical microbiology.