Mixed feeds of glycerol and methanol can improve the performance of Pichia pastoris cultures: A quantitative study based on concentration gradients in transient continuous cultures.

Transient continuous cultures constitute a means to speed up strain characterization, by avoiding the need for many time-consuming steady-state experiments. In this study, mixed substrate growth on glycerol and methanol of a Pichia pastoris strain expressing and secreting recombinant avidin was characterized quantitatively by performing a nutrient gradient with linear increase of the methanol fraction in the feed medium from 0.5 to 0.93 C-mol C-mol(-1) at a dilution rate of 0.06 h(-1). The influence of the methanol fraction in the feed medium on recombinant avidin productivity and on specific alcohol oxidase activity were also examined. Results showed that, compared with cultures on methanol as sole carbon source, the specific recombinant avidin production rate was the same provided the methanol fraction in the feed medium was higher than 0.6 C-mol C-mol(-1). The volumetric avidin production rate was even 1.1-fold higher with a methanol fraction in the feed medium of 0.62 C-mol C-mol(-1) as a result of the higher biomass yield on mixed substrate growth compared with methanol alone. Moreover, since heat production and oxygen uptake rates are lower during mixed substrate growth on glycerol and methanol, mixed substrate cultures present technical advantages for the performance of high cell density P. pastoris cultures. Results obtained in a high cell density fed-batch culture with a mixed feed of 0.65 C-mol C-mol(-1) methanol and 0.35 C-mol C-mol(-1) glycerol were in agreement with results obtained during the transient nutrient gradient.

[1]  T. Gingeras,et al.  Isolation of alcohol oxidase and two other methanol regulatable genes from the yeast Pichia pastoris , 1985, Molecular and cellular biology.

[2]  W. Babel,et al.  The growth rate-limiting reaction in methanol-assimilating yeasts. , 1990, FEMS microbiology reviews.

[3]  T. Egli,et al.  Kinetic models for the growth of Escherichia coli with mixtures of sugars under carbon-limited conditions. , 1998, Biotechnology and bioengineering.

[4]  C. Wandrey,et al.  Recombinant Protein Production with Pichia pastoris in Continuous Fermentation – Kinetic Analysis of Growth and Product Formation , 2001 .

[5]  T. Egli,et al.  Growth Kinetics of Suspended Microbial Cells: From Single-Substrate-Controlled Growth to Mixed-Substrate Kinetics , 1998, Microbiology and Molecular Biology Reviews.

[6]  J. Neuhaus,et al.  Expression and purification of a recombinant avidin with a lowered isoelectric point in Pichia pastoris. , 2003, Protein expression and purification.

[7]  M. Zinn Dual (C,N) nutrient limited growth of Pseudomonas oleovorans , 1998 .

[8]  W. Babel,et al.  Calorimetric analysis of microorganisms in transient growth states to quantify changes of metabolic fluxes in response to nutrient deficiencies and osmostress , 2002 .

[9]  L. Gustafsson,et al.  Thermodynamic considerations in constructing energy balances for cellular growth , 1993 .

[10]  A. Daugulis,et al.  A rational approach to improving productivity in recombinant Pichia pastoris fermentation. , 2001, Biotechnology and bioengineering.

[11]  A. Subramaniam,et al.  Strategies for optimal synthesis and secretion of heterologous proteins in the methylotrophic yeast Pichia pastoris. , 1997, Gene.

[12]  T. Egli,et al.  Simultaneous utilization of methanol–glucose mixtures by Hansenula polymorpha in chemostat: Influence of dilution rate and mixture composition on utilization pattern , 1986, Biotechnology and bioengineering.

[13]  Wenhui Zhang,et al.  Pichia pastoris fermentation with mixed-feeds of glycerol and methanol: growth kinetics and production improvement , 2003, Journal of Industrial Microbiology and Biotechnology.

[14]  H. Gruber,et al.  Accurate measurement of avidin and streptavidin in crude biofluids with a new, optimized biotin-fluorescein conjugate. , 1999, Biochimica et biophysica acta.

[15]  L. Gustafsson,et al.  Proposals for a standardized sample handling procedure for the determination of elemental composition and enthalpy of combustion of biological material , 1990 .

[16]  T. Egli,et al.  Regulatory flexibility of methylotrophic yeasts in chemostat cultures: Simultaneous assimilation of glucose and methanol at a fixed dilution rate , 1982, Archives of Microbiology.

[17]  William C. Raschke,et al.  Recent Advances in the Expression of Foreign Genes in Pichia pastoris , 1993, Bio/Technology.

[18]  M. Inan,et al.  The effect of ethanol and acetate on protein expression in Pichia pastoris. , 2001, Journal of bioscience and bioengineering.

[19]  A. Lübbert,et al.  Bioreactor Retrofitting to Avoid Aeration with Oxygen in Pichia Pastoris Cultivation Processes for Recombinant Protein Production , 2004 .

[20]  R. Armitage,et al.  Expression of trimeric CD40 ligand in Pichia pastoris: use of a rapid method to detect high-level expressing transformants. , 1997, Gene.

[21]  F. Schäfer,et al.  Impact of carbon dioxide evolution on the calorimetric monitoring of fermentations , 1995 .

[22]  T. Egli,et al.  Theoretical Analysis of Media Used in the Growth of Yeasts on Methanol , 1981 .

[23]  R. C. Weast Handbook of chemistry and physics , 1973 .

[24]  W. Harder,et al.  Growth of Hansenula polymorpha in a methanol-limited chemostat , 1976, Archives of Microbiology.

[25]  I. Marison,et al.  Optimisation of culture conditions with respect to biotin requirement for the production of recombinant avidin in Pichia pastoris. , 2007, Journal of biotechnology.

[26]  W. Babel,et al.  Calorimetrically recognized maximum yield of poly-3-hydroxybutyrate (PHB) continuously synthesized from toxic substrates. , 2000, Journal of biotechnology.

[27]  A. Daugulis,et al.  Mixed-feed exponential feeding for fed-batch culture of recombinant methylotrophic yeast , 2000, Biotechnology Letters.

[28]  J. Cregg,et al.  Functional characterization of the two alcohol oxidase genes from the yeast Pichia pastoris , 1989, Molecular and cellular biology.

[29]  Ian W. Marison,et al.  Quantitative characterization of the regulation of the synthesis of alcohol oxidase and of the expression of recombinant avidin in a Pichia pastoris Mut+ strain , 2006 .

[30]  X. Liu,et al.  Biosynthetic production of type II fish antifreeze protein: fermentation by Pichia pastoris , 1997, Applied Microbiology and Biotechnology.

[31]  M. Meagher,et al.  High cell-density fermentation. , 1998, Methods in molecular biology.

[32]  T. Gingeras,et al.  Expression of the lacZ gene from two methanol-regulated promoters in Pichia pastoris. , 1987, Nucleic acids research.

[33]  W. Babel,et al.  The auxiliary substrate concept — an approach for overcoming limits of microbial performances , 1993 .

[34]  G. Stephanopoulos,et al.  Metabolic Engineering: Principles And Methodologies , 1998 .

[35]  R. Fischer,et al.  Analysis of single-chain antibody production in Pichia pastoris using on-line methanol control in fed-batch and mixed-feed fermentations. , 2001, Biotechnology and bioengineering.

[36]  T. Omasa,et al.  Effect of methanol concentration on the production of human β2-glycoprotein I domain V by a recombinant Pichia pastoris: A simple system for the control of methanol concentration using a semiconductor gas sensor , 1998 .

[37]  CHAPTER 4 – Material Balances and Data Consistency , 1998 .

[38]  U. von Stockar,et al.  Systematic errors in data evaluation due to ethanol stripping and water vaporization. , 1998, Biotechnology and bioengineering.

[39]  G. Stephanopoulos,et al.  Application of macroscopic balances to the identification of gross measurement errors , 1983, Biotechnology and bioengineering.

[40]  I. Marison,et al.  On-line detection of baseline variations through torque measurements in isothermal reaction calorimeters☆ , 1995 .

[41]  Ian W. Marison,et al.  Biological reaction calorimetry: development of high sensitivity bio-calorimeters , 1998 .