A study on 3D classical versus GAN-based augmentation for MRI brain image to predict the diagnosis of dementia with Lewy bodies and Alzheimer's disease in a European multi-center study

Every year around 10 million people are diagnosed with dementia worldwide. Higher life expectancy and population growth could inflate this number even further in the near future. Alzheimer’s disease (AD) is one of the primary and most frequently diagnosed dementia disease in elderly subjects. On the other hand, dementia with Lewy Bodies (DLB) is the third most common cause of dementia. A timely and accurate diagnosis of dementia is critical for patients’ management and treatment. However, its diagnostic is often challenging due to overlapping symptoms between the different forms of thee disease. Deep learning (DL) combined with magnetic resonance imaging (MRI) has shown potential improving the diagnostic accuracy of several neurodegenerative diseases. In spite of it, DL methods heavily rely on the availability of annotated data. Classic augmentation techniques such as translation are commonly used to increase data availability. In addition, synthetic samples obtained through generative adversarial networks (GAN) are becoming an alternative to classic augmentation. Such techniques are well-known and explored for 2D images, but little is known about their effects in a 3D setting. In this work, we explore the effects of 3D classic augmentation and 3D GAN-based augmentation to classify between AD, DLB and control subjects.

[1]  Jian Sun,et al.  Deep Residual Learning for Image Recognition , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[2]  Gihyun Kwon,et al.  Generation of 3D Brain MRI Using Auto-Encoding Generative Adversarial Networks , 2019, MICCAI.

[3]  C. Brayne,et al.  A systematic review of prevalence and incidence studies of dementia with Lewy bodies. , 2005, Age and ageing.

[4]  Morten Goodwin Olsen,et al.  Improving Prostate Whole Gland Segmentation In T2-Weighted MRI With Synthetically Generated Data , 2021, 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI).

[5]  Kilian Q. Weinberger,et al.  Densely Connected Convolutional Networks , 2016, 2017 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[6]  John-Paul Taylor,et al.  Data‐assisted differential diagnosis of dementia by deep neural networks using MRI: A study from the European DLB consortium , 2020 .

[7]  Dan J Stein,et al.  Global, regional, and national burden of Alzheimer's disease and other dementias, 1990–2016: a systematic analysis for the Global Burden of Disease Study 2016 , 2019, The Lancet Neurology.

[8]  T. Noguchi,et al.  Differentiating Dementia with Lewy Bodies and Alzheimer's Disease by Deep Learning to Structural MRI , 2021, Journal of neuroimaging : official journal of the American Society of Neuroimaging.

[9]  Stephen M Smith,et al.  Fast robust automated brain extraction , 2002, Human brain mapping.

[10]  E. Mori [Dementia with Lewy bodies]. , 2000, Nihon Ronen Igakkai zasshi. Japanese journal of geriatrics.

[11]  C. Mathers,et al.  Global prevalence of dementia: a Delphi consensus study , 2005, The Lancet.

[12]  S. Aoki,et al.  Differentiating Alzheimer’s Disease from Dementia with Lewy Bodies Using a Deep Learning Technique Based on Structural Brain Connectivity , 2018, Magnetic resonance in medical sciences : MRMS : an official journal of Japan Society of Magnetic Resonance in Medicine.

[13]  Yiming Ding,et al.  A Deep Learning Model to Predict a Diagnosis of Alzheimer Disease by Using 18F-FDG PET of the Brain. , 2019, Radiology.

[14]  Frederik Barkhof,et al.  Patterns of atrophy in pathologically confirmed dementias: a voxelwise analysis , 2017, Journal of Neurology, Neurosurgery, and Psychiatry.

[15]  Muazzam Maqsood,et al.  A Deep Siamese Convolution Neural Network for Multi-Class Classification of Alzheimer Disease , 2020, Brain sciences.