Speckle noise reduction algorithm for optical coherence tomography based on interval type II fuzzy set.

A novel speckle reduction technique based on soft thresholding of wavelet coefficients using interval type II fuzzy system was developed for reducing speckle noise in Optical Coherence Tomography images. The proposed algorithm is an extension of a recently published method for filtering additive Gaussian noise by use of type I fuzzy system. Unlike type I, interval type II fuzzy based thresholding filter considers the uncertainty in the calculated threshold and the wavelet coefficient is adjusted based on this uncertainty. A single parameter controls the signal-to-noise (SNR) improvement. Application of this novel algorithm to optical coherence tomograms acquired in-vivo from a human finger tip show reduction in the speckle noise with little edge blurring and image SNR improvement of about 10dB. Comparison with adaptive Wiener and adaptive Lee filters, applied to the same image, demonstrated the superior performance of the fuzzy type II algorithm in terms of image metrics improvement.

[1]  J. Schmitt,et al.  Speckle in optical coherence tomography. , 1999, Journal of biomedical optics.

[2]  Hamid R. Tizhoosh,et al.  Image thresholding using type II fuzzy sets , 2005, Pattern Recognit..

[3]  S. Gupta,et al.  Wavelet-based statistical approach for speckle reduction in medical ultrasound images , 2003, Medical and Biological Engineering and Computing.

[4]  Ruikang K. Wang Reduction of speckle noise for optical coherence tomography by the use of nonlinear anisotropic diffusion , 2005, SPIE BiOS.

[5]  Tat Soon Yeo,et al.  Adaptive filtering algorithms for SAR speckle reduction , 1996, IGARSS '96. 1996 International Geoscience and Remote Sensing Symposium.

[6]  Aleksandra Pizurica,et al.  A New Fuzzy-Based Wavelet Shrinkage Image Denoising Technique , 2006, ACIVS.

[7]  Pietro Baroni,et al.  Enhancing cognitive plausibility of uncertainty calculus: a common-sense-based approach to propagation and aggregation , 1998, IEEE Trans. Syst. Man Cybern. Part A.

[8]  V. Sadasivam,et al.  Undecimated wavelet based speckle reduction for SAR images , 2005, Pattern Recognit. Lett..

[9]  Peter E. Andersen,et al.  Speckle reduction in optical coherence tomography images of human skin by a spatial diversity method , 2007, European Conference on Biomedical Optics.

[10]  Stéphane Mallat,et al.  A Theory for Multiresolution Signal Decomposition: The Wavelet Representation , 1989, IEEE Trans. Pattern Anal. Mach. Intell..

[11]  Donald T. Miller,et al.  Speckle reduction in OCT with multimode source fiber , 2004, SPIE BiOS.

[12]  Mark E. Brezinski,et al.  Evaluation of the adaptive speckle suppression filter for coronary optical coherence tomography imaging , 2000, IEEE Transactions on Medical Imaging.

[13]  Donald T. Miller,et al.  Optical coherence tomography speckle reduction by a partially spatially coherent source. , 2005, Journal of biomedical optics.

[14]  H. L. Resnikoff,et al.  Wavelet analysis: the scalable structure of information , 1998 .

[15]  Göran Salomonsson,et al.  Image enhancement based on a nonlinear multiscale method , 1997, IEEE Trans. Image Process..

[16]  J. Fujimoto,et al.  Optical Coherence Tomography , 1991 .

[17]  W. Drexler Ultrahigh-resolution optical coherence tomography. , 2004, Journal of biomedical optics.

[18]  J. Fujimoto,et al.  Speckle reduction in optical coherence tomography images by use of a spatially adaptive wavelet filter. , 2004, Optics letters.

[19]  B. Vakoc,et al.  Angle-resolved optical coherence tomography with sequential angular selectivity for speckle reduction. , 2007, Optics express.

[20]  Aydogan Ozcan,et al.  Speckle reduction in optical coherence tomography images using digital filtering. , 2007, Journal of the Optical Society of America. A, Optics, image science, and vision.